RNA–Protein interactions for RNA: ENST00000578516.1

CDC42EP4-203, Transcript of CDC42 effector protein 4, humanhuman

TSL 4

Gene CDC42EP4, Length 572 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP4-203ENST00000578516 CCDC144AA2RUR9 1427 aa32.07■■■□□ 2.72
CDC42EP4-203ENST00000578516 NEXMIFQ5QGS0 1516 aa32.06■■■□□ 2.72
CDC42EP4-203ENST00000578516 DMRT2Q9Y5R5 561 aa32.04■■■□□ 2.72
CDC42EP4-203ENST00000578516 STRCP1A6NGW2 1772 aa32.03■■■□□ 2.72
CDC42EP4-203ENST00000578516 PPLO60437 1756 aa32.03■■■□□ 2.72
CDC42EP4-203ENST00000578516 EID1Q9Y6B2 187 aa32.02■■■□□ 2.72
CDC42EP4-203ENST00000578516 ZNF326Q5BKZ1 582 aaKnown RBP32.01■■■□□ 2.71
CDC42EP4-203ENST00000578516 ANKRD30BQ9BXX2 1392 aa32.01■■■□□ 2.71
CDC42EP4-203ENST00000578516 ZNF335Q9H4Z2 1342 aaPredicted RBP32■■■□□ 2.71
CDC42EP4-203ENST00000578516 IFT172Q9UG01 1749 aa32■■■□□ 2.71
CDC42EP4-203ENST00000578516 LTBP4Q8N2S1 1624 aa31.99■■■□□ 2.71
CDC42EP4-203ENST00000578516 SPATA31E1Q6ZUB1 1445 aa31.98■■■□□ 2.71
CDC42EP4-203ENST00000578516 NRXN3Q9Y4C0 1643 aa31.97■■■□□ 2.71
CDC42EP4-203ENST00000578516 PCGF6Q9BYE7 350 aa31.97■■■□□ 2.71
CDC42EP4-203ENST00000578516 PPP1R15AO75807 674 aaPredicted RBP31.95■■■□□ 2.71
CDC42EP4-203ENST00000578516 PLEKHG1Q9ULL1 1385 aa31.93■■■□□ 2.7
CDC42EP4-203ENST00000578516 SLC26A8Q96RN1 970 aa31.92■■■□□ 2.7
CDC42EP4-203ENST00000578516 DHX57Q6P158 1386 aaKnown RBP31.92■■■□□ 2.7
CDC42EP4-203ENST00000578516 RGL3Q3MIN7 710 aa31.91■■■□□ 2.7
CDC42EP4-203ENST00000578516 BCANQ96GW7 911 aa31.88■■■□□ 2.69
CDC42EP4-203ENST00000578516 ADAMTS13Q76LX8 1427 aa31.88■■■□□ 2.69
CDC42EP4-203ENST00000578516 ABCF1Q8NE71 845 aaKnown RBP eCLIP31.86■■■□□ 2.69
CDC42EP4-203ENST00000578516 SETBP1Q9Y6X0 1596 aa31.85■■■□□ 2.69
CDC42EP4-203ENST00000578516 SETD1AO15047 1707 aaKnown RBP31.85■■■□□ 2.69
CDC42EP4-203ENST00000578516 CHD2O14647 1828 aaKnown RBP31.81■■■□□ 2.68
CDC42EP4-203ENST00000578516 HDGFP51858 240 aaKnown RBP31.8■■■□□ 2.68
CDC42EP4-203ENST00000578516 DIP2AQ14689 1571 aa31.8■■■□□ 2.68
CDC42EP4-203ENST00000578516 NWD1Q149M9 1564 aa31.78■■■□□ 2.68
CDC42EP4-203ENST00000578516 XIRP1Q702N8 1843 aaKnown RBP31.78■■■□□ 2.68
CDC42EP4-203ENST00000578516 ADGRF5Q8IZF2 1346 aa31.76■■■□□ 2.68
CDC42EP4-203ENST00000578516 CERKQ8TCT0 537 aa31.75■■■□□ 2.67
CDC42EP4-203ENST00000578516 CPS1P31327 1500 aa31.75■■■□□ 2.67
CDC42EP4-203ENST00000578516 RPGRIP1LQ68CZ1 1315 aa31.75■■■□□ 2.67
CDC42EP4-203ENST00000578516 SIN3AQ96ST3 1273 aa31.73■■■□□ 2.67
CDC42EP4-203ENST00000578516 ALKQ9UM73 1620 aa31.73■■■□□ 2.67
CDC42EP4-203ENST00000578516 PTPRUQ92729 1446 aa31.72■■■□□ 2.67
CDC42EP4-203ENST00000578516 LRRC7Q96NW7 1537 aa31.7■■■□□ 2.67
CDC42EP4-203ENST00000578516 XRN1Q8IZH2 1706 aaKnown RBP31.69■■■□□ 2.66
CDC42EP4-203ENST00000578516 MYOM2P54296 1465 aa31.69■■■□□ 2.66
CDC42EP4-203ENST00000578516 METP08581 1390 aa31.68■■■□□ 2.66
CDC42EP4-203ENST00000578516 VGFO15240 615 aaPredicted RBP31.68■■■□□ 2.66
CDC42EP4-203ENST00000578516 TBX22Q9Y458 520 aa31.68■■■□□ 2.66
CDC42EP4-203ENST00000578516 ASXL1Q8IXJ9 1541 aa31.68■■■□□ 2.66
CDC42EP4-203ENST00000578516 PIK3C2GO75747 1445 aa31.66■■■□□ 2.66
CDC42EP4-203ENST00000578516 RBM33Q96EV2 1170 aaKnown RBP31.65■■■□□ 2.66
CDC42EP4-203ENST00000578516 NRXN1Q9ULB1 1477 aa31.65■■■□□ 2.66
CDC42EP4-203ENST00000578516 KCNA6P17658 529 aa31.63■■■□□ 2.65
CDC42EP4-203ENST00000578516 NEUROD1Q13562 356 aa31.62■■■□□ 2.65
CDC42EP4-203ENST00000578516 KDM2AQ9Y2K7 1162 aa31.62■■■□□ 2.65
CDC42EP4-203ENST00000578516 NKTRP30414 1462 aaKnown RBP31.61■■■□□ 2.65
CDC42EP4-203ENST00000578516 DCAF11Q8TEB1 546 aa31.6■■■□□ 2.65
CDC42EP4-203ENST00000578516 IQSEC2Q5JU85 1478 aa31.57■■■□□ 2.64
CDC42EP4-203ENST00000578516 LAMC1P11047 1609 aa31.57■■■□□ 2.64
CDC42EP4-203ENST00000578516 PIK3R4Q99570 1358 aa31.56■■■□□ 2.64
CDC42EP4-203ENST00000578516 AMOTL2Q9Y2J4 779 aa31.55■■■□□ 2.64
CDC42EP4-203ENST00000578516 TMEM94Q12767 1356 aa31.55■■■□□ 2.64
CDC42EP4-203ENST00000578516 PROSER2Q86WR7 435 aaPredicted RBP31.52■■■□□ 2.64
CDC42EP4-203ENST00000578516 CFAP70Q5T0N1 1121 aa31.51■■■□□ 2.63
CDC42EP4-203ENST00000578516 TMEM132EQ6IEE7 984 aa31.5■■■□□ 2.63
CDC42EP4-203ENST00000578516 KNDC1Q76NI1 1749 aa31.49■■■□□ 2.63
CDC42EP4-203ENST00000578516 L3MBTL2Q969R5 705 aa31.48■■■□□ 2.63
CDC42EP4-203ENST00000578516 NALCNQ8IZF0 1738 aa31.48■■■□□ 2.63
CDC42EP4-203ENST00000578516 ADGRB1O14514 1584 aa31.46■■■□□ 2.63
CDC42EP4-203ENST00000578516 ROBO2Q9HCK4 1378 aa31.44■■■□□ 2.62
CDC42EP4-203ENST00000578516 C14orf93Q9H972 538 aaKnown RBP31.44■■■□□ 2.62
CDC42EP4-203ENST00000578516 PRAG1Q86YV5 1406 aa31.43■■■□□ 2.62
CDC42EP4-203ENST00000578516 STK26Q9P289 416 aa31.43■■■□□ 2.62
CDC42EP4-203ENST00000578516 SIPA1L2Q9P2F8 1722 aaPredicted RBP31.43■■■□□ 2.62
CDC42EP4-203ENST00000578516 ILDR1Q86SU0 546 aaPredicted RBP31.42■■■□□ 2.62
CDC42EP4-203ENST00000578516 FBXO41Q8TF61 875 aa31.42■■■□□ 2.62
CDC42EP4-203ENST00000578516 UBAP1LF5GYI3 381 aa31.41■■■□□ 2.62
CDC42EP4-203ENST00000578516 KIAA1210Q9ULL0 1709 aa31.41■■■□□ 2.62
CDC42EP4-203ENST00000578516 YTHDC2Q9H6S0 1430 aaKnown RBP31.41■■■□□ 2.62
CDC42EP4-203ENST00000578516 PTCH1Q13635 1447 aa31.4■■■□□ 2.62
CDC42EP4-203ENST00000578516 LRPPRCP42704 1394 aaKnown RBP31.39■■■□□ 2.62
CDC42EP4-203ENST00000578516 TRPM1Q7Z4N2 1603 aa31.38■■■□□ 2.61
CDC42EP4-203ENST00000578516 TONSLQ96HA7 1378 aa31.35■■■□□ 2.61
CDC42EP4-203ENST00000578516 PLEKHH1Q9ULM0 1364 aa31.35■■■□□ 2.61
CDC42EP4-203ENST00000578516 TECPR2O15040 1411 aa31.34■■■□□ 2.61
CDC42EP4-203ENST00000578516 C14orf37Q86TY3 774 aa31.34■■■□□ 2.61
CDC42EP4-203ENST00000578516 ARHGEF28Q8N1W1 1705 aaKnown RBP31.33■■■□□ 2.61
CDC42EP4-203ENST00000578516 MSH6P52701 1360 aa31.31■■■□□ 2.6
CDC42EP4-203ENST00000578516 PIP4K2BP78356 416 aa31.31■■■□□ 2.6
CDC42EP4-203ENST00000578516 CCER1Q8TC90 406 aaPredicted RBP31.31■■■□□ 2.6
CDC42EP4-203ENST00000578516 ADGRL3Q9HAR2 1447 aa31.3■■■□□ 2.6
CDC42EP4-203ENST00000578516 ABCC11Q96J66 1382 aa31.3■■■□□ 2.6
CDC42EP4-203ENST00000578516 SCAF1Q9H7N4 1312 aaKnown RBP31.29■■■□□ 2.6
CDC42EP4-203ENST00000578516 NBPF1Q3BBV0 1214 aa31.29■■■□□ 2.6
CDC42EP4-203ENST00000578516 WAPLQ7Z5K2 1190 aa31.29■■■□□ 2.6
CDC42EP4-203ENST00000578516 STAC3Q96MF2 364 aa31.29■■■□□ 2.6
CDC42EP4-203ENST00000578516 NBPF8Q3BBV2 869 aa31.28■■■□□ 2.6
CDC42EP4-203ENST00000578516 NCOA3Q9Y6Q9 1424 aa31.26■■■□□ 2.6
CDC42EP4-203ENST00000578516 DLC1Q96QB1 1528 aa31.25■■■□□ 2.59
CDC42EP4-203ENST00000578516 TOM1O60784 492 aa31.24■■■□□ 2.59
CDC42EP4-203ENST00000578516 TRAK1Q9UPV9 953 aa31.24■■■□□ 2.59
CDC42EP4-203ENST00000578516 ROBO1Q9Y6N7 1651 aa31.24■■■□□ 2.59
CDC42EP4-203ENST00000578516 SAFB2Q14151 953 aaKnown RBP eCLIP31.22■■■□□ 2.59
CDC42EP4-203ENST00000578516 FAM135BQ49AJ0 1406 aa31.19■■■□□ 2.58
CDC42EP4-203ENST00000578516 C19orf44Q9H6X5 657 aa31.19■■■□□ 2.58
CDC42EP4-203ENST00000578516 CDC42BPGQ6DT37 1551 aa31.18■■■□□ 2.58
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms