RNA–Protein interactions for RNA: ENST00000577439.1

LINC00667-201, long intergenic non-protein coding RNA 667, humanhuman

TSL 1 (best)

Gene LINC00667, Length 3,372 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00667-201ENST00000577439 CFDP1Q9UEE9 299 aaPredicted RBP8.61□□□□□ -1.03
LINC00667-201ENST00000577439 MAGI1Q96QZ7 1491 aaPredicted RBP8.61□□□□□ -1.03
LINC00667-201ENST00000577439 ROCK2O75116 1388 aaKnown RBP8.61□□□□□ -1.03
LINC00667-201ENST00000577439 ANKRD50Q9ULJ7 1429 aa8.61□□□□□ -1.03
LINC00667-201ENST00000577439 TRAIPQ9BWF2 469 aa8.6□□□□□ -1.03
LINC00667-201ENST00000577439 NUDCQ9Y266 331 aa8.6□□□□□ -1.03
LINC00667-201ENST00000577439 ABCC10Q5T3U5 1492 aa8.59□□□□□ -1.03
LINC00667-201ENST00000577439 ABCA8O94911 1581 aa8.59□□□□□ -1.03
LINC00667-201ENST00000577439 HMGB1P09429 215 aaKnown RBP8.59□□□□□ -1.03
LINC00667-201ENST00000577439 SYNJ2O15056 1496 aa8.59□□□□□ -1.04
LINC00667-201ENST00000577439 TESPA1A2RU30 521 aaPredicted RBP8.58□□□□□ -1.04
LINC00667-201ENST00000577439 FAM117AQ9C073 453 aa8.58□□□□□ -1.04
LINC00667-201ENST00000577439 USP35Q9P2H5 1018 aa8.58□□□□□ -1.04
LINC00667-201ENST00000577439 C9orf84Q5VXU9 1444 aa8.58□□□□□ -1.04
LINC00667-201ENST00000577439 PTPRGP23470 1445 aa8.58□□□□□ -1.04
LINC00667-201ENST00000577439 ARHGEF5Q12774 1597 aa8.58□□□□□ -1.04
LINC00667-201ENST00000577439 IRF5Q13568 498 aa8.58□□□□□ -1.04
LINC00667-201ENST00000577439 LRPPRCP42704 1394 aaKnown RBP8.57□□□□□ -1.04
LINC00667-201ENST00000577439 NUP160Q12769 1436 aa8.57□□□□□ -1.04
LINC00667-201ENST00000577439 KIF15Q9NS87 1388 aa8.57□□□□□ -1.04
LINC00667-201ENST00000577439 ZNF326Q5BKZ1 582 aaKnown RBP8.56□□□□□ -1.04
LINC00667-201ENST00000577439 PNISRQ8TF01 805 aaKnown RBP8.56□□□□□ -1.04
LINC00667-201ENST00000577439 TRPM1Q7Z4N2 1603 aa8.56□□□□□ -1.04
LINC00667-201ENST00000577439 KTN1Q86UP2 1357 aaKnown RBP8.56□□□□□ -1.04
LINC00667-201ENST00000577439 BARGINQ6ZT62 677 aa8.56□□□□□ -1.04
LINC00667-201ENST00000577439 CARMIL2Q6F5E8 1435 aa8.56□□□□□ -1.04
LINC00667-201ENST00000577439 TRAK2O60296 914 aa8.56□□□□□ -1.04
LINC00667-201ENST00000577439 ZNF777Q9ULD5 760 aaPredicted RBP8.56□□□□□ -1.04
LINC00667-201ENST00000577439 RIOK3O14730 519 aaKnown RBP8.55□□□□□ -1.04
LINC00667-201ENST00000577439 RETREG2Q8NC44 543 aa8.55□□□□□ -1.04
LINC00667-201ENST00000577439 BRD4O60885 1362 aaPredicted RBP8.55□□□□□ -1.04
LINC00667-201ENST00000577439 NUP155O75694 1391 aa8.55□□□□□ -1.04
LINC00667-201ENST00000577439 ONECUT3O60422 494 aaPredicted RBP8.55□□□□□ -1.04
LINC00667-201ENST00000577439 POLR3GLQ9BT43 218 aa8.55□□□□□ -1.04
LINC00667-201ENST00000577439 KIF13AQ9H1H9 1805 aa8.54□□□□□ -1.04
LINC00667-201ENST00000577439 LAMC1P11047 1609 aa8.54□□□□□ -1.04
LINC00667-201ENST00000577439 PREX2Q70Z35 1606 aa8.54□□□□□ -1.04
LINC00667-201ENST00000577439 CARD11Q9BXL7 1154 aa8.54□□□□□ -1.04
LINC00667-201ENST00000577439 ATP10BO94823 1461 aa8.54□□□□□ -1.04
LINC00667-201ENST00000577439 BCL11BQ9C0K0 894 aaPredicted RBP8.53□□□□□ -1.04
LINC00667-201ENST00000577439 SAMD9LQ8IVG5 1584 aa8.53□□□□□ -1.04
LINC00667-201ENST00000577439 MYBBP1AQ9BQG0 1328 aaKnown RBP8.53□□□□□ -1.04
LINC00667-201ENST00000577439 FAM135AQ9P2D6 1515 aa8.53□□□□□ -1.04
LINC00667-201ENST00000577439 CDC42BPBQ9Y5S2 1711 aa8.53□□□□□ -1.04
LINC00667-201ENST00000577439 NOP58Q9Y2X3 529 aaKnown RBP8.53□□□□□ -1.04
LINC00667-201ENST00000577439 CNGB1Q14028 1251 aaPredicted RBP8.53□□□□□ -1.04
LINC00667-201ENST00000577439 UNC13BO14795 1591 aa8.53□□□□□ -1.04
LINC00667-201ENST00000577439 TMC1Q8TDI8 760 aa8.52□□□□□ -1.05
LINC00667-201ENST00000577439 MYO5CQ9NQX4 1742 aa8.52□□□□□ -1.05
LINC00667-201ENST00000577439 STK24Q9Y6E0 443 aa8.52□□□□□ -1.05
LINC00667-201ENST00000577439 CCDC141Q6ZP82 1450 aa8.51□□□□□ -1.05
LINC00667-201ENST00000577439 ST20-MTHFSA0A0A6YYL1 179 aa8.51□□□□□ -1.05
LINC00667-201ENST00000577439 RALBP1Q15311 655 aa8.51□□□□□ -1.05
LINC00667-201ENST00000577439 PRAG1Q86YV5 1406 aa8.51□□□□□ -1.05
LINC00667-201ENST00000577439 PARD3Q8TEW0 1356 aa8.51□□□□□ -1.05
LINC00667-201ENST00000577439 MAST1Q9Y2H9 1570 aa8.51□□□□□ -1.05
LINC00667-201ENST00000577439 CHMP7Q8WUX9 453 aaPredicted RBP8.51□□□□□ -1.05
LINC00667-201ENST00000577439 AK7Q96M32 723 aa8.51□□□□□ -1.05
LINC00667-201ENST00000577439 PLEKHG3A1L390 1219 aa8.5□□□□□ -1.05
LINC00667-201ENST00000577439 DCAF8L1A6NGE4 600 aa8.5□□□□□ -1.05
LINC00667-201ENST00000577439 E9PSI1 815 aa8.5□□□□□ -1.05
LINC00667-201ENST00000577439 PRDM15P57071 1507 aaPredicted RBP8.5□□□□□ -1.05
LINC00667-201ENST00000577439 FAM177A1Q8N128 213 aaPredicted RBP8.5□□□□□ -1.05
LINC00667-201ENST00000577439 COL17A1Q9UMD9 1497 aaPredicted RBP8.5□□□□□ -1.05
LINC00667-201ENST00000577439 ZMYM4Q5VZL5 1548 aa8.5□□□□□ -1.05
LINC00667-201ENST00000577439 PLEKHD1A6NEE1 506 aa8.5□□□□□ -1.05
LINC00667-201ENST00000577439 ZNF692Q9BU19 519 aaPredicted RBP8.5□□□□□ -1.05
LINC00667-201ENST00000577439 PAK3O75914 559 aaPredicted RBP8.49□□□□□ -1.05
LINC00667-201ENST00000577439 PDE4DQ08499 809 aa8.49□□□□□ -1.05
LINC00667-201ENST00000577439 JPH4Q96JJ6 628 aa8.49□□□□□ -1.05
LINC00667-201ENST00000577439 IQGAP3Q86VI3 1631 aa8.49□□□□□ -1.05
LINC00667-201ENST00000577439 EIF2AK4Q9P2K8 1649 aaKnown RBP8.49□□□□□ -1.05
LINC00667-201ENST00000577439 RRP1P56182 461 aaKnown RBP8.49□□□□□ -1.05
LINC00667-201ENST00000577439 ARHGEF1Q92888 912 aaKnown RBP8.49□□□□□ -1.05
LINC00667-201ENST00000577439 GPRASP1Q5JY77 1395 aa8.49□□□□□ -1.05
LINC00667-201ENST00000577439 DCAF11Q8TEB1 546 aa8.48□□□□□ -1.05
LINC00667-201ENST00000577439 STAG3Q9UJ98 1225 aa8.48□□□□□ -1.05
LINC00667-201ENST00000577439 PLXNC1O60486 1568 aa8.48□□□□□ -1.05
LINC00667-201ENST00000577439 RNF17Q9BXT8 1623 aaKnown RBP8.48□□□□□ -1.05
LINC00667-201ENST00000577439 SENP3-EIF4A1A0A087X0R7 540 aa8.48□□□□□ -1.05
LINC00667-201ENST00000577439 TSPY4P0CV99 314 aa8.48□□□□□ -1.05
LINC00667-201ENST00000577439 TSPY10P0CW01 314 aa8.48□□□□□ -1.05
LINC00667-201ENST00000577439 A2MP01023 1474 aa8.48□□□□□ -1.05
LINC00667-201ENST00000577439 CCDC144AA2RUR9 1427 aa8.47□□□□□ -1.05
LINC00667-201ENST00000577439 ANP32AP39687 249 aaKnown RBP8.47□□□□□ -1.05
LINC00667-201ENST00000577439 IPO9Q96P70 1041 aaKnown RBP8.47□□□□□ -1.05
LINC00667-201ENST00000577439 SYCP2Q9BX26 1530 aa8.47□□□□□ -1.05
LINC00667-201ENST00000577439 BLMP54132 1417 aaPredicted RBP8.47□□□□□ -1.05
LINC00667-201ENST00000577439 INSRP06213 1382 aa8.47□□□□□ -1.05
LINC00667-201ENST00000577439 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP8.47□□□□□ -1.05
LINC00667-201ENST00000577439 NLRP13Q86W25 1043 aa8.47□□□□□ -1.05
LINC00667-201ENST00000577439 ZFP91Q96JP5 570 aaPredicted RBP8.47□□□□□ -1.05
LINC00667-201ENST00000577439 PLA2R1Q13018 1463 aa8.47□□□□□ -1.05
LINC00667-201ENST00000577439 TRIM66O15016 1216 aa8.47□□□□□ -1.05
LINC00667-201ENST00000577439 TTC37Q6PGP7 1564 aa8.47□□□□□ -1.05
LINC00667-201ENST00000577439 HNRNPMP52272 730 aaKnown RBP eCLIP8.46□□□□□ -1.06
LINC00667-201ENST00000577439 FBXW7Q969H0 707 aa8.46□□□□□ -1.06
LINC00667-201ENST00000577439 PDE3BQ13370 1112 aa8.45□□□□□ -1.06
LINC00667-201ENST00000577439 RBM26Q5T8P6 1007 aaKnown RBP8.45□□□□□ -1.06
LINC00667-201ENST00000577439 MAGI2Q86UL8 1455 aa8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms