RNA–Protein interactions for RNA: ENST00000579727.5

RARA-209, Transcript of retinoic acid receptor alpha, humanhuman

TSL 4

Gene RARA, Length 564 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RARA-209ENST00000579727 TMEM2Q9UHN6 1383 aa24.33■■□□□ 1.49
RARA-209ENST00000579727 LTKP29376 864 aa24.31■■□□□ 1.48
RARA-209ENST00000579727 MED14O60244 1454 aa24.31■■□□□ 1.48
RARA-209ENST00000579727 SCAF1Q9H7N4 1312 aaKnown RBP24.31■■□□□ 1.48
RARA-209ENST00000579727 PIP4K2BP78356 416 aa24.3■■□□□ 1.48
RARA-209ENST00000579727 TXNDC2Q86VQ3 553 aa24.3■■□□□ 1.48
RARA-209ENST00000579727 MPHOSPH9Q99550 1183 aa24.3■■□□□ 1.48
RARA-209ENST00000579727 KIF1BO60333 1816 aa24.27■■□□□ 1.48
RARA-209ENST00000579727 SENP3Q9H4L4 574 aaPredicted RBP24.27■■□□□ 1.48
RARA-209ENST00000579727 EID1Q9Y6B2 187 aa24.27■■□□□ 1.48
RARA-209ENST00000579727 ALKQ9UM73 1620 aa24.27■■□□□ 1.48
RARA-209ENST00000579727 RIMS2Q9UQ26 1411 aa24.26■■□□□ 1.47
RARA-209ENST00000579727 CPS1P31327 1500 aa24.25■■□□□ 1.47
RARA-209ENST00000579727 ZFYVE9O95405 1425 aa24.24■■□□□ 1.47
RARA-209ENST00000579727 NUTM2DQ5VT03 806 aaPredicted RBP24.23■■□□□ 1.47
RARA-209ENST00000579727 TOM1O60784 492 aa24.2■■□□□ 1.46
RARA-209ENST00000579727 ACIN1Q9UKV3 1341 aaKnown RBP24.19■■□□□ 1.46
RARA-209ENST00000579727 PPP1R15AO75807 674 aaPredicted RBP24.19■■□□□ 1.46
RARA-209ENST00000579727 ZNF326Q5BKZ1 582 aaKnown RBP24.19■■□□□ 1.46
RARA-209ENST00000579727 STRCP1A6NGW2 1772 aa24.18■■□□□ 1.46
RARA-209ENST00000579727 BCANQ96GW7 911 aa24.17■■□□□ 1.46
RARA-209ENST00000579727 PHF23Q9BUL5 403 aaPredicted RBP24.16■■□□□ 1.46
RARA-209ENST00000579727 CCDC144AA2RUR9 1427 aa24.16■■□□□ 1.46
RARA-209ENST00000579727 NEXMIFQ5QGS0 1516 aa24.15■■□□□ 1.46
RARA-209ENST00000579727 SLC26A8Q96RN1 970 aa24.14■■□□□ 1.45
RARA-209ENST00000579727 PLEKHG1Q9ULL1 1385 aa24.13■■□□□ 1.45
RARA-209ENST00000579727 HRCP23327 699 aa24.12■■□□□ 1.45
RARA-209ENST00000579727 HDGFP51858 240 aaKnown RBP24.11■■□□□ 1.45
RARA-209ENST00000579727 TRIM26Q12899 539 aaPredicted RBP24.11■■□□□ 1.45
RARA-209ENST00000579727 ABCF1Q8NE71 845 aaKnown RBP eCLIP24.11■■□□□ 1.45
RARA-209ENST00000579727 PPLO60437 1756 aa24.08■■□□□ 1.45
RARA-209ENST00000579727 NRXN3Q9Y4C0 1643 aa24.08■■□□□ 1.45
RARA-209ENST00000579727 ADAMTS13Q76LX8 1427 aa24.05■■□□□ 1.44
RARA-209ENST00000579727 IFT172Q9UG01 1749 aa24.04■■□□□ 1.44
RARA-209ENST00000579727 SPATA31E1Q6ZUB1 1445 aa24.04■■□□□ 1.44
RARA-209ENST00000579727 RGL3Q3MIN7 710 aa24.04■■□□□ 1.44
RARA-209ENST00000579727 ANKRD30BQ9BXX2 1392 aa24.03■■□□□ 1.44
RARA-209ENST00000579727 DIP2AQ14689 1571 aa24.02■■□□□ 1.44
RARA-209ENST00000579727 SETBP1Q9Y6X0 1596 aa24.02■■□□□ 1.44
RARA-209ENST00000579727 NWD1Q149M9 1564 aa24.01■■□□□ 1.43
RARA-209ENST00000579727 RGS17Q9UGC6 210 aaPredicted RBP24.01■■□□□ 1.43
RARA-209ENST00000579727 CHD2O14647 1828 aaKnown RBP24■■□□□ 1.43
RARA-209ENST00000579727 LRRC7Q96NW7 1537 aa24■■□□□ 1.43
RARA-209ENST00000579727 XIRP1Q702N8 1843 aaKnown RBP23.99■■□□□ 1.43
RARA-209ENST00000579727 RPGRIP1LQ68CZ1 1315 aa23.97■■□□□ 1.43
RARA-209ENST00000579727 KCNA6P17658 529 aa23.96■■□□□ 1.43
RARA-209ENST00000579727 TBX22Q9Y458 520 aa23.96■■□□□ 1.43
RARA-209ENST00000579727 SETD1AO15047 1707 aaKnown RBP23.95■■□□□ 1.42
RARA-209ENST00000579727 RBM33Q96EV2 1170 aaKnown RBP23.94■■□□□ 1.42
RARA-209ENST00000579727 VGFO15240 615 aaPredicted RBP23.93■■□□□ 1.42
RARA-209ENST00000579727 ADGRF5Q8IZF2 1346 aa23.92■■□□□ 1.42
RARA-209ENST00000579727 NKTRP30414 1462 aaKnown RBP23.92■■□□□ 1.42
RARA-209ENST00000579727 PTPRUQ92729 1446 aa23.92■■□□□ 1.42
RARA-209ENST00000579727 METP08581 1390 aa23.91■■□□□ 1.42
RARA-209ENST00000579727 PROSER2Q86WR7 435 aaPredicted RBP23.89■■□□□ 1.41
RARA-209ENST00000579727 XRN1Q8IZH2 1706 aaKnown RBP23.89■■□□□ 1.41
RARA-209ENST00000579727 TMEM94Q12767 1356 aa23.89■■□□□ 1.41
RARA-209ENST00000579727 DHX57Q6P158 1386 aaKnown RBP23.88■■□□□ 1.41
RARA-209ENST00000579727 PIK3R4Q99570 1358 aa23.87■■□□□ 1.41
RARA-209ENST00000579727 AMOTL2Q9Y2J4 779 aa23.86■■□□□ 1.41
RARA-209ENST00000579727 MYOM2P54296 1465 aa23.85■■□□□ 1.41
RARA-209ENST00000579727 PIK3C2GO75747 1445 aa23.84■■□□□ 1.41
RARA-209ENST00000579727 PCGF6Q9BYE7 350 aa23.83■■□□□ 1.41
RARA-209ENST00000579727 ASXL1Q8IXJ9 1541 aa23.81■■□□□ 1.4
RARA-209ENST00000579727 POTEAQ6S8J7 498 aa23.81■■□□□ 1.4
RARA-209ENST00000579727 KDM2AQ9Y2K7 1162 aa23.81■■□□□ 1.4
RARA-209ENST00000579727 NRXN1Q9ULB1 1477 aa23.81■■□□□ 1.4
RARA-209ENST00000579727 DCAF11Q8TEB1 546 aa23.8■■□□□ 1.4
RARA-209ENST00000579727 SIN3AQ96ST3 1273 aa23.79■■□□□ 1.4
RARA-209ENST00000579727 LAMC1P11047 1609 aa23.77■■□□□ 1.4
RARA-209ENST00000579727 C14orf37Q86TY3 774 aa23.76■■□□□ 1.39
RARA-209ENST00000579727 TMEM132EQ6IEE7 984 aa23.75■■□□□ 1.39
RARA-209ENST00000579727 MSH6P52701 1360 aa23.75■■□□□ 1.39
RARA-209ENST00000579727 SIPA1L2Q9P2F8 1722 aaPredicted RBP23.74■■□□□ 1.39
RARA-209ENST00000579727 NEUROD1Q13562 356 aa23.74■■□□□ 1.39
RARA-209ENST00000579727 CFAP70Q5T0N1 1121 aa23.74■■□□□ 1.39
RARA-209ENST00000579727 NALCNQ8IZF0 1738 aa23.73■■□□□ 1.39
RARA-209ENST00000579727 ROBO1Q9Y6N7 1651 aa23.73■■□□□ 1.39
RARA-209ENST00000579727 STK26Q9P289 416 aa23.72■■□□□ 1.39
RARA-209ENST00000579727 ROBO2Q9HCK4 1378 aa23.72■■□□□ 1.39
RARA-209ENST00000579727 KNDC1Q76NI1 1749 aa23.71■■□□□ 1.39
RARA-209ENST00000579727 PTCH1Q13635 1447 aa23.71■■□□□ 1.39
RARA-209ENST00000579727 C14orf93Q9H972 538 aaKnown RBP23.7■■□□□ 1.38
RARA-209ENST00000579727 FAM135BQ49AJ0 1406 aa23.69■■□□□ 1.38
RARA-209ENST00000579727 NCOA3Q9Y6Q9 1424 aa23.68■■□□□ 1.38
RARA-209ENST00000579727 YTHDC2Q9H6S0 1430 aaKnown RBP23.67■■□□□ 1.38
RARA-209ENST00000579727 PRAG1Q86YV5 1406 aa23.67■■□□□ 1.38
RARA-209ENST00000579727 LRPPRCP42704 1394 aaKnown RBP23.66■■□□□ 1.38
RARA-209ENST00000579727 ADGRB1O14514 1584 aa23.65■■□□□ 1.38
RARA-209ENST00000579727 ADGRL3Q9HAR2 1447 aa23.65■■□□□ 1.38
RARA-209ENST00000579727 TECPR2O15040 1411 aa23.63■■□□□ 1.37
RARA-209ENST00000579727 L3MBTL2Q969R5 705 aa23.63■■□□□ 1.37
RARA-209ENST00000579727 C19orf44Q9H6X5 657 aa23.63■■□□□ 1.37
RARA-209ENST00000579727 PLEKHH1Q9ULM0 1364 aa23.62■■□□□ 1.37
RARA-209ENST00000579727 ATF3P18847 181 aa23.61■■□□□ 1.37
RARA-209ENST00000579727 WAPLQ7Z5K2 1190 aa23.61■■□□□ 1.37
RARA-209ENST00000579727 ABCC11Q96J66 1382 aa23.61■■□□□ 1.37
RARA-209ENST00000579727 PHLPP1O60346 1717 aa23.61■■□□□ 1.37
RARA-209ENST00000579727 STAC3Q96MF2 364 aa23.6■■□□□ 1.37
RARA-209ENST00000579727 KIAA1210Q9ULL0 1709 aa23.59■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms