RNA–Protein interactions for RNA: ENST00000577497.5

CUEDC1-204, Transcript of CUE domain containing 1, humanhuman

TSL 2

Gene CUEDC1, Length 707 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1-204ENST00000577497 XIRP1Q702N8 1843 aaKnown RBP20.66■□□□□ 0.9
CUEDC1-204ENST00000577497 RIMS2Q9UQ26 1411 aa20.65■□□□□ 0.9
CUEDC1-204ENST00000577497 CHGAP10645 457 aaKnown RBP20.63■□□□□ 0.89
CUEDC1-204ENST00000577497 HSPA1LP34931 641 aa20.62■□□□□ 0.89
CUEDC1-204ENST00000577497 SPHKAPQ2M3C7 1700 aa20.61■□□□□ 0.89
CUEDC1-204ENST00000577497 DISP3Q9P2K9 1392 aa20.61■□□□□ 0.89
CUEDC1-204ENST00000577497 PLEKHG1Q9ULL1 1385 aa20.61■□□□□ 0.89
CUEDC1-204ENST00000577497 NWD1Q149M9 1564 aa20.6■□□□□ 0.89
CUEDC1-204ENST00000577497 NUTM2DQ5VT03 806 aaPredicted RBP20.6■□□□□ 0.89
CUEDC1-204ENST00000577497 HFM1A2PYH4 1435 aa20.6■□□□□ 0.89
CUEDC1-204ENST00000577497 BCANQ96GW7 911 aa20.59■□□□□ 0.89
CUEDC1-204ENST00000577497 PPP1R15AO75807 674 aaPredicted RBP20.58■□□□□ 0.89
CUEDC1-204ENST00000577497 KCNA6P17658 529 aa20.58■□□□□ 0.89
CUEDC1-204ENST00000577497 RBM33Q96EV2 1170 aaKnown RBP20.58■□□□□ 0.89
CUEDC1-204ENST00000577497 TMEM94Q12767 1356 aa20.58■□□□□ 0.88
CUEDC1-204ENST00000577497 ADAMTS13Q76LX8 1427 aa20.55■□□□□ 0.88
CUEDC1-204ENST00000577497 CLTCL1P53675 1640 aa20.55■□□□□ 0.88
CUEDC1-204ENST00000577497 NKTRP30414 1462 aaKnown RBP20.55■□□□□ 0.88
CUEDC1-204ENST00000577497 TRPM2O94759 1503 aa20.53■□□□□ 0.88
CUEDC1-204ENST00000577497 HDGFP51858 240 aaKnown RBP20.52■□□□□ 0.88
CUEDC1-204ENST00000577497 ILDR2Q71H61 639 aa20.52■□□□□ 0.88
CUEDC1-204ENST00000577497 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.52■□□□□ 0.88
CUEDC1-204ENST00000577497 CHD2O14647 1828 aaKnown RBP20.52■□□□□ 0.88
CUEDC1-204ENST00000577497 PROSER2Q86WR7 435 aaPredicted RBP20.51■□□□□ 0.87
CUEDC1-204ENST00000577497 TRIM52Q96A61 297 aa20.5■□□□□ 0.87
CUEDC1-204ENST00000577497 NRXN3Q9Y4C0 1643 aa20.49■□□□□ 0.87
CUEDC1-204ENST00000577497 TBX22Q9Y458 520 aa20.49■□□□□ 0.87
CUEDC1-204ENST00000577497 DIP2AQ14689 1571 aa20.49■□□□□ 0.87
CUEDC1-204ENST00000577497 MED1Q15648 1581 aaPredicted RBP20.46■□□□□ 0.87
CUEDC1-204ENST00000577497 NEXMIFQ5QGS0 1516 aa20.46■□□□□ 0.87
CUEDC1-204ENST00000577497 ZNF326Q5BKZ1 582 aaKnown RBP20.45■□□□□ 0.86
CUEDC1-204ENST00000577497 PTPRUQ92729 1446 aa20.44■□□□□ 0.86
CUEDC1-204ENST00000577497 SETBP1Q9Y6X0 1596 aa20.44■□□□□ 0.86
CUEDC1-204ENST00000577497 SLC4A1APQ9BWU0 796 aaKnown RBP20.44■□□□□ 0.86
CUEDC1-204ENST00000577497 ROBO1Q9Y6N7 1651 aa20.42■□□□□ 0.86
CUEDC1-204ENST00000577497 KIF1BO60333 1816 aa20.42■□□□□ 0.86
CUEDC1-204ENST00000577497 FOXD1Q16676 465 aa20.42■□□□□ 0.86
CUEDC1-204ENST00000577497 MSH6P52701 1360 aa20.42■□□□□ 0.86
CUEDC1-204ENST00000577497 FAM135BQ49AJ0 1406 aa20.42■□□□□ 0.86
CUEDC1-204ENST00000577497 PIK3R4Q99570 1358 aa20.41■□□□□ 0.86
CUEDC1-204ENST00000577497 XRN1Q8IZH2 1706 aaKnown RBP20.39■□□□□ 0.85
CUEDC1-204ENST00000577497 METP08581 1390 aa20.38■□□□□ 0.85
CUEDC1-204ENST00000577497 AMOTL2Q9Y2J4 779 aa20.38■□□□□ 0.85
CUEDC1-204ENST00000577497 NCOA3Q9Y6Q9 1424 aa20.36■□□□□ 0.85
CUEDC1-204ENST00000577497 SIPA1L2Q9P2F8 1722 aaPredicted RBP20.35■□□□□ 0.85
CUEDC1-204ENST00000577497 SLAIN2Q9P270 581 aa20.34■□□□□ 0.85
CUEDC1-204ENST00000577497 C14orf37Q86TY3 774 aa20.33■□□□□ 0.85
CUEDC1-204ENST00000577497 SETD1AO15047 1707 aaKnown RBP20.33■□□□□ 0.84
CUEDC1-204ENST00000577497 MPHOSPH9Q99550 1183 aa20.32■□□□□ 0.84
CUEDC1-204ENST00000577497 PPLO60437 1756 aa20.31■□□□□ 0.84
CUEDC1-204ENST00000577497 SETD5Q9C0A6 1442 aa20.29■□□□□ 0.84
CUEDC1-204ENST00000577497 C19orf44Q9H6X5 657 aa20.29■□□□□ 0.84
CUEDC1-204ENST00000577497 CCDC144AA2RUR9 1427 aa20.28■□□□□ 0.84
CUEDC1-204ENST00000577497 PHLPP1O60346 1717 aa20.28■□□□□ 0.84
CUEDC1-204ENST00000577497 SOCS7O14512 581 aa20.27■□□□□ 0.84
CUEDC1-204ENST00000577497 SPATA31E1Q6ZUB1 1445 aa20.27■□□□□ 0.83
CUEDC1-204ENST00000577497 RPGRIP1LQ68CZ1 1315 aa20.27■□□□□ 0.83
CUEDC1-204ENST00000577497 VGFO15240 615 aaPredicted RBP20.26■□□□□ 0.83
CUEDC1-204ENST00000577497 CADPS2Q86UW7 1296 aa20.26■□□□□ 0.83
CUEDC1-204ENST00000577497 NALCNQ8IZF0 1738 aa20.25■□□□□ 0.83
CUEDC1-204ENST00000577497 RAB3GAP2Q9H2M9 1393 aa20.25■□□□□ 0.83
CUEDC1-204ENST00000577497 COL16A1Q07092 1604 aaPredicted RBP20.25■□□□□ 0.83
CUEDC1-204ENST00000577497 ATF3P18847 181 aa20.25■□□□□ 0.83
CUEDC1-204ENST00000577497 PHF23Q9BUL5 403 aaPredicted RBP20.24■□□□□ 0.83
CUEDC1-204ENST00000577497 DCCP43146 1447 aa20.23■□□□□ 0.83
CUEDC1-204ENST00000577497 IFT172Q9UG01 1749 aa20.23■□□□□ 0.83
CUEDC1-204ENST00000577497 ADGRL3Q9HAR2 1447 aa20.22■□□□□ 0.83
CUEDC1-204ENST00000577497 RGL3Q3MIN7 710 aa20.22■□□□□ 0.83
CUEDC1-204ENST00000577497 ADGRF5Q8IZF2 1346 aa20.22■□□□□ 0.83
CUEDC1-204ENST00000577497 ROBO2Q9HCK4 1378 aa20.21■□□□□ 0.83
CUEDC1-204ENST00000577497 MST1RQ04912 1400 aa20.21■□□□□ 0.83
CUEDC1-204ENST00000577497 PTCH1Q13635 1447 aa20.21■□□□□ 0.83
CUEDC1-204ENST00000577497 AHDC1Q5TGY3 1603 aaPredicted RBP20.2■□□□□ 0.82
CUEDC1-204ENST00000577497 BRINP3Q76B58 766 aa20.2■□□□□ 0.82
CUEDC1-204ENST00000577497 RGS17Q9UGC6 210 aaPredicted RBP20.2■□□□□ 0.82
CUEDC1-204ENST00000577497 PRAG1Q86YV5 1406 aa20.19■□□□□ 0.82
CUEDC1-204ENST00000577497 ASXL1Q8IXJ9 1541 aa20.18■□□□□ 0.82
CUEDC1-204ENST00000577497 JCADQ9P266 1359 aa20.17■□□□□ 0.82
CUEDC1-204ENST00000577497 ANKRD30BQ9BXX2 1392 aa20.15■□□□□ 0.82
CUEDC1-204ENST00000577497 PIK3C2GO75747 1445 aa20.14■□□□□ 0.81
CUEDC1-204ENST00000577497 LRP6O75581 1613 aa20.13■□□□□ 0.81
CUEDC1-204ENST00000577497 ACIN1Q9UKV3 1341 aaKnown RBP20.13■□□□□ 0.81
CUEDC1-204ENST00000577497 NHSL1Q5SYE7 1610 aa20.13■□□□□ 0.81
CUEDC1-204ENST00000577497 SHPRHQ149N8 1683 aa20.11■□□□□ 0.81
CUEDC1-204ENST00000577497 DDX17Q92841 729 aaKnown RBP20.11■□□□□ 0.81
CUEDC1-204ENST00000577497 C1orf167Q5SNV9 1468 aa20.11■□□□□ 0.81
CUEDC1-204ENST00000577497 TMEM132EQ6IEE7 984 aa20.09■□□□□ 0.81
CUEDC1-204ENST00000577497 NRXN1Q9ULB1 1477 aa20.09■□□□□ 0.81
CUEDC1-204ENST00000577497 TECPR2O15040 1411 aa20.09■□□□□ 0.81
CUEDC1-204ENST00000577497 STK26Q9P289 416 aa20.08■□□□□ 0.81
CUEDC1-204ENST00000577497 MYOM2P54296 1465 aa20.07■□□□□ 0.8
CUEDC1-204ENST00000577497 POTEAQ6S8J7 498 aa20.07■□□□□ 0.8
CUEDC1-204ENST00000577497 KNDC1Q76NI1 1749 aa20.07■□□□□ 0.8
CUEDC1-204ENST00000577497 LRPPRCP42704 1394 aaKnown RBP20.07■□□□□ 0.8
CUEDC1-204ENST00000577497 PLEKHH1Q9ULM0 1364 aa20.06■□□□□ 0.8
CUEDC1-204ENST00000577497 SPATA31A6Q5VVP1 1343 aa20.05■□□□□ 0.8
CUEDC1-204ENST00000577497 CDC42BPGQ6DT37 1551 aa20.05■□□□□ 0.8
CUEDC1-204ENST00000577497 WAPLQ7Z5K2 1190 aa20.05■□□□□ 0.8
CUEDC1-204ENST00000577497 ORAI2Q96SN7 254 aa20.05■□□□□ 0.8
CUEDC1-204ENST00000577497 YTHDC2Q9H6S0 1430 aaKnown RBP20.04■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms