RNA–Protein interactions for RNA: ENST00000577539.1

VAPA-203, Transcript of VAMP associated protein A, humanhuman

Gene VAPA, Length 3,760 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-203ENST00000577539 HNRNPUQ00839 825 aaKnown RBP eCLIP7.41□□□□□ -1.22
VAPA-203ENST00000577539 ZNF326Q5BKZ1 582 aaKnown RBP7.41□□□□□ -1.22
VAPA-203ENST00000577539 CLUAP1Q96AJ1 413 aa7.41□□□□□ -1.22
VAPA-203ENST00000577539 GRIN2BQ13224 1484 aa7.41□□□□□ -1.22
VAPA-203ENST00000577539 CCER2I3L3R5 266 aa7.41□□□□□ -1.22
VAPA-203ENST00000577539 EIF4G2P78344 907 aaKnown RBP eCLIP7.41□□□□□ -1.22
VAPA-203ENST00000577539 ZNF644Q9H582 1327 aaPredicted RBP7.4□□□□□ -1.22
VAPA-203ENST00000577539 MCM6Q14566 821 aa7.4□□□□□ -1.22
VAPA-203ENST00000577539 CHMP7Q8WUX9 453 aaPredicted RBP7.4□□□□□ -1.22
VAPA-203ENST00000577539 L3MBTL2Q969R5 705 aa7.4□□□□□ -1.23
VAPA-203ENST00000577539 EVX2Q03828 476 aa7.39□□□□□ -1.23
VAPA-203ENST00000577539 CDK13Q14004 1512 aaKnown RBP7.39□□□□□ -1.23
VAPA-203ENST00000577539 EHBP1L1Q8N3D4 1523 aa7.39□□□□□ -1.23
VAPA-203ENST00000577539 ABCA5Q8WWZ7 1642 aa7.39□□□□□ -1.23
VAPA-203ENST00000577539 GALR2O43603 387 aaPredicted RBP7.39□□□□□ -1.23
VAPA-203ENST00000577539 A6NJR5 290 aa7.39□□□□□ -1.23
VAPA-203ENST00000577539 PLPP6Q8IY26 295 aa7.39□□□□□ -1.23
VAPA-203ENST00000577539 PTPN23Q9H3S7 1636 aa7.39□□□□□ -1.23
VAPA-203ENST00000577539 GNPATO15228 680 aa7.38□□□□□ -1.23
VAPA-203ENST00000577539 SUPT6HQ7KZ85 1726 aaKnown RBP7.38□□□□□ -1.23
VAPA-203ENST00000577539 POTEFA5A3E0 1075 aa7.38□□□□□ -1.23
VAPA-203ENST00000577539 CFDP1Q9UEE9 299 aaPredicted RBP7.38□□□□□ -1.23
VAPA-203ENST00000577539 EPRSP07814 1512 aaKnown RBP7.38□□□□□ -1.23
VAPA-203ENST00000577539 SAMD9Q5K651 1589 aa7.37□□□□□ -1.23
VAPA-203ENST00000577539 KIF21AQ7Z4S6 1674 aa7.37□□□□□ -1.23
VAPA-203ENST00000577539 IRX6P78412 446 aaPredicted RBP7.37□□□□□ -1.23
VAPA-203ENST00000577539 POM121Q96HA1 1249 aa7.37□□□□□ -1.23
VAPA-203ENST00000577539 TRIM35Q9UPQ4 493 aa7.37□□□□□ -1.23
VAPA-203ENST00000577539 MAGI3Q5TCQ9 1506 aa7.37□□□□□ -1.23
VAPA-203ENST00000577539 TRAK2O60296 914 aa7.37□□□□□ -1.23
VAPA-203ENST00000577539 FAM9BQ8IZU0 186 aa7.37□□□□□ -1.23
VAPA-203ENST00000577539 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP7.36□□□□□ -1.236e-18■□□□□ 10.3
VAPA-203ENST00000577539 ZNF608Q9ULD9 1512 aaPredicted RBP7.36□□□□□ -1.23
VAPA-203ENST00000577539 IQGAP2Q13576 1575 aa7.36□□□□□ -1.23
VAPA-203ENST00000577539 GIGYF2Q6Y7W6 1299 aaKnown RBP7.36□□□□□ -1.23
VAPA-203ENST00000577539 CDHR5Q9HBB8 845 aa7.36□□□□□ -1.23
VAPA-203ENST00000577539 ANO8Q9HCE9 1232 aaPredicted RBP7.36□□□□□ -1.23
VAPA-203ENST00000577539 UGGT2Q9NYU1 1516 aa7.36□□□□□ -1.23
VAPA-203ENST00000577539 MRC2Q9UBG0 1479 aa7.36□□□□□ -1.23
VAPA-203ENST00000577539 MYT1Q01538 1121 aa7.36□□□□□ -1.23
VAPA-203ENST00000577539 DDRGK1Q96HY6 314 aa7.36□□□□□ -1.23
VAPA-203ENST00000577539 WASHC2AQ641Q2 1341 aa7.35□□□□□ -1.23
VAPA-203ENST00000577539 ATN1P54259 1190 aaPredicted RBP7.35□□□□□ -1.23
VAPA-203ENST00000577539 KRI1Q8N9T8 703 aaKnown RBP7.35□□□□□ -1.23
VAPA-203ENST00000577539 GNL3Q9BVP2 549 aaKnown RBP eCLIP7.35□□□□□ -1.23
VAPA-203ENST00000577539 HECW1Q76N89 1606 aa7.35□□□□□ -1.23
VAPA-203ENST00000577539 ASTLQ6HA08 431 aaPredicted RBP7.34□□□□□ -1.23
VAPA-203ENST00000577539 CCDC82Q8N4S0 544 aa7.34□□□□□ -1.23
VAPA-203ENST00000577539 ERCC6Q03468 1493 aa7.34□□□□□ -1.23
VAPA-203ENST00000577539 HIC1Q14526 733 aa7.34□□□□□ -1.23
VAPA-203ENST00000577539 MRS2Q9HD23 443 aa7.34□□□□□ -1.23
VAPA-203ENST00000577539 TARBP1Q13395 1621 aaKnown RBP7.34□□□□□ -1.23
VAPA-203ENST00000577539 THOC2Q8NI27 1593 aaKnown RBP7.34□□□□□ -1.24
VAPA-203ENST00000577539 MIA2Q96PC5 1412 aa7.33□□□□□ -1.24
VAPA-203ENST00000577539 APBB1O00213 710 aa7.33□□□□□ -1.24
VAPA-203ENST00000577539 PLEKHD1A6NEE1 506 aa7.33□□□□□ -1.24
VAPA-203ENST00000577539 NBPF8Q3BBV2 869 aa7.33□□□□□ -1.24
VAPA-203ENST00000577539 PRG4Q92954 1404 aaPredicted RBP7.32□□□□□ -1.24
VAPA-203ENST00000577539 C11orf95C9JLR9 678 aaPredicted RBP7.32□□□□□ -1.24
VAPA-203ENST00000577539 JPH4Q96JJ6 628 aa7.32□□□□□ -1.24
VAPA-203ENST00000577539 LRRIQ1Q96JM4 1722 aa7.32□□□□□ -1.24
VAPA-203ENST00000577539 SENP3-EIF4A1A0A087X0R7 540 aa7.32□□□□□ -1.24
VAPA-203ENST00000577539 IFT140Q96RY7 1462 aa7.31□□□□□ -1.24
VAPA-203ENST00000577539 GRXCR2A6NFK2 248 aa7.31□□□□□ -1.24
VAPA-203ENST00000577539 CCDC184Q52MB2 194 aa7.31□□□□□ -1.24
VAPA-203ENST00000577539 ADAMTS12P58397 1594 aa7.31□□□□□ -1.24
VAPA-203ENST00000577539 KIAA0586Q9BVV6 1533 aa7.31□□□□□ -1.24
VAPA-203ENST00000577539 DAPK1P53355 1430 aa7.31□□□□□ -1.24
VAPA-203ENST00000577539 TCOF1Q13428 1488 aaKnown RBP7.31□□□□□ -1.24
VAPA-203ENST00000577539 ATMINO43313 823 aaPredicted RBP7.31□□□□□ -1.24
VAPA-203ENST00000577539 SH3D19Q5HYK7 790 aa7.31□□□□□ -1.24
VAPA-203ENST00000577539 ABCC5O15440 1437 aa7.3□□□□□ -1.24
VAPA-203ENST00000577539 DDX12PQ92771 950 aa7.3□□□□□ -1.24
VAPA-203ENST00000577539 GPR37L1O60883 481 aa7.3□□□□□ -1.24
VAPA-203ENST00000577539 IGSF3O75054 1194 aa7.3□□□□□ -1.24
VAPA-203ENST00000577539 TSPY4P0CV99 314 aa7.3□□□□□ -1.24
VAPA-203ENST00000577539 TSPY10P0CW01 314 aa7.3□□□□□ -1.24
VAPA-203ENST00000577539 WDR62O43379 1518 aa7.3□□□□□ -1.24
VAPA-203ENST00000577539 KDM6BO15054 1643 aa7.3□□□□□ -1.24
VAPA-203ENST00000577539 PAK3O75914 559 aaPredicted RBP7.3□□□□□ -1.24
VAPA-203ENST00000577539 ARHGEF11O15085 1522 aa7.29□□□□□ -1.24
VAPA-203ENST00000577539 PBRM1Q86U86 1689 aa7.29□□□□□ -1.24
VAPA-203ENST00000577539 PRKRIP1Q9H875 184 aaPredicted RBP7.29□□□□□ -1.24
VAPA-203ENST00000577539 EIF5BO60841 1220 aaKnown RBP7.29□□□□□ -1.24
VAPA-203ENST00000577539 PTCD2Q8WV60 388 aaKnown RBP7.29□□□□□ -1.24
VAPA-203ENST00000577539 CCDC7Q96M83 1385 aa7.29□□□□□ -1.24
VAPA-203ENST00000577539 ANKRD30BQ9BXX2 1392 aa7.29□□□□□ -1.24
VAPA-203ENST00000577539 NUP153P49790 1475 aaKnown RBP7.29□□□□□ -1.24
VAPA-203ENST00000577539 FLIIQ13045 1269 aa7.29□□□□□ -1.24
VAPA-203ENST00000577539 TTC13Q8NBP0 860 aa7.29□□□□□ -1.24
VAPA-203ENST00000577539 BOLA1Q9Y3E2 137 aa7.29□□□□□ -1.24
VAPA-203ENST00000577539 GRIN2AQ12879 1464 aa7.28□□□□□ -1.24
VAPA-203ENST00000577539 PLB1Q6P1J6 1458 aa7.28□□□□□ -1.24
VAPA-203ENST00000577539 PROCA1Q8NCQ7 364 aaPredicted RBP7.28□□□□□ -1.24
VAPA-203ENST00000577539 CARMIL2Q6F5E8 1435 aa7.28□□□□□ -1.24
VAPA-203ENST00000577539 AKNAQ7Z591 1439 aa7.28□□□□□ -1.24
VAPA-203ENST00000577539 KIF7Q2M1P5 1343 aa7.28□□□□□ -1.24
VAPA-203ENST00000577539 DENND4BO75064 1496 aaPredicted RBP7.28□□□□□ -1.24
VAPA-203ENST00000577539 FCHSD2O94868 740 aa7.28□□□□□ -1.24
VAPA-203ENST00000577539 DISP1Q96F81 1524 aa7.27□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms