RNA–Protein interactions for RNA: ENST00000579814.1

LIMD2-208, Transcript of LIM domain containing 2, humanhuman

TSL 2

Gene LIMD2, Length 709 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2-208ENST00000579814 TMEM131LA2VDJ0 1609 aa39.16■■■■□ 3.86
LIMD2-208ENST00000579814 PLEKHG1Q9ULL1 1385 aa39.12■■■■□ 3.85
LIMD2-208ENST00000579814 SENP3Q9H4L4 574 aaPredicted RBP39.11■■■■□ 3.85
LIMD2-208ENST00000579814 ACIN1Q9UKV3 1341 aaKnown RBP39.11■■■■□ 3.85
LIMD2-208ENST00000579814 TOM1O60784 492 aa39.1■■■■□ 3.85
LIMD2-208ENST00000579814 NUTM2DQ5VT03 806 aaPredicted RBP39.1■■■■□ 3.85
LIMD2-208ENST00000579814 KCNA6P17658 529 aa39.08■■■■□ 3.85
LIMD2-208ENST00000579814 ZNF326Q5BKZ1 582 aaKnown RBP39.08■■■■□ 3.85
LIMD2-208ENST00000579814 SETD5Q9C0A6 1442 aa39.05■■■■□ 3.84
LIMD2-208ENST00000579814 LRRC7Q96NW7 1537 aa39.04■■■■□ 3.84
LIMD2-208ENST00000579814 MPHOSPH9Q99550 1183 aa39.03■■■■□ 3.84
LIMD2-208ENST00000579814 TBX22Q9Y458 520 aa39.03■■■■□ 3.84
LIMD2-208ENST00000579814 SPHKAPQ2M3C7 1700 aa39.02■■■■□ 3.84
LIMD2-208ENST00000579814 TRPM2O94759 1503 aa39■■■■□ 3.83
LIMD2-208ENST00000579814 FOXD1Q16676 465 aa38.98■■■■□ 3.83
LIMD2-208ENST00000579814 MYO5BQ9ULV0 1848 aa38.98■■■■□ 3.83
LIMD2-208ENST00000579814 SCAF1Q9H7N4 1312 aaKnown RBP38.97■■■■□ 3.83
LIMD2-208ENST00000579814 PIP4K2BP78356 416 aa38.97■■■■□ 3.83
LIMD2-208ENST00000579814 STRCP1A6NGW2 1772 aa38.95■■■■□ 3.83
LIMD2-208ENST00000579814 PROSER2Q86WR7 435 aaPredicted RBP38.95■■■■□ 3.83
LIMD2-208ENST00000579814 CLTCL1P53675 1640 aa38.9■■■■□ 3.82
LIMD2-208ENST00000579814 ADAMTS13Q76LX8 1427 aa38.89■■■■□ 3.82
LIMD2-208ENST00000579814 TMEM94Q12767 1356 aa38.88■■■■□ 3.81
LIMD2-208ENST00000579814 RAB3GAP2Q9H2M9 1393 aa38.88■■■■□ 3.81
LIMD2-208ENST00000579814 RBM33Q96EV2 1170 aaKnown RBP38.83■■■■□ 3.81
LIMD2-208ENST00000579814 RPGRIP1LQ68CZ1 1315 aa38.83■■■■□ 3.81
LIMD2-208ENST00000579814 PIK3R4Q99570 1358 aa38.82■■■■□ 3.81
LIMD2-208ENST00000579814 VGFO15240 615 aaPredicted RBP38.82■■■■□ 3.8
LIMD2-208ENST00000579814 NKTRP30414 1462 aaKnown RBP38.81■■■■□ 3.8
LIMD2-208ENST00000579814 CCDC144AA2RUR9 1427 aa38.8■■■■□ 3.8
LIMD2-208ENST00000579814 HRCP23327 699 aa38.77■■■■□ 3.8
LIMD2-208ENST00000579814 DIP2AQ14689 1571 aa38.77■■■■□ 3.8
LIMD2-208ENST00000579814 NWD1Q149M9 1564 aa38.77■■■■□ 3.8
LIMD2-208ENST00000579814 AMOTL2Q9Y2J4 779 aa38.75■■■■□ 3.79
LIMD2-208ENST00000579814 HSPA1LP34931 641 aa38.74■■■■□ 3.79
LIMD2-208ENST00000579814 NEXMIFQ5QGS0 1516 aa38.73■■■■□ 3.79
LIMD2-208ENST00000579814 KIF1BO60333 1816 aa38.73■■■■□ 3.79
LIMD2-208ENST00000579814 RGL3Q3MIN7 710 aa38.7■■■■□ 3.79
LIMD2-208ENST00000579814 ALKQ9UM73 1620 aa38.7■■■■□ 3.79
LIMD2-208ENST00000579814 SETBP1Q9Y6X0 1596 aa38.7■■■■□ 3.79
LIMD2-208ENST00000579814 MSH6P52701 1360 aa38.69■■■■□ 3.78
LIMD2-208ENST00000579814 C14orf37Q86TY3 774 aa38.67■■■■□ 3.78
LIMD2-208ENST00000579814 CHD2O14647 1828 aaKnown RBP38.66■■■■□ 3.78
LIMD2-208ENST00000579814 NCOA3Q9Y6Q9 1424 aa38.65■■■■□ 3.78
LIMD2-208ENST00000579814 METP08581 1390 aa38.65■■■■□ 3.78
LIMD2-208ENST00000579814 PTPRUQ92729 1446 aa38.64■■■■□ 3.78
LIMD2-208ENST00000579814 XIRP1Q702N8 1843 aaKnown RBP38.6■■■■□ 3.77
LIMD2-208ENST00000579814 SPATA31E1Q6ZUB1 1445 aa38.6■■■■□ 3.77
LIMD2-208ENST00000579814 NRXN3Q9Y4C0 1643 aa38.6■■■■□ 3.77
LIMD2-208ENST00000579814 C19orf44Q9H6X5 657 aa38.58■■■■□ 3.77
LIMD2-208ENST00000579814 ANKRD30BQ9BXX2 1392 aa38.57■■■■□ 3.76
LIMD2-208ENST00000579814 FAM135BQ49AJ0 1406 aa38.56■■■■□ 3.76
LIMD2-208ENST00000579814 SLAIN2Q9P270 581 aa38.56■■■■□ 3.76
LIMD2-208ENST00000579814 ATF3P18847 181 aa38.52■■■■□ 3.76
LIMD2-208ENST00000579814 CADPS2Q86UW7 1296 aa38.52■■■■□ 3.76
LIMD2-208ENST00000579814 ADGRF5Q8IZF2 1346 aa38.52■■■■□ 3.76
LIMD2-208ENST00000579814 DISP3Q9P2K9 1392 aa38.48■■■■□ 3.75
LIMD2-208ENST00000579814 PPLO60437 1756 aa38.42■■■■□ 3.74
LIMD2-208ENST00000579814 XRN1Q8IZH2 1706 aaKnown RBP38.41■■■■□ 3.74
LIMD2-208ENST00000579814 DCCP43146 1447 aa38.33■■■■□ 3.73
LIMD2-208ENST00000579814 ROBO2Q9HCK4 1378 aa38.32■■■■□ 3.73
LIMD2-208ENST00000579814 PTCH1Q13635 1447 aa38.32■■■■□ 3.73
LIMD2-208ENST00000579814 PIK3C2GO75747 1445 aa38.31■■■■□ 3.72
LIMD2-208ENST00000579814 STK26Q9P289 416 aa38.3■■■■□ 3.72
LIMD2-208ENST00000579814 TMEM132EQ6IEE7 984 aa38.29■■■■□ 3.72
LIMD2-208ENST00000579814 C14orf93Q9H972 538 aaKnown RBP38.29■■■■□ 3.72
LIMD2-208ENST00000579814 ROBO1Q9Y6N7 1651 aa38.29■■■■□ 3.72
LIMD2-208ENST00000579814 SIPA1L2Q9P2F8 1722 aaPredicted RBP38.29■■■■□ 3.72
LIMD2-208ENST00000579814 ADGRL3Q9HAR2 1447 aa38.29■■■■□ 3.72
LIMD2-208ENST00000579814 PRAG1Q86YV5 1406 aa38.28■■■■□ 3.72
LIMD2-208ENST00000579814 SETD1AO15047 1707 aaKnown RBP38.26■■■■□ 3.71
LIMD2-208ENST00000579814 MYOM2P54296 1465 aa38.24■■■■□ 3.71
LIMD2-208ENST00000579814 LRPPRCP42704 1394 aaKnown RBP38.24■■■■□ 3.71
LIMD2-208ENST00000579814 STAC3Q96MF2 364 aa38.24■■■■□ 3.71
LIMD2-208ENST00000579814 CFAP70Q5T0N1 1121 aa38.23■■■■□ 3.71
LIMD2-208ENST00000579814 DCAF11Q8TEB1 546 aa38.23■■■■□ 3.71
LIMD2-208ENST00000579814 KDM2AQ9Y2K7 1162 aa38.23■■■■□ 3.71
LIMD2-208ENST00000579814 IFT172Q9UG01 1749 aa38.23■■■■□ 3.71
LIMD2-208ENST00000579814 ABCC11Q96J66 1382 aa38.21■■■■□ 3.71
LIMD2-208ENST00000579814 BRINP3Q76B58 766 aa38.21■■■■□ 3.71
LIMD2-208ENST00000579814 NRXN1Q9ULB1 1477 aa38.21■■■■□ 3.71
LIMD2-208ENST00000579814 MST1RQ04912 1400 aa38.18■■■■□ 3.7
LIMD2-208ENST00000579814 DHX57Q6P158 1386 aaKnown RBP38.16■■■■□ 3.7
LIMD2-208ENST00000579814 TECPR2O15040 1411 aa38.15■■■■□ 3.7
LIMD2-208ENST00000579814 WAPLQ7Z5K2 1190 aa38.15■■■■□ 3.7
LIMD2-208ENST00000579814 YTHDC2Q9H6S0 1430 aaKnown RBP38.14■■■■□ 3.7
LIMD2-208ENST00000579814 SIRT1Q96EB6 747 aa38.13■■■■□ 3.69
LIMD2-208ENST00000579814 PHF23Q9BUL5 403 aaPredicted RBP38.13■■■■□ 3.69
LIMD2-208ENST00000579814 MED1Q15648 1581 aaPredicted RBP38.13■■■■□ 3.69
LIMD2-208ENST00000579814 JCADQ9P266 1359 aa38.09■■■■□ 3.69
LIMD2-208ENST00000579814 ASXL1Q8IXJ9 1541 aa38.09■■■■□ 3.69
LIMD2-208ENST00000579814 ILDR2Q71H61 639 aa38.09■■■■□ 3.69
LIMD2-208ENST00000579814 TRIM26Q12899 539 aaPredicted RBP38.08■■■■□ 3.69
LIMD2-208ENST00000579814 C1orf167Q5SNV9 1468 aa38.06■■■■□ 3.68
LIMD2-208ENST00000579814 NALCNQ8IZF0 1738 aa38.05■■■■□ 3.68
LIMD2-208ENST00000579814 PLEKHH1Q9ULM0 1364 aa38.04■■■■□ 3.68
LIMD2-208ENST00000579814 PHLPP1O60346 1717 aa38.04■■■■□ 3.68
LIMD2-208ENST00000579814 AHDC1Q5TGY3 1603 aaPredicted RBP38.01■■■■□ 3.68
LIMD2-208ENST00000579814 ORAI2Q96SN7 254 aa38■■■■□ 3.67
LIMD2-208ENST00000579814 LAMC1P11047 1609 aa37.99■■■■□ 3.67
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms