RNA–Protein interactions for RNA: ENST00000578525.5

CDK5RAP3-208, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 564 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-208ENST00000578525 INSRP06213 1382 aa12.61□□□□□ -0.39
CDK5RAP3-208ENST00000578525 EIF3AQ14152 1382 aaKnown RBP12.61□□□□□ -0.39
CDK5RAP3-208ENST00000578525 ABCA6Q8N139 1617 aa12.61□□□□□ -0.39
CDK5RAP3-208ENST00000578525 NEO1Q92859 1461 aa12.6□□□□□ -0.39
CDK5RAP3-208ENST00000578525 UGGT1Q9NYU2 1555 aa12.6□□□□□ -0.39
CDK5RAP3-208ENST00000578525 ADGRB3O60242 1522 aa12.59□□□□□ -0.39
CDK5RAP3-208ENST00000578525 CDCA8Q53HL2 280 aa12.59□□□□□ -0.39
CDK5RAP3-208ENST00000578525 PANK3Q9H999 370 aa12.59□□□□□ -0.39
CDK5RAP3-208ENST00000578525 RNF123Q5XPI4 1314 aa12.59□□□□□ -0.39
CDK5RAP3-208ENST00000578525 NRXN1Q9ULB1 1477 aa12.59□□□□□ -0.39
CDK5RAP3-208ENST00000578525 KDM5AP29375 1690 aaKnown RBP12.57□□□□□ -0.4
CDK5RAP3-208ENST00000578525 MYOM1P52179 1685 aa12.57□□□□□ -0.4
CDK5RAP3-208ENST00000578525 BLMP54132 1417 aaPredicted RBP12.56□□□□□ -0.4
CDK5RAP3-208ENST00000578525 MYO3AQ8NEV4 1616 aa12.56□□□□□ -0.4
CDK5RAP3-208ENST00000578525 CC2D1BQ5T0F9 858 aaKnown RBP12.55□□□□□ -0.4
CDK5RAP3-208ENST00000578525 ABCC3O15438 1527 aa12.55□□□□□ -0.4
CDK5RAP3-208ENST00000578525 SETBP1Q9Y6X0 1596 aa12.55□□□□□ -0.4
CDK5RAP3-208ENST00000578525 ASXL1Q8IXJ9 1541 aa12.54□□□□□ -0.4
CDK5RAP3-208ENST00000578525 SLC24A1O60721 1099 aa12.54□□□□□ -0.4
CDK5RAP3-208ENST00000578525 CAMSAP1Q5T5Y3 1602 aa12.54□□□□□ -0.4
CDK5RAP3-208ENST00000578525 NPATQ14207 1427 aa12.54□□□□□ -0.4
CDK5RAP3-208ENST00000578525 PPLO60437 1756 aa12.53□□□□□ -0.4
CDK5RAP3-208ENST00000578525 DIP2CQ9Y2E4 1556 aa12.53□□□□□ -0.4
CDK5RAP3-208ENST00000578525 PDE3BQ13370 1112 aa12.53□□□□□ -0.4
CDK5RAP3-208ENST00000578525 ADGRF5Q8IZF2 1346 aa12.53□□□□□ -0.4
CDK5RAP3-208ENST00000578525 NPC1L1Q9UHC9 1359 aa12.53□□□□□ -0.4
CDK5RAP3-208ENST00000578525 NOS1P29475 1434 aa12.52□□□□□ -0.41
CDK5RAP3-208ENST00000578525 ERVK-7P63135 1459 aa12.52□□□□□ -0.41
CDK5RAP3-208ENST00000578525 ZC3H13Q5T200 1668 aaKnown RBP12.51□□□□□ -0.41
CDK5RAP3-208ENST00000578525 CFAP70Q5T0N1 1121 aa12.51□□□□□ -0.41
CDK5RAP3-208ENST00000578525 KNSTRNQ9Y448 316 aa12.51□□□□□ -0.41
CDK5RAP3-208ENST00000578525 RBM19Q9Y4C8 960 aaKnown RBP12.51□□□□□ -0.41
CDK5RAP3-208ENST00000578525 GLI2P10070 1586 aa12.51□□□□□ -0.41
CDK5RAP3-208ENST00000578525 RICTORQ6R327 1708 aa12.51□□□□□ -0.41
CDK5RAP3-208ENST00000578525 MYT1Q01538 1121 aa12.5□□□□□ -0.41
CDK5RAP3-208ENST00000578525 SBNO2Q9Y2G9 1366 aa12.5□□□□□ -0.41
CDK5RAP3-208ENST00000578525 PIK3C2BO00750 1634 aa12.49□□□□□ -0.41
CDK5RAP3-208ENST00000578525 PIK3C2GO75747 1445 aa12.49□□□□□ -0.41
CDK5RAP3-208ENST00000578525 RPGRIP1LQ68CZ1 1315 aa12.49□□□□□ -0.41
CDK5RAP3-208ENST00000578525 AMER1Q5JTC6 1135 aaPredicted RBP12.49□□□□□ -0.41
CDK5RAP3-208ENST00000578525 PPP2R1AP30153 589 aa12.48□□□□□ -0.41
CDK5RAP3-208ENST00000578525 B4GALNT3Q6L9W6 998 aa12.48□□□□□ -0.41
CDK5RAP3-208ENST00000578525 GGT6Q6P531 493 aa12.48□□□□□ -0.41
CDK5RAP3-208ENST00000578525 SIGLEC1Q9BZZ2 1709 aa12.48□□□□□ -0.41
CDK5RAP3-208ENST00000578525 ARHGAP31Q2M1Z3 1444 aa12.47□□□□□ -0.41
CDK5RAP3-208ENST00000578525 ADGRB1O14514 1584 aa12.47□□□□□ -0.41
CDK5RAP3-208ENST00000578525 SENP3-EIF4A1A0A087X0R7 540 aa12.46□□□□□ -0.41
CDK5RAP3-208ENST00000578525 CHGAP10645 457 aaKnown RBP12.46□□□□□ -0.41
CDK5RAP3-208ENST00000578525 QRICH2Q9H0J4 1663 aa12.45□□□□□ -0.42
CDK5RAP3-208ENST00000578525 RRP1P56182 461 aaKnown RBP12.45□□□□□ -0.42
CDK5RAP3-208ENST00000578525 C14orf93Q9H972 538 aaKnown RBP12.45□□□□□ -0.42
CDK5RAP3-208ENST00000578525 CENPJQ9HC77 1338 aaPredicted RBP12.44□□□□□ -0.42
CDK5RAP3-208ENST00000578525 NEXMIFQ5QGS0 1516 aa12.44□□□□□ -0.42
CDK5RAP3-208ENST00000578525 RAPGEF3O95398 923 aa12.44□□□□□ -0.42
CDK5RAP3-208ENST00000578525 RCAN3Q9UKA8 241 aa12.44□□□□□ -0.42
CDK5RAP3-208ENST00000578525 WDR43Q15061 677 aaKnown RBP eCLIP12.43□□□□□ -0.42
CDK5RAP3-208ENST00000578525 SALL2Q9Y467 1007 aaPredicted RBP12.42□□□□□ -0.42
CDK5RAP3-208ENST00000578525 YEATS2Q9ULM3 1422 aa12.42□□□□□ -0.42
CDK5RAP3-208ENST00000578525 CCDC136Q96JN2 1154 aa12.41□□□□□ -0.42
CDK5RAP3-208ENST00000578525 USP32Q8NFA0 1604 aa12.4□□□□□ -0.42
CDK5RAP3-208ENST00000578525 FANCIQ9NVI1 1328 aa12.4□□□□□ -0.42
CDK5RAP3-208ENST00000578525 ADAMTS8Q9UP79 889 aa12.4□□□□□ -0.42
CDK5RAP3-208ENST00000578525 PREX1Q8TCU6 1659 aa12.4□□□□□ -0.42
CDK5RAP3-208ENST00000578525 CFAP65Q6ZU64 1925 aaKnown RBP12.4□□□□□ -0.42
CDK5RAP3-208ENST00000578525 ARHGEF28Q8N1W1 1705 aaKnown RBP12.4□□□□□ -0.43
CDK5RAP3-208ENST00000578525 DIP2BQ9P265 1576 aa12.39□□□□□ -0.43
CDK5RAP3-208ENST00000578525 ZFYVE9O95405 1425 aa12.39□□□□□ -0.43
CDK5RAP3-208ENST00000578525 CDCA7LQ96GN5 454 aa12.39□□□□□ -0.43
CDK5RAP3-208ENST00000578525 RIMBP3CA6NJZ7 1639 aa12.39□□□□□ -0.43
CDK5RAP3-208ENST00000578525 RIMBP3BA6NNM3 1639 aa12.39□□□□□ -0.43
CDK5RAP3-208ENST00000578525 RIMBP3Q9UFD9 1639 aa12.39□□□□□ -0.43
CDK5RAP3-208ENST00000578525 VGFO15240 615 aaPredicted RBP12.38□□□□□ -0.43
CDK5RAP3-208ENST00000578525 TRAK1Q9UPV9 953 aa12.38□□□□□ -0.43
CDK5RAP3-208ENST00000578525 REREQ9P2R6 1566 aa12.38□□□□□ -0.43
CDK5RAP3-208ENST00000578525 PUS7Q96PZ0 661 aaKnown RBP12.37□□□□□ -0.43
CDK5RAP3-208ENST00000578525 CARD14Q9BXL6 1004 aa12.37□□□□□ -0.43
CDK5RAP3-208ENST00000578525 PLEKHH1Q9ULM0 1364 aa12.37□□□□□ -0.43
CDK5RAP3-208ENST00000578525 SLC52A1Q9NWF4 448 aa12.36□□□□□ -0.43
CDK5RAP3-208ENST00000578525 TMEM131LA2VDJ0 1609 aa12.36□□□□□ -0.43
CDK5RAP3-208ENST00000578525 TULP4Q9NRJ4 1543 aa12.36□□□□□ -0.43
CDK5RAP3-208ENST00000578525 NSD3Q9BZ95 1437 aa12.36□□□□□ -0.43
CDK5RAP3-208ENST00000578525 ZNF521Q96K83 1311 aa12.36□□□□□ -0.43
CDK5RAP3-208ENST00000578525 EXOC6Q8TAG9 804 aa12.35□□□□□ -0.43
CDK5RAP3-208ENST00000578525 ANP32EQ9BTT0 268 aa12.35□□□□□ -0.43
CDK5RAP3-208ENST00000578525 AGLP35573 1532 aa12.35□□□□□ -0.43
CDK5RAP3-208ENST00000578525 POLR3AO14802 1390 aaPredicted RBP12.34□□□□□ -0.43
CDK5RAP3-208ENST00000578525 TMEM132EQ6IEE7 984 aa12.34□□□□□ -0.43
CDK5RAP3-208ENST00000578525 MYO5BQ9ULV0 1848 aa12.33□□□□□ -0.44
CDK5RAP3-208ENST00000578525 IDI1Q13907 227 aa12.33□□□□□ -0.44
CDK5RAP3-208ENST00000578525 CYB5RLQ6IPT4 315 aa12.33□□□□□ -0.44
CDK5RAP3-208ENST00000578525 EVC2Q86UK5 1308 aa12.33□□□□□ -0.44
CDK5RAP3-208ENST00000578525 GOLGA2Q08379 1002 aa12.32□□□□□ -0.44
CDK5RAP3-208ENST00000578525 NGEFQ8N5V2 710 aa12.32□□□□□ -0.44
CDK5RAP3-208ENST00000578525 SHPRHQ149N8 1683 aa12.32□□□□□ -0.44
CDK5RAP3-208ENST00000578525 NSD2O96028 1365 aa12.31□□□□□ -0.44
CDK5RAP3-208ENST00000578525 FAM69CQ0P6D2 419 aa12.31□□□□□ -0.44
CDK5RAP3-208ENST00000578525 DUSP27Q5VZP5 1158 aa12.31□□□□□ -0.44
CDK5RAP3-208ENST00000578525 MORC1Q86VD1 984 aa12.31□□□□□ -0.44
CDK5RAP3-208ENST00000578525 CLTCQ00610 1675 aaKnown RBP12.3□□□□□ -0.44
CDK5RAP3-208ENST00000578525 SLFN5Q08AF3 891 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms