RNA–Protein interactions for RNA: ENST00000576462.1

SLC12A4-217, Transcript of solute carrier family 12 member 4, humanhuman

TSL 2

Gene SLC12A4, Length 673 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC12A4-217ENST00000576462 PPP1R15AO75807 674 aaPredicted RBP30.69■■■□□ 2.5
SLC12A4-217ENST00000576462 RGS17Q9UGC6 210 aaPredicted RBP30.67■■■□□ 2.5
SLC12A4-217ENST00000576462 NKTRP30414 1462 aaKnown RBP30.66■■■□□ 2.5
SLC12A4-217ENST00000576462 CHGAP10645 457 aaKnown RBP30.66■■■□□ 2.5
SLC12A4-217ENST00000576462 RIMS2Q9UQ26 1411 aa30.65■■■□□ 2.5
SLC12A4-217ENST00000576462 NWD1Q149M9 1564 aa30.65■■■□□ 2.5
SLC12A4-217ENST00000576462 ROBO1Q9Y6N7 1651 aa30.65■■■□□ 2.5
SLC12A4-217ENST00000576462 ZFYVE9O95405 1425 aa30.64■■■□□ 2.5
SLC12A4-217ENST00000576462 MYO5BQ9ULV0 1848 aa30.63■■■□□ 2.49
SLC12A4-217ENST00000576462 GCC2Q8IWJ2 1684 aa30.63■■■□□ 2.49
SLC12A4-217ENST00000576462 MSH6P52701 1360 aa30.63■■■□□ 2.49
SLC12A4-217ENST00000576462 PLEKHG1Q9ULL1 1385 aa30.63■■■□□ 2.49
SLC12A4-217ENST00000576462 HDGFP51858 240 aaKnown RBP30.62■■■□□ 2.49
SLC12A4-217ENST00000576462 TMEM131LA2VDJ0 1609 aa30.6■■■□□ 2.49
SLC12A4-217ENST00000576462 NUTM2DQ5VT03 806 aaPredicted RBP30.59■■■□□ 2.49
SLC12A4-217ENST00000576462 UNC13BO14795 1591 aa30.58■■■□□ 2.49
SLC12A4-217ENST00000576462 SLAIN2Q9P270 581 aa30.57■■■□□ 2.48
SLC12A4-217ENST00000576462 ITGAEP38570 1179 aa30.55■■■□□ 2.48
SLC12A4-217ENST00000576462 ABCF1Q8NE71 845 aaKnown RBP eCLIP30.54■■■□□ 2.48
SLC12A4-217ENST00000576462 E9PCH4 1651 aa30.53■■■□□ 2.48
SLC12A4-217ENST00000576462 CHD2O14647 1828 aaKnown RBP30.53■■■□□ 2.48
SLC12A4-217ENST00000576462 TBX22Q9Y458 520 aa30.53■■■□□ 2.48
SLC12A4-217ENST00000576462 C14orf37Q86TY3 774 aa30.51■■■□□ 2.47
SLC12A4-217ENST00000576462 ROCK1Q13464 1354 aa30.51■■■□□ 2.47
SLC12A4-217ENST00000576462 POTEAQ6S8J7 498 aa30.5■■■□□ 2.47
SLC12A4-217ENST00000576462 NUP155O75694 1391 aa30.49■■■□□ 2.47
SLC12A4-217ENST00000576462 IQGAP3Q86VI3 1631 aa30.47■■■□□ 2.47
SLC12A4-217ENST00000576462 PPARGC1BQ86YN6 1023 aaKnown RBP30.47■■■□□ 2.47
SLC12A4-217ENST00000576462 PHLPP1O60346 1717 aa30.47■■■□□ 2.47
SLC12A4-217ENST00000576462 ADAMTS13Q76LX8 1427 aa30.47■■■□□ 2.47
SLC12A4-217ENST00000576462 JCADQ9P266 1359 aa30.42■■■□□ 2.46
SLC12A4-217ENST00000576462 NCOA3Q9Y6Q9 1424 aa30.4■■■□□ 2.46
SLC12A4-217ENST00000576462 DIP2AQ14689 1571 aa30.39■■■□□ 2.46
SLC12A4-217ENST00000576462 ATF3P18847 181 aa30.38■■■□□ 2.45
SLC12A4-217ENST00000576462 CADPS2Q86UW7 1296 aa30.37■■■□□ 2.45
SLC12A4-217ENST00000576462 C19orf44Q9H6X5 657 aa30.37■■■□□ 2.45
SLC12A4-217ENST00000576462 PIK3R4Q99570 1358 aa30.37■■■□□ 2.45
SLC12A4-217ENST00000576462 AMOTL2Q9Y2J4 779 aa30.36■■■□□ 2.45
SLC12A4-217ENST00000576462 COL16A1Q07092 1604 aaPredicted RBP30.35■■■□□ 2.45
SLC12A4-217ENST00000576462 SIPA1L2Q9P2F8 1722 aaPredicted RBP30.35■■■□□ 2.45
SLC12A4-217ENST00000576462 TRPM2O94759 1503 aa30.34■■■□□ 2.45
SLC12A4-217ENST00000576462 PTPRUQ92729 1446 aa30.33■■■□□ 2.45
SLC12A4-217ENST00000576462 ZNF326Q5BKZ1 582 aaKnown RBP30.31■■■□□ 2.44
SLC12A4-217ENST00000576462 MEX3CQ5U5Q3 659 aaKnown RBP30.28■■■□□ 2.44
SLC12A4-217ENST00000576462 LRP6O75581 1613 aa30.26■■■□□ 2.44
SLC12A4-217ENST00000576462 SPATA31A6Q5VVP1 1343 aa30.25■■■□□ 2.43
SLC12A4-217ENST00000576462 SPHKAPQ2M3C7 1700 aa30.25■■■□□ 2.43
SLC12A4-217ENST00000576462 BRINP3Q76B58 766 aa30.24■■■□□ 2.43
SLC12A4-217ENST00000576462 AHDC1Q5TGY3 1603 aaPredicted RBP30.24■■■□□ 2.43
SLC12A4-217ENST00000576462 NRXN3Q9Y4C0 1643 aa30.24■■■□□ 2.43
SLC12A4-217ENST00000576462 SETD1AO15047 1707 aaKnown RBP30.23■■■□□ 2.43
SLC12A4-217ENST00000576462 SETBP1Q9Y6X0 1596 aa30.21■■■□□ 2.43
SLC12A4-217ENST00000576462 METP08581 1390 aa30.19■■■□□ 2.42
SLC12A4-217ENST00000576462 XRN1Q8IZH2 1706 aaKnown RBP30.19■■■□□ 2.42
SLC12A4-217ENST00000576462 NUTM2BA6NNL0 878 aaPredicted RBP30.17■■■□□ 2.42
SLC12A4-217ENST00000576462 NUTM2EB1AL46 878 aaPredicted RBP30.17■■■□□ 2.42
SLC12A4-217ENST00000576462 NUTM2AQ8IVF1 878 aaPredicted RBP30.17■■■□□ 2.42
SLC12A4-217ENST00000576462 SHPRHQ149N8 1683 aa30.17■■■□□ 2.42
SLC12A4-217ENST00000576462 DCCP43146 1447 aa30.16■■■□□ 2.42
SLC12A4-217ENST00000576462 ZNF772Q68DY9 489 aaPredicted RBP30.15■■■□□ 2.42
SLC12A4-217ENST00000576462 CLTCL1P53675 1640 aa30.14■■■□□ 2.42
SLC12A4-217ENST00000576462 ASXL1Q8IXJ9 1541 aa30.14■■■□□ 2.42
SLC12A4-217ENST00000576462 TRIM52Q96A61 297 aa30.13■■■□□ 2.41
SLC12A4-217ENST00000576462 MST1RQ04912 1400 aa30.13■■■□□ 2.41
SLC12A4-217ENST00000576462 NEXMIFQ5QGS0 1516 aa30.12■■■□□ 2.41
SLC12A4-217ENST00000576462 NAIPQ13075 1403 aa30.08■■■□□ 2.41
SLC12A4-217ENST00000576462 DDX17Q92841 729 aaKnown RBP30.08■■■□□ 2.41
SLC12A4-217ENST00000576462 ADGRL3Q9HAR2 1447 aa30.06■■■□□ 2.4
SLC12A4-217ENST00000576462 RRBP1Q9P2E9 1410 aaKnown RBP30.06■■■□□ 2.4
SLC12A4-217ENST00000576462 SETD5Q9C0A6 1442 aa30.05■■■□□ 2.4
SLC12A4-217ENST00000576462 KIF1BO60333 1816 aa30.03■■■□□ 2.4
SLC12A4-217ENST00000576462 RXRBP28702 533 aa30.03■■■□□ 2.4
SLC12A4-217ENST00000576462 LRRC59Q96AG4 307 aaKnown RBP30.03■■■□□ 2.4
SLC12A4-217ENST00000576462 NHSL1Q5SYE7 1610 aa30.03■■■□□ 2.4
SLC12A4-217ENST00000576462 NALCNQ8IZF0 1738 aa30.02■■■□□ 2.4
SLC12A4-217ENST00000576462 AFF2P51816 1311 aa30.01■■■□□ 2.4
SLC12A4-217ENST00000576462 VGFO15240 615 aaPredicted RBP29.98■■■□□ 2.39
SLC12A4-217ENST00000576462 UPF1Q92900 1129 aaKnown RBP eCLIP29.98■■■□□ 2.39
SLC12A4-217ENST00000576462 C8orf37Q96NL8 207 aa29.96■■■□□ 2.39
SLC12A4-217ENST00000576462 SLC4A1APQ9BWU0 796 aaKnown RBP29.96■■■□□ 2.39
SLC12A4-217ENST00000576462 PNPLA6Q8IY17 1366 aa29.95■■■□□ 2.39
SLC12A4-217ENST00000576462 C1orf167Q5SNV9 1468 aa29.94■■■□□ 2.38
SLC12A4-217ENST00000576462 ROBO2Q9HCK4 1378 aa29.94■■■□□ 2.38
SLC12A4-217ENST00000576462 PTCH1Q13635 1447 aa29.93■■■□□ 2.38
SLC12A4-217ENST00000576462 HFM1A2PYH4 1435 aa29.91■■■□□ 2.38
SLC12A4-217ENST00000576462 ORAI2Q96SN7 254 aa29.91■■■□□ 2.38
SLC12A4-217ENST00000576462 RPGRIP1LQ68CZ1 1315 aa29.9■■■□□ 2.38
SLC12A4-217ENST00000576462 ADAMTS2O95450 1211 aa29.89■■■□□ 2.38
SLC12A4-217ENST00000576462 QTRT2Q9H974 415 aaKnown RBP29.88■■■□□ 2.37
SLC12A4-217ENST00000576462 FOXD1Q16676 465 aa29.87■■■□□ 2.37
SLC12A4-217ENST00000576462 CDK12Q9NYV4 1490 aaPredicted RBP29.87■■■□□ 2.37
SLC12A4-217ENST00000576462 NGLY1Q96IV0 654 aa29.85■■■□□ 2.37
SLC12A4-217ENST00000576462 PPLO60437 1756 aa29.82■■■□□ 2.36
SLC12A4-217ENST00000576462 SOS2Q07890 1332 aaPredicted RBP29.82■■■□□ 2.36
SLC12A4-217ENST00000576462 RBM6P78332 1123 aaKnown RBP29.82■■■□□ 2.36
SLC12A4-217ENST00000576462 RGS12O14924 1447 aa29.8■■■□□ 2.36
SLC12A4-217ENST00000576462 PRAG1Q86YV5 1406 aa29.79■■■□□ 2.36
SLC12A4-217ENST00000576462 LAMC1P11047 1609 aa29.78■■■□□ 2.36
SLC12A4-217ENST00000576462 RGL3Q3MIN7 710 aa29.77■■■□□ 2.36
SLC12A4-217ENST00000576462 ADGRF5Q8IZF2 1346 aa29.76■■■□□ 2.36
Retrieved 100 of 20,778 RNA–protein pairs in 66.9 ms