RNA–Protein interactions for RNA: ENST00000579308.1

CSNK1D-210, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 598 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-210ENST00000579308 RGS17Q9UGC6 210 aaPredicted RBP16.47■□□□□ 0.23
CSNK1D-210ENST00000579308 ZFYVE9O95405 1425 aa16.46■□□□□ 0.23
CSNK1D-210ENST00000579308 HDGFP51858 240 aaKnown RBP16.45■□□□□ 0.22
CSNK1D-210ENST00000579308 XIRP1Q702N8 1843 aaKnown RBP16.45■□□□□ 0.22
CSNK1D-210ENST00000579308 ROCK1Q13464 1354 aa16.44■□□□□ 0.22
CSNK1D-210ENST00000579308 PLEKHG1Q9ULL1 1385 aa16.44■□□□□ 0.22
CSNK1D-210ENST00000579308 TBX22Q9Y458 520 aa16.44■□□□□ 0.22
CSNK1D-210ENST00000579308 BCANQ96GW7 911 aa16.43■□□□□ 0.22
CSNK1D-210ENST00000579308 RIMS2Q9UQ26 1411 aa16.43■□□□□ 0.22
CSNK1D-210ENST00000579308 NKTRP30414 1462 aaKnown RBP16.42■□□□□ 0.22
CSNK1D-210ENST00000579308 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.41■□□□□ 0.22
CSNK1D-210ENST00000579308 SLAIN2Q9P270 581 aa16.41■□□□□ 0.22
CSNK1D-210ENST00000579308 NWD1Q149M9 1564 aa16.4■□□□□ 0.22
CSNK1D-210ENST00000579308 PPP1R15AO75807 674 aaPredicted RBP16.4■□□□□ 0.22
CSNK1D-210ENST00000579308 TMEM131LA2VDJ0 1609 aa16.38■□□□□ 0.21
CSNK1D-210ENST00000579308 MSH6P52701 1360 aa16.38■□□□□ 0.21
CSNK1D-210ENST00000579308 CHGAP10645 457 aaKnown RBP16.37■□□□□ 0.21
CSNK1D-210ENST00000579308 UNC13BO14795 1591 aa16.37■□□□□ 0.21
CSNK1D-210ENST00000579308 NUP155O75694 1391 aa16.37■□□□□ 0.21
CSNK1D-210ENST00000579308 ADAMTS13Q76LX8 1427 aa16.36■□□□□ 0.21
CSNK1D-210ENST00000579308 NCOA3Q9Y6Q9 1424 aa16.36■□□□□ 0.21
CSNK1D-210ENST00000579308 NUTM2DQ5VT03 806 aaPredicted RBP16.36■□□□□ 0.21
CSNK1D-210ENST00000579308 MSH5O43196 834 aa16.34■□□□□ 0.21
CSNK1D-210ENST00000579308 POTEAQ6S8J7 498 aa16.34■□□□□ 0.21
CSNK1D-210ENST00000579308 ITGAEP38570 1179 aa16.33■□□□□ 0.2
CSNK1D-210ENST00000579308 PIK3R4Q99570 1358 aa16.33■□□□□ 0.2
CSNK1D-210ENST00000579308 ROBO1Q9Y6N7 1651 aa16.33■□□□□ 0.2
CSNK1D-210ENST00000579308 C19orf44Q9H6X5 657 aa16.32■□□□□ 0.2
CSNK1D-210ENST00000579308 E9PCH4 1651 aa16.31■□□□□ 0.2
CSNK1D-210ENST00000579308 GCC2Q8IWJ2 1684 aa16.31■□□□□ 0.2
CSNK1D-210ENST00000579308 PPARGC1BQ86YN6 1023 aaKnown RBP16.31■□□□□ 0.2
CSNK1D-210ENST00000579308 IQGAP3Q86VI3 1631 aa16.3■□□□□ 0.2
CSNK1D-210ENST00000579308 AMOTL2Q9Y2J4 779 aa16.3■□□□□ 0.2
CSNK1D-210ENST00000579308 CHD2O14647 1828 aaKnown RBP16.3■□□□□ 0.2
CSNK1D-210ENST00000579308 JCADQ9P266 1359 aa16.29■□□□□ 0.2
CSNK1D-210ENST00000579308 CADPS2Q86UW7 1296 aa16.29■□□□□ 0.2
CSNK1D-210ENST00000579308 MYO5BQ9ULV0 1848 aa16.29■□□□□ 0.2
CSNK1D-210ENST00000579308 PTPRUQ92729 1446 aa16.28■□□□□ 0.2
CSNK1D-210ENST00000579308 C14orf37Q86TY3 774 aa16.27■□□□□ 0.2
CSNK1D-210ENST00000579308 DIP2AQ14689 1571 aa16.26■□□□□ 0.19
CSNK1D-210ENST00000579308 ATF3P18847 181 aa16.26■□□□□ 0.19
CSNK1D-210ENST00000579308 BRINP3Q76B58 766 aa16.23■□□□□ 0.19
CSNK1D-210ENST00000579308 SPATA31A6Q5VVP1 1343 aa16.22■□□□□ 0.19
CSNK1D-210ENST00000579308 TRPM2O94759 1503 aa16.22■□□□□ 0.19
CSNK1D-210ENST00000579308 METP08581 1390 aa16.22■□□□□ 0.19
CSNK1D-210ENST00000579308 ZNF326Q5BKZ1 582 aaKnown RBP16.21■□□□□ 0.19
CSNK1D-210ENST00000579308 RRBP1Q9P2E9 1410 aaKnown RBP16.2■□□□□ 0.18
CSNK1D-210ENST00000579308 COL16A1Q07092 1604 aaPredicted RBP16.2■□□□□ 0.18
CSNK1D-210ENST00000579308 PHLPP1O60346 1717 aa16.2■□□□□ 0.18
CSNK1D-210ENST00000579308 SETBP1Q9Y6X0 1596 aa16.2■□□□□ 0.18
CSNK1D-210ENST00000579308 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.19■□□□□ 0.18
CSNK1D-210ENST00000579308 DCCP43146 1447 aa16.19■□□□□ 0.18
CSNK1D-210ENST00000579308 NAIPQ13075 1403 aa16.19■□□□□ 0.18
CSNK1D-210ENST00000579308 LRP6O75581 1613 aa16.18■□□□□ 0.18
CSNK1D-210ENST00000579308 AHDC1Q5TGY3 1603 aaPredicted RBP16.18■□□□□ 0.18
CSNK1D-210ENST00000579308 NRXN3Q9Y4C0 1643 aa16.18■□□□□ 0.18
CSNK1D-210ENST00000579308 MST1RQ04912 1400 aa16.15■□□□□ 0.18
CSNK1D-210ENST00000579308 ZNF772Q68DY9 489 aaPredicted RBP16.15■□□□□ 0.18
CSNK1D-210ENST00000579308 XRN1Q8IZH2 1706 aaKnown RBP16.14■□□□□ 0.17
CSNK1D-210ENST00000579308 SETD5Q9C0A6 1442 aa16.13■□□□□ 0.17
CSNK1D-210ENST00000579308 MEX3CQ5U5Q3 659 aaKnown RBP16.13■□□□□ 0.17
CSNK1D-210ENST00000579308 SPHKAPQ2M3C7 1700 aa16.13■□□□□ 0.17
CSNK1D-210ENST00000579308 NEXMIFQ5QGS0 1516 aa16.13■□□□□ 0.17
CSNK1D-210ENST00000579308 VGFO15240 615 aaPredicted RBP16.12■□□□□ 0.17
CSNK1D-210ENST00000579308 CLTCL1P53675 1640 aa16.12■□□□□ 0.17
CSNK1D-210ENST00000579308 ADGRL3Q9HAR2 1447 aa16.11■□□□□ 0.17
CSNK1D-210ENST00000579308 ASXL1Q8IXJ9 1541 aa16.11■□□□□ 0.17
CSNK1D-210ENST00000579308 LRRC59Q96AG4 307 aaKnown RBP16.11■□□□□ 0.17
CSNK1D-210ENST00000579308 RPGRIP1LQ68CZ1 1315 aa16.11■□□□□ 0.17
CSNK1D-210ENST00000579308 HFM1A2PYH4 1435 aa16.11■□□□□ 0.17
CSNK1D-210ENST00000579308 DDX17Q92841 729 aaKnown RBP16.1■□□□□ 0.17
CSNK1D-210ENST00000579308 TRIM52Q96A61 297 aa16.1■□□□□ 0.17
CSNK1D-210ENST00000579308 NUTM2BA6NNL0 878 aaPredicted RBP16.09■□□□□ 0.17
CSNK1D-210ENST00000579308 NUTM2EB1AL46 878 aaPredicted RBP16.09■□□□□ 0.17
CSNK1D-210ENST00000579308 NUTM2AQ8IVF1 878 aaPredicted RBP16.09■□□□□ 0.17
CSNK1D-210ENST00000579308 PIAS4Q8N2W9 510 aaPredicted RBP16.09■□□□□ 0.17
CSNK1D-210ENST00000579308 SHPRHQ149N8 1683 aa16.08■□□□□ 0.17
CSNK1D-210ENST00000579308 SLC4A1APQ9BWU0 796 aaKnown RBP16.08■□□□□ 0.16
CSNK1D-210ENST00000579308 ROBO2Q9HCK4 1378 aa16.08■□□□□ 0.16
CSNK1D-210ENST00000579308 RXRBP28702 533 aa16.07■□□□□ 0.16
CSNK1D-210ENST00000579308 C1orf167Q5SNV9 1468 aa16.06■□□□□ 0.16
CSNK1D-210ENST00000579308 PTCH1Q13635 1447 aa16.06■□□□□ 0.16
CSNK1D-210ENST00000579308 PRAG1Q86YV5 1406 aa16.06■□□□□ 0.16
CSNK1D-210ENST00000579308 UPF1Q92900 1129 aaKnown RBP eCLIP16.06■□□□□ 0.16
CSNK1D-210ENST00000579308 PNPLA6Q8IY17 1366 aa16.05■□□□□ 0.16
CSNK1D-210ENST00000579308 AFF2P51816 1311 aa16.04■□□□□ 0.16
CSNK1D-210ENST00000579308 ORAI2Q96SN7 254 aa16.04■□□□□ 0.16
CSNK1D-210ENST00000579308 SOS2Q07890 1332 aaPredicted RBP16.03■□□□□ 0.16
CSNK1D-210ENST00000579308 NHSL1Q5SYE7 1610 aa16.02■□□□□ 0.16
CSNK1D-210ENST00000579308 C8orf37Q96NL8 207 aa16.01■□□□□ 0.15
CSNK1D-210ENST00000579308 QTRT2Q9H974 415 aaKnown RBP16.01■□□□□ 0.15
CSNK1D-210ENST00000579308 CDK12Q9NYV4 1490 aaPredicted RBP16.01■□□□□ 0.15
CSNK1D-210ENST00000579308 ADGRF5Q8IZF2 1346 aa16■□□□□ 0.15
CSNK1D-210ENST00000579308 SETD1AO15047 1707 aaKnown RBP16■□□□□ 0.15
CSNK1D-210ENST00000579308 NALCNQ8IZF0 1738 aa15.99■□□□□ 0.15
CSNK1D-210ENST00000579308 KIF1BO60333 1816 aa15.98■□□□□ 0.15
CSNK1D-210ENST00000579308 RBM6P78332 1123 aaKnown RBP15.98■□□□□ 0.15
CSNK1D-210ENST00000579308 MPHOSPH9Q99550 1183 aa15.98■□□□□ 0.15
CSNK1D-210ENST00000579308 SPATA31E1Q6ZUB1 1445 aa15.97■□□□□ 0.15
CSNK1D-210ENST00000579308 LAMC1P11047 1609 aa15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms