RNA–Protein interactions for RNA: ENST00000577990.1

SMARCD2-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 3

Gene SMARCD2, Length 449 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-206ENST00000577990 CHGAP10645 457 aaKnown RBP33.01■■■□□ 2.87
SMARCD2-206ENST00000577990 MPHOSPH9Q99550 1183 aa32.99■■■□□ 2.87
SMARCD2-206ENST00000577990 CLTCL1P53675 1640 aa32.98■■■□□ 2.87
SMARCD2-206ENST00000577990 ZFYVE9O95405 1425 aa32.95■■■□□ 2.87
SMARCD2-206ENST00000577990 LRRC7Q96NW7 1537 aa32.95■■■□□ 2.87
SMARCD2-206ENST00000577990 RIMS2Q9UQ26 1411 aa32.94■■■□□ 2.86
SMARCD2-206ENST00000577990 SCAF1Q9H7N4 1312 aaKnown RBP32.94■■■□□ 2.86
SMARCD2-206ENST00000577990 PIP4K2BP78356 416 aa32.91■■■□□ 2.86
SMARCD2-206ENST00000577990 FOXD1Q16676 465 aa32.91■■■□□ 2.86
SMARCD2-206ENST00000577990 HRCP23327 699 aa32.9■■■□□ 2.86
SMARCD2-206ENST00000577990 ALKQ9UM73 1620 aa32.9■■■□□ 2.86
SMARCD2-206ENST00000577990 HDGFP51858 240 aaKnown RBP32.89■■■□□ 2.86
SMARCD2-206ENST00000577990 XIRP1Q702N8 1843 aaKnown RBP32.88■■■□□ 2.85
SMARCD2-206ENST00000577990 KIF1BO60333 1816 aa32.88■■■□□ 2.85
SMARCD2-206ENST00000577990 TOM1O60784 492 aa32.87■■■□□ 2.85
SMARCD2-206ENST00000577990 ABCF1Q8NE71 845 aaKnown RBP eCLIP32.86■■■□□ 2.85
SMARCD2-206ENST00000577990 PPP1R15AO75807 674 aaPredicted RBP32.85■■■□□ 2.85
SMARCD2-206ENST00000577990 DISP3Q9P2K9 1392 aa32.84■■■□□ 2.85
SMARCD2-206ENST00000577990 SENP3Q9H4L4 574 aaPredicted RBP32.84■■■□□ 2.85
SMARCD2-206ENST00000577990 PLEKHG1Q9ULL1 1385 aa32.83■■■□□ 2.85
SMARCD2-206ENST00000577990 SLC26A8Q96RN1 970 aa32.82■■■□□ 2.84
SMARCD2-206ENST00000577990 ZNF326Q5BKZ1 582 aaKnown RBP32.81■■■□□ 2.84
SMARCD2-206ENST00000577990 CCDC144AA2RUR9 1427 aa32.79■■■□□ 2.84
SMARCD2-206ENST00000577990 NUTM2DQ5VT03 806 aaPredicted RBP32.79■■■□□ 2.84
SMARCD2-206ENST00000577990 BCANQ96GW7 911 aa32.78■■■□□ 2.84
SMARCD2-206ENST00000577990 HSPA1LP34931 641 aa32.77■■■□□ 2.84
SMARCD2-206ENST00000577990 NEXMIFQ5QGS0 1516 aa32.74■■■□□ 2.83
SMARCD2-206ENST00000577990 NWD1Q149M9 1564 aa32.7■■■□□ 2.83
SMARCD2-206ENST00000577990 KCNA6P17658 529 aa32.69■■■□□ 2.82
SMARCD2-206ENST00000577990 ADAMTS13Q76LX8 1427 aa32.68■■■□□ 2.82
SMARCD2-206ENST00000577990 CHD2O14647 1828 aaKnown RBP32.67■■■□□ 2.82
SMARCD2-206ENST00000577990 DIP2AQ14689 1571 aa32.67■■■□□ 2.82
SMARCD2-206ENST00000577990 TMEM94Q12767 1356 aa32.67■■■□□ 2.82
SMARCD2-206ENST00000577990 TRIM26Q12899 539 aaPredicted RBP32.66■■■□□ 2.82
SMARCD2-206ENST00000577990 RBM33Q96EV2 1170 aaKnown RBP32.66■■■□□ 2.82
SMARCD2-206ENST00000577990 RPGRIP1LQ68CZ1 1315 aa32.66■■■□□ 2.82
SMARCD2-206ENST00000577990 SPATA31E1Q6ZUB1 1445 aa32.66■■■□□ 2.82
SMARCD2-206ENST00000577990 TBX22Q9Y458 520 aa32.65■■■□□ 2.82
SMARCD2-206ENST00000577990 ILDR2Q71H61 639 aa32.64■■■□□ 2.82
SMARCD2-206ENST00000577990 SETBP1Q9Y6X0 1596 aa32.64■■■□□ 2.82
SMARCD2-206ENST00000577990 NKTRP30414 1462 aaKnown RBP32.63■■■□□ 2.81
SMARCD2-206ENST00000577990 ANKRD30BQ9BXX2 1392 aa32.63■■■□□ 2.81
SMARCD2-206ENST00000577990 PPLO60437 1756 aa32.63■■■□□ 2.81
SMARCD2-206ENST00000577990 NRXN3Q9Y4C0 1643 aa32.62■■■□□ 2.81
SMARCD2-206ENST00000577990 PROSER2Q86WR7 435 aaPredicted RBP32.62■■■□□ 2.81
SMARCD2-206ENST00000577990 VGFO15240 615 aaPredicted RBP32.59■■■□□ 2.81
SMARCD2-206ENST00000577990 RGL3Q3MIN7 710 aa32.58■■■□□ 2.81
SMARCD2-206ENST00000577990 PIK3R4Q99570 1358 aa32.57■■■□□ 2.8
SMARCD2-206ENST00000577990 MED1Q15648 1581 aaPredicted RBP32.56■■■□□ 2.8
SMARCD2-206ENST00000577990 IFT172Q9UG01 1749 aa32.54■■■□□ 2.8
SMARCD2-206ENST00000577990 ROBO1Q9Y6N7 1651 aa32.49■■■□□ 2.79
SMARCD2-206ENST00000577990 PTPRUQ92729 1446 aa32.46■■■□□ 2.79
SMARCD2-206ENST00000577990 METP08581 1390 aa32.45■■■□□ 2.79
SMARCD2-206ENST00000577990 MSH6P52701 1360 aa32.45■■■□□ 2.79
SMARCD2-206ENST00000577990 ADGRF5Q8IZF2 1346 aa32.45■■■□□ 2.78
SMARCD2-206ENST00000577990 SETD1AO15047 1707 aaKnown RBP32.44■■■□□ 2.78
SMARCD2-206ENST00000577990 FAM135BQ49AJ0 1406 aa32.43■■■□□ 2.78
SMARCD2-206ENST00000577990 AMOTL2Q9Y2J4 779 aa32.42■■■□□ 2.78
SMARCD2-206ENST00000577990 XRN1Q8IZH2 1706 aaKnown RBP32.42■■■□□ 2.78
SMARCD2-206ENST00000577990 MYOM2P54296 1465 aa32.39■■■□□ 2.78
SMARCD2-206ENST00000577990 PIK3C2GO75747 1445 aa32.37■■■□□ 2.77
SMARCD2-206ENST00000577990 SIPA1L2Q9P2F8 1722 aaPredicted RBP32.37■■■□□ 2.77
SMARCD2-206ENST00000577990 C14orf37Q86TY3 774 aa32.36■■■□□ 2.77
SMARCD2-206ENST00000577990 NRXN1Q9ULB1 1477 aa32.35■■■□□ 2.77
SMARCD2-206ENST00000577990 NCOA3Q9Y6Q9 1424 aa32.34■■■□□ 2.77
SMARCD2-206ENST00000577990 DHX57Q6P158 1386 aaKnown RBP32.32■■■□□ 2.77
SMARCD2-206ENST00000577990 SLAIN2Q9P270 581 aa32.31■■■□□ 2.76
SMARCD2-206ENST00000577990 PHLPP1O60346 1717 aa32.3■■■□□ 2.76
SMARCD2-206ENST00000577990 SOCS7O14512 581 aa32.29■■■□□ 2.76
SMARCD2-206ENST00000577990 PHF23Q9BUL5 403 aaPredicted RBP32.27■■■□□ 2.76
SMARCD2-206ENST00000577990 PRAG1Q86YV5 1406 aa32.26■■■□□ 2.76
SMARCD2-206ENST00000577990 DCAF11Q8TEB1 546 aa32.26■■■□□ 2.75
SMARCD2-206ENST00000577990 LAMC1P11047 1609 aa32.26■■■□□ 2.75
SMARCD2-206ENST00000577990 PTCH1Q13635 1447 aa32.26■■■□□ 2.75
SMARCD2-206ENST00000577990 ASXL1Q8IXJ9 1541 aa32.25■■■□□ 2.75
SMARCD2-206ENST00000577990 STAC3Q96MF2 364 aa32.24■■■□□ 2.75
SMARCD2-206ENST00000577990 C14orf93Q9H972 538 aaKnown RBP32.24■■■□□ 2.75
SMARCD2-206ENST00000577990 C19orf44Q9H6X5 657 aa32.23■■■□□ 2.75
SMARCD2-206ENST00000577990 KDM2AQ9Y2K7 1162 aa32.23■■■□□ 2.75
SMARCD2-206ENST00000577990 ROBO2Q9HCK4 1378 aa32.2■■■□□ 2.75
SMARCD2-206ENST00000577990 ATF3P18847 181 aa32.2■■■□□ 2.75
SMARCD2-206ENST00000577990 CFAP70Q5T0N1 1121 aa32.2■■■□□ 2.75
SMARCD2-206ENST00000577990 CADPS2Q86UW7 1296 aa32.19■■■□□ 2.74
SMARCD2-206ENST00000577990 LRPPRCP42704 1394 aaKnown RBP32.19■■■□□ 2.74
SMARCD2-206ENST00000577990 NALCNQ8IZF0 1738 aa32.18■■■□□ 2.74
SMARCD2-206ENST00000577990 TMEM132EQ6IEE7 984 aa32.18■■■□□ 2.74
SMARCD2-206ENST00000577990 COL16A1Q07092 1604 aaPredicted RBP32.18■■■□□ 2.74
SMARCD2-206ENST00000577990 SIN3AQ96ST3 1273 aa32.17■■■□□ 2.74
SMARCD2-206ENST00000577990 KNDC1Q76NI1 1749 aa32.16■■■□□ 2.74
SMARCD2-206ENST00000577990 TECPR2O15040 1411 aa32.16■■■□□ 2.74
SMARCD2-206ENST00000577990 YTHDC2Q9H6S0 1430 aaKnown RBP32.15■■■□□ 2.74
SMARCD2-206ENST00000577990 ADGRL3Q9HAR2 1447 aa32.15■■■□□ 2.74
SMARCD2-206ENST00000577990 PCGF6Q9BYE7 350 aa32.14■■■□□ 2.74
SMARCD2-206ENST00000577990 STK26Q9P289 416 aa32.14■■■□□ 2.74
SMARCD2-206ENST00000577990 DCCP43146 1447 aa32.14■■■□□ 2.74
SMARCD2-206ENST00000577990 ABCC11Q96J66 1382 aa32.13■■■□□ 2.73
SMARCD2-206ENST00000577990 AHDC1Q5TGY3 1603 aaPredicted RBP32.11■■■□□ 2.73
SMARCD2-206ENST00000577990 NEUROD1Q13562 356 aa32.1■■■□□ 2.73
SMARCD2-206ENST00000577990 ADGRB1O14514 1584 aa32.09■■■□□ 2.73
SMARCD2-206ENST00000577990 MST1RQ04912 1400 aa32.07■■■□□ 2.72
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms