RNA–Protein interactions for RNA: ENST00000576033.5

CCDC40-215, Transcript of coiled-coil domain containing 40, humanhuman

TSL 4

Gene CCDC40, Length 466 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-215ENST00000576033 CCDC144AA2RUR9 1427 aa11.71□□□□□ -0.53
CCDC40-215ENST00000576033 THEMISQ8N1K5 641 aaPredicted RBP11.71□□□□□ -0.53
CCDC40-215ENST00000576033 SLC52A1Q9NWF4 448 aa11.71□□□□□ -0.53
CCDC40-215ENST00000576033 SETD1AO15047 1707 aaKnown RBP11.71□□□□□ -0.54
CCDC40-215ENST00000576033 SPATA31E1Q6ZUB1 1445 aa11.7□□□□□ -0.54
CCDC40-215ENST00000576033 DHX57Q6P158 1386 aaKnown RBP11.7□□□□□ -0.54
CCDC40-215ENST00000576033 ANKRD30BQ9BXX2 1392 aa11.7□□□□□ -0.54
CCDC40-215ENST00000576033 LTBP4Q8N2S1 1624 aa11.7□□□□□ -0.54
CCDC40-215ENST00000576033 ZNF335Q9H4Z2 1342 aaPredicted RBP11.69□□□□□ -0.54
CCDC40-215ENST00000576033 TXNDC2Q86VQ3 553 aa11.68□□□□□ -0.54
CCDC40-215ENST00000576033 ZNF326Q5BKZ1 582 aaKnown RBP11.67□□□□□ -0.54
CCDC40-215ENST00000576033 ANKLE2Q86XL3 938 aa11.67□□□□□ -0.54
CCDC40-215ENST00000576033 XIRP1Q702N8 1843 aaKnown RBP11.67□□□□□ -0.54
CCDC40-215ENST00000576033 HRCP23327 699 aa11.66□□□□□ -0.54
CCDC40-215ENST00000576033 SLC26A8Q96RN1 970 aa11.66□□□□□ -0.54
CCDC40-215ENST00000576033 ADAMTS13Q76LX8 1427 aa11.66□□□□□ -0.54
CCDC40-215ENST00000576033 ASXL1Q8IXJ9 1541 aa11.65□□□□□ -0.54
CCDC40-215ENST00000576033 RGL3Q3MIN7 710 aa11.65□□□□□ -0.54
CCDC40-215ENST00000576033 SETBP1Q9Y6X0 1596 aa11.65□□□□□ -0.54
CCDC40-215ENST00000576033 PLEKHG1Q9ULL1 1385 aa11.65□□□□□ -0.55
CCDC40-215ENST00000576033 NWD1Q149M9 1564 aa11.64□□□□□ -0.55
CCDC40-215ENST00000576033 PPP1R15AO75807 674 aaPredicted RBP11.64□□□□□ -0.55
CCDC40-215ENST00000576033 CHD2O14647 1828 aaKnown RBP11.63□□□□□ -0.55
CCDC40-215ENST00000576033 SIN3AQ96ST3 1273 aa11.63□□□□□ -0.55
CCDC40-215ENST00000576033 EID1Q9Y6B2 187 aa11.62□□□□□ -0.55
CCDC40-215ENST00000576033 XRN1Q8IZH2 1706 aaKnown RBP11.62□□□□□ -0.55
CCDC40-215ENST00000576033 DIP2AQ14689 1571 aa11.62□□□□□ -0.55
CCDC40-215ENST00000576033 ADGRF5Q8IZF2 1346 aa11.61□□□□□ -0.55
CCDC40-215ENST00000576033 PTPRUQ92729 1446 aa11.61□□□□□ -0.55
CCDC40-215ENST00000576033 ALKQ9UM73 1620 aa11.61□□□□□ -0.55
CCDC40-215ENST00000576033 RBM33Q96EV2 1170 aaKnown RBP11.6□□□□□ -0.55
CCDC40-215ENST00000576033 BCANQ96GW7 911 aa11.6□□□□□ -0.55
CCDC40-215ENST00000576033 MYOM2P54296 1465 aa11.59□□□□□ -0.55
CCDC40-215ENST00000576033 METP08581 1390 aa11.59□□□□□ -0.55
CCDC40-215ENST00000576033 DMRT2Q9Y5R5 561 aa11.59□□□□□ -0.55
CCDC40-215ENST00000576033 PIK3C2GO75747 1445 aa11.59□□□□□ -0.55
CCDC40-215ENST00000576033 NRXN1Q9ULB1 1477 aa11.58□□□□□ -0.56
CCDC40-215ENST00000576033 LRRC7Q96NW7 1537 aa11.58□□□□□ -0.56
CCDC40-215ENST00000576033 NEUROD1Q13562 356 aa11.57□□□□□ -0.56
CCDC40-215ENST00000576033 NALCNQ8IZF0 1738 aa11.57□□□□□ -0.56
CCDC40-215ENST00000576033 ACIN1Q9UKV3 1341 aaKnown RBP11.57□□□□□ -0.56
CCDC40-215ENST00000576033 CPS1P31327 1500 aa11.56□□□□□ -0.56
CCDC40-215ENST00000576033 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.56□□□□□ -0.56
CCDC40-215ENST00000576033 KDM2AQ9Y2K7 1162 aa11.55□□□□□ -0.56
CCDC40-215ENST00000576033 LAMC1P11047 1609 aa11.55□□□□□ -0.56
CCDC40-215ENST00000576033 KNDC1Q76NI1 1749 aa11.55□□□□□ -0.56
CCDC40-215ENST00000576033 CERKQ8TCT0 537 aa11.54□□□□□ -0.56
CCDC40-215ENST00000576033 ADGRB1O14514 1584 aa11.54□□□□□ -0.56
CCDC40-215ENST00000576033 NKTRP30414 1462 aaKnown RBP11.53□□□□□ -0.56
CCDC40-215ENST00000576033 KCNA6P17658 529 aa11.53□□□□□ -0.56
CCDC40-215ENST00000576033 DCAF11Q8TEB1 546 aa11.53□□□□□ -0.56
CCDC40-215ENST00000576033 RPGRIP1LQ68CZ1 1315 aa11.53□□□□□ -0.56
CCDC40-215ENST00000576033 TRPM1Q7Z4N2 1603 aa11.53□□□□□ -0.56
CCDC40-215ENST00000576033 TMEM132EQ6IEE7 984 aa11.52□□□□□ -0.57
CCDC40-215ENST00000576033 PRAG1Q86YV5 1406 aa11.52□□□□□ -0.57
CCDC40-215ENST00000576033 CFAP70Q5T0N1 1121 aa11.51□□□□□ -0.57
CCDC40-215ENST00000576033 L3MBTL2Q969R5 705 aa11.51□□□□□ -0.57
CCDC40-215ENST00000576033 TBX22Q9Y458 520 aa11.51□□□□□ -0.57
CCDC40-215ENST00000576033 ARHGEF28Q8N1W1 1705 aaKnown RBP11.51□□□□□ -0.57
CCDC40-215ENST00000576033 SIPA1L2Q9P2F8 1722 aaPredicted RBP11.51□□□□□ -0.57
CCDC40-215ENST00000576033 TMEM94Q12767 1356 aa11.51□□□□□ -0.57
CCDC40-215ENST00000576033 VGFO15240 615 aaPredicted RBP11.5□□□□□ -0.57
CCDC40-215ENST00000576033 ROBO2Q9HCK4 1378 aa11.5□□□□□ -0.57
CCDC40-215ENST00000576033 PLEKHH1Q9ULM0 1364 aa11.5□□□□□ -0.57
CCDC40-215ENST00000576033 HDGFP51858 240 aaKnown RBP11.49□□□□□ -0.57
CCDC40-215ENST00000576033 AMOTL2Q9Y2J4 779 aa11.49□□□□□ -0.57
CCDC40-215ENST00000576033 KIAA1210Q9ULL0 1709 aa11.49□□□□□ -0.57
CCDC40-215ENST00000576033 STK26Q9P289 416 aa11.48□□□□□ -0.57
CCDC40-215ENST00000576033 IQSEC2Q5JU85 1478 aa11.47□□□□□ -0.57
CCDC40-215ENST00000576033 PTCH1Q13635 1447 aa11.47□□□□□ -0.57
CCDC40-215ENST00000576033 YTHDC2Q9H6S0 1430 aaKnown RBP11.47□□□□□ -0.57
CCDC40-215ENST00000576033 PIK3R4Q99570 1358 aa11.47□□□□□ -0.57
CCDC40-215ENST00000576033 NBPF8Q3BBV2 869 aa11.46□□□□□ -0.57
CCDC40-215ENST00000576033 PROSER2Q86WR7 435 aaPredicted RBP11.46□□□□□ -0.57
CCDC40-215ENST00000576033 LRPPRCP42704 1394 aaKnown RBP11.45□□□□□ -0.58
CCDC40-215ENST00000576033 TONSLQ96HA7 1378 aa11.45□□□□□ -0.58
CCDC40-215ENST00000576033 NBPF1Q3BBV0 1214 aa11.45□□□□□ -0.58
CCDC40-215ENST00000576033 CCER1Q8TC90 406 aaPredicted RBP11.45□□□□□ -0.58
CCDC40-215ENST00000576033 C14orf93Q9H972 538 aaKnown RBP11.45□□□□□ -0.58
CCDC40-215ENST00000576033 TECPR2O15040 1411 aa11.44□□□□□ -0.58
CCDC40-215ENST00000576033 ROBO1Q9Y6N7 1651 aa11.44□□□□□ -0.58
CCDC40-215ENST00000576033 WAPLQ7Z5K2 1190 aa11.44□□□□□ -0.58
CCDC40-215ENST00000576033 ILDR1Q86SU0 546 aaPredicted RBP11.44□□□□□ -0.58
CCDC40-215ENST00000576033 QRICH2Q9H0J4 1663 aa11.43□□□□□ -0.58
CCDC40-215ENST00000576033 UBAP1LF5GYI3 381 aa11.43□□□□□ -0.58
CCDC40-215ENST00000576033 ADGRL3Q9HAR2 1447 aa11.43□□□□□ -0.58
CCDC40-215ENST00000576033 RGPD8O14715 1765 aaPredicted RBP11.42□□□□□ -0.58
CCDC40-215ENST00000576033 PIP4K2BP78356 416 aa11.42□□□□□ -0.58
CCDC40-215ENST00000576033 SAFB2Q14151 953 aaKnown RBP eCLIP11.42□□□□□ -0.58
CCDC40-215ENST00000576033 FMN2Q9NZ56 1722 aa11.42□□□□□ -0.58
CCDC40-215ENST00000576033 SCAF1Q9H7N4 1312 aaKnown RBP11.41□□□□□ -0.58
CCDC40-215ENST00000576033 DLC1Q96QB1 1528 aa11.41□□□□□ -0.58
CCDC40-215ENST00000576033 RALGAPBQ86X10 1494 aa11.41□□□□□ -0.58
CCDC40-215ENST00000576033 TRAK1Q9UPV9 953 aa11.41□□□□□ -0.58
CCDC40-215ENST00000576033 USP32Q8NFA0 1604 aa11.41□□□□□ -0.58
CCDC40-215ENST00000576033 CDC42BPGQ6DT37 1551 aa11.41□□□□□ -0.58
CCDC40-215ENST00000576033 C14orf37Q86TY3 774 aa11.4□□□□□ -0.58
CCDC40-215ENST00000576033 MSH6P52701 1360 aa11.4□□□□□ -0.59
CCDC40-215ENST00000576033 ABCC11Q96J66 1382 aa11.4□□□□□ -0.59
CCDC40-215ENST00000576033 ADGRB2O60241 1585 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms