RNA–Protein interactions for RNA: ENST00000578061.5

LIMD2-202, Transcript of LIM domain containing 2, humanhuman

APPRIS P1 TSL 2 BASIC

Gene LIMD2, Length 756 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2-202ENST00000578061 ZFYVE9O95405 1425 aa31.05■■■□□ 2.56
LIMD2-202ENST00000578061 PPP1R15AO75807 674 aaPredicted RBP31.04■■■□□ 2.56
LIMD2-202ENST00000578061 SPHKAPQ2M3C7 1700 aa31.03■■■□□ 2.56
LIMD2-202ENST00000578061 SLC4A1APQ9BWU0 796 aaKnown RBP31.01■■■□□ 2.55
LIMD2-202ENST00000578061 LRRC7Q96NW7 1537 aa30.99■■■□□ 2.55
LIMD2-202ENST00000578061 HDGFP51858 240 aaKnown RBP30.99■■■□□ 2.55
LIMD2-202ENST00000578061 PLEKHG1Q9ULL1 1385 aa30.96■■■□□ 2.55
LIMD2-202ENST00000578061 ABCF1Q8NE71 845 aaKnown RBP eCLIP30.96■■■□□ 2.55
LIMD2-202ENST00000578061 SCAF1Q9H7N4 1312 aaKnown RBP30.94■■■□□ 2.54
LIMD2-202ENST00000578061 TRPM2O94759 1503 aa30.93■■■□□ 2.54
LIMD2-202ENST00000578061 PIP4K2BP78356 416 aa30.93■■■□□ 2.54
LIMD2-202ENST00000578061 CLTCL1P53675 1640 aa30.92■■■□□ 2.54
LIMD2-202ENST00000578061 FOXD1Q16676 465 aa30.92■■■□□ 2.54
LIMD2-202ENST00000578061 ZNF326Q5BKZ1 582 aaKnown RBP30.92■■■□□ 2.54
LIMD2-202ENST00000578061 TOM1O60784 492 aa30.91■■■□□ 2.54
LIMD2-202ENST00000578061 KCNA6P17658 529 aa30.91■■■□□ 2.54
LIMD2-202ENST00000578061 SETD5Q9C0A6 1442 aa30.87■■■□□ 2.53
LIMD2-202ENST00000578061 RBM33Q96EV2 1170 aaKnown RBP30.86■■■□□ 2.53
LIMD2-202ENST00000578061 MPHOSPH9Q99550 1183 aa30.84■■■□□ 2.53
LIMD2-202ENST00000578061 ADAMTS13Q76LX8 1427 aa30.83■■■□□ 2.53
LIMD2-202ENST00000578061 PROSER2Q86WR7 435 aaPredicted RBP30.83■■■□□ 2.53
LIMD2-202ENST00000578061 TBX22Q9Y458 520 aa30.83■■■□□ 2.53
LIMD2-202ENST00000578061 TMEM94Q12767 1356 aa30.82■■■□□ 2.52
LIMD2-202ENST00000578061 ALKQ9UM73 1620 aa30.82■■■□□ 2.52
LIMD2-202ENST00000578061 XIRP1Q702N8 1843 aaKnown RBP30.79■■■□□ 2.52
LIMD2-202ENST00000578061 NWD1Q149M9 1564 aa30.79■■■□□ 2.52
LIMD2-202ENST00000578061 RAB3GAP2Q9H2M9 1393 aa30.78■■■□□ 2.52
LIMD2-202ENST00000578061 KIF1BO60333 1816 aa30.77■■■□□ 2.52
LIMD2-202ENST00000578061 NEXMIFQ5QGS0 1516 aa30.75■■■□□ 2.51
LIMD2-202ENST00000578061 NKTRP30414 1462 aaKnown RBP30.75■■■□□ 2.51
LIMD2-202ENST00000578061 HSPA1LP34931 641 aa30.74■■■□□ 2.51
LIMD2-202ENST00000578061 CHD2O14647 1828 aaKnown RBP30.73■■■□□ 2.51
LIMD2-202ENST00000578061 DIP2AQ14689 1571 aa30.73■■■□□ 2.51
LIMD2-202ENST00000578061 NRXN3Q9Y4C0 1643 aa30.7■■■□□ 2.51
LIMD2-202ENST00000578061 CCDC144AA2RUR9 1427 aa30.69■■■□□ 2.5
LIMD2-202ENST00000578061 SETBP1Q9Y6X0 1596 aa30.68■■■□□ 2.5
LIMD2-202ENST00000578061 PIK3R4Q99570 1358 aa30.67■■■□□ 2.5
LIMD2-202ENST00000578061 PTPRUQ92729 1446 aa30.67■■■□□ 2.5
LIMD2-202ENST00000578061 AMOTL2Q9Y2J4 779 aa30.67■■■□□ 2.5
LIMD2-202ENST00000578061 ACIN1Q9UKV3 1341 aaKnown RBP30.67■■■□□ 2.5
LIMD2-202ENST00000578061 RGL3Q3MIN7 710 aa30.64■■■□□ 2.5
LIMD2-202ENST00000578061 METP08581 1390 aa30.64■■■□□ 2.5
LIMD2-202ENST00000578061 VGFO15240 615 aaPredicted RBP30.63■■■□□ 2.49
LIMD2-202ENST00000578061 RPGRIP1LQ68CZ1 1315 aa30.63■■■□□ 2.49
LIMD2-202ENST00000578061 C14orf37Q86TY3 774 aa30.62■■■□□ 2.49
LIMD2-202ENST00000578061 MSH6P52701 1360 aa30.62■■■□□ 2.49
LIMD2-202ENST00000578061 SPATA31E1Q6ZUB1 1445 aa30.57■■■□□ 2.48
LIMD2-202ENST00000578061 DISP3Q9P2K9 1392 aa30.56■■■□□ 2.48
LIMD2-202ENST00000578061 PPLO60437 1756 aa30.56■■■□□ 2.48
LIMD2-202ENST00000578061 XRN1Q8IZH2 1706 aaKnown RBP30.53■■■□□ 2.48
LIMD2-202ENST00000578061 ADGRF5Q8IZF2 1346 aa30.52■■■□□ 2.48
LIMD2-202ENST00000578061 NCOA3Q9Y6Q9 1424 aa30.52■■■□□ 2.48
LIMD2-202ENST00000578061 FAM135BQ49AJ0 1406 aa30.51■■■□□ 2.47
LIMD2-202ENST00000578061 SLAIN2Q9P270 581 aa30.51■■■□□ 2.47
LIMD2-202ENST00000578061 HRCP23327 699 aa30.49■■■□□ 2.47
LIMD2-202ENST00000578061 C19orf44Q9H6X5 657 aa30.48■■■□□ 2.47
LIMD2-202ENST00000578061 ROBO1Q9Y6N7 1651 aa30.46■■■□□ 2.47
LIMD2-202ENST00000578061 ATF3P18847 181 aa30.46■■■□□ 2.47
LIMD2-202ENST00000578061 SETD1AO15047 1707 aaKnown RBP30.46■■■□□ 2.47
LIMD2-202ENST00000578061 SIPA1L2Q9P2F8 1722 aaPredicted RBP30.45■■■□□ 2.47
LIMD2-202ENST00000578061 ANKRD30BQ9BXX2 1392 aa30.45■■■□□ 2.47
LIMD2-202ENST00000578061 CADPS2Q86UW7 1296 aa30.43■■■□□ 2.46
LIMD2-202ENST00000578061 IFT172Q9UG01 1749 aa30.42■■■□□ 2.46
LIMD2-202ENST00000578061 ROBO2Q9HCK4 1378 aa30.39■■■□□ 2.45
LIMD2-202ENST00000578061 STK26Q9P289 416 aa30.35■■■□□ 2.45
LIMD2-202ENST00000578061 PIK3C2GO75747 1445 aa30.35■■■□□ 2.45
LIMD2-202ENST00000578061 PTCH1Q13635 1447 aa30.35■■■□□ 2.45
LIMD2-202ENST00000578061 MED1Q15648 1581 aaPredicted RBP30.35■■■□□ 2.45
LIMD2-202ENST00000578061 ADGRL3Q9HAR2 1447 aa30.34■■■□□ 2.45
LIMD2-202ENST00000578061 TMEM132EQ6IEE7 984 aa30.34■■■□□ 2.45
LIMD2-202ENST00000578061 DCCP43146 1447 aa30.32■■■□□ 2.44
LIMD2-202ENST00000578061 ILDR2Q71H61 639 aa30.32■■■□□ 2.44
LIMD2-202ENST00000578061 NALCNQ8IZF0 1738 aa30.3■■■□□ 2.44
LIMD2-202ENST00000578061 ASXL1Q8IXJ9 1541 aa30.28■■■□□ 2.44
LIMD2-202ENST00000578061 MYOM2P54296 1465 aa30.28■■■□□ 2.44
LIMD2-202ENST00000578061 MST1RQ04912 1400 aa30.28■■■□□ 2.44
LIMD2-202ENST00000578061 PRAG1Q86YV5 1406 aa30.28■■■□□ 2.44
LIMD2-202ENST00000578061 PHLPP1O60346 1717 aa30.27■■■□□ 2.44
LIMD2-202ENST00000578061 CFAP70Q5T0N1 1121 aa30.27■■■□□ 2.44
LIMD2-202ENST00000578061 BRINP3Q76B58 766 aa30.27■■■□□ 2.44
LIMD2-202ENST00000578061 KDM2AQ9Y2K7 1162 aa30.27■■■□□ 2.44
LIMD2-202ENST00000578061 NRXN1Q9ULB1 1477 aa30.26■■■□□ 2.44
LIMD2-202ENST00000578061 C14orf93Q9H972 538 aaKnown RBP30.26■■■□□ 2.43
LIMD2-202ENST00000578061 LRPPRCP42704 1394 aaKnown RBP30.26■■■□□ 2.43
LIMD2-202ENST00000578061 WAPLQ7Z5K2 1190 aa30.24■■■□□ 2.43
LIMD2-202ENST00000578061 DCAF11Q8TEB1 546 aa30.24■■■□□ 2.43
LIMD2-202ENST00000578061 PHF23Q9BUL5 403 aaPredicted RBP30.21■■■□□ 2.43
LIMD2-202ENST00000578061 YTHDC2Q9H6S0 1430 aaKnown RBP30.21■■■□□ 2.43
LIMD2-202ENST00000578061 COL16A1Q07092 1604 aaPredicted RBP30.19■■■□□ 2.42
LIMD2-202ENST00000578061 ABCC11Q96J66 1382 aa30.19■■■□□ 2.42
LIMD2-202ENST00000578061 PLEKHH1Q9ULM0 1364 aa30.19■■■□□ 2.42
LIMD2-202ENST00000578061 TECPR2O15040 1411 aa30.19■■■□□ 2.42
LIMD2-202ENST00000578061 AHDC1Q5TGY3 1603 aaPredicted RBP30.18■■■□□ 2.42
LIMD2-202ENST00000578061 DHX57Q6P158 1386 aaKnown RBP30.17■■■□□ 2.42
LIMD2-202ENST00000578061 DDX17Q92841 729 aaKnown RBP30.16■■■□□ 2.42
LIMD2-202ENST00000578061 C1orf167Q5SNV9 1468 aa30.16■■■□□ 2.42
LIMD2-202ENST00000578061 JCADQ9P266 1359 aa30.15■■■□□ 2.42
LIMD2-202ENST00000578061 LAMC1P11047 1609 aa30.14■■■□□ 2.41
LIMD2-202ENST00000578061 KNDC1Q76NI1 1749 aa30.13■■■□□ 2.41
LIMD2-202ENST00000578061 ORAI2Q96SN7 254 aa30.12■■■□□ 2.41
Retrieved 100 of 20,778 RNA–protein pairs in 89.6 ms