RNA–Protein interactions for RNA: ENST00000575333.5

TOM1L1-220, Transcript of target of myb1 like 1 membrane trafficking protein, humanhuman

TSL 1 (best) BASIC

Gene TOM1L1, Length 1,849 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1L1-220ENST00000575333 AKNAQ7Z591 1439 aa10.12□□□□□ -0.79
TOM1L1-220ENST00000575333 AQRO60306 1485 aaKnown RBP eCLIP10.12□□□□□ -0.79
TOM1L1-220ENST00000575333 KIF21BO75037 1637 aa10.11□□□□□ -0.79
TOM1L1-220ENST00000575333 TDRD9Q8NDG6 1382 aaKnown RBP10.11□□□□□ -0.79
TOM1L1-220ENST00000575333 EIF4G3O43432 1585 aaKnown RBP10.11□□□□□ -0.79
TOM1L1-220ENST00000575333 VGLL3A8MV65 326 aa10.11□□□□□ -0.79
TOM1L1-220ENST00000575333 ZSCAN30Q86W11 494 aa10.11□□□□□ -0.79
TOM1L1-220ENST00000575333 EFCAB3Q8N7B9 438 aa10.11□□□□□ -0.79
TOM1L1-220ENST00000575333 SIN3AQ96ST3 1273 aa10.11□□□□□ -0.79
TOM1L1-220ENST00000575333 BECN1Q14457 450 aa10.1□□□□□ -0.79
TOM1L1-220ENST00000575333 CSPP1Q1MSJ5 1256 aa10.1□□□□□ -0.79
TOM1L1-220ENST00000575333 FHAD1B1AJZ9 1412 aa10.1□□□□□ -0.79
TOM1L1-220ENST00000575333 ERBB4Q15303 1308 aa10.1□□□□□ -0.79
TOM1L1-220ENST00000575333 GRIPAP1Q4V328 841 aa10.1□□□□□ -0.79
TOM1L1-220ENST00000575333 HS1BP3Q53T59 392 aa10.1□□□□□ -0.79
TOM1L1-220ENST00000575333 ABCA10Q8WWZ4 1543 aa10.09□□□□□ -0.79
TOM1L1-220ENST00000575333 CNTLNQ9NXG0 1405 aa10.09□□□□□ -0.79
TOM1L1-220ENST00000575333 HDAC5Q9UQL6 1122 aa10.09□□□□□ -0.79
TOM1L1-220ENST00000575333 CCDC173Q0VFZ6 552 aa10.08□□□□□ -0.8
TOM1L1-220ENST00000575333 GRPEL1Q9HAV7 217 aa10.08□□□□□ -0.8
TOM1L1-220ENST00000575333 GEMIN8Q9NWZ8 242 aaKnown RBP10.08□□□□□ -0.8
TOM1L1-220ENST00000575333 VIRMAQ69YN4 1812 aaKnown RBP10.08□□□□□ -0.8
TOM1L1-220ENST00000575333 TTLL13PA6NNM8 815 aa10.07□□□□□ -0.8
TOM1L1-220ENST00000575333 MSNP26038 577 aaKnown RBP10.07□□□□□ -0.8
TOM1L1-220ENST00000575333 WWC1Q8IX03 1113 aa10.07□□□□□ -0.8
TOM1L1-220ENST00000575333 MFRPQ9BY79 579 aa10.07□□□□□ -0.8
TOM1L1-220ENST00000575333 BMP2KQ9NSY1 1161 aaPredicted RBP10.07□□□□□ -0.8
TOM1L1-220ENST00000575333 MCCP23508 829 aa10.07□□□□□ -0.8
TOM1L1-220ENST00000575333 FAM193AP78312 1265 aa10.07□□□□□ -0.8
TOM1L1-220ENST00000575333 FAM161AQ3B820 660 aa10.07□□□□□ -0.8
TOM1L1-220ENST00000575333 CEP120Q8N960 986 aa10.07□□□□□ -0.8
TOM1L1-220ENST00000575333 PRDM10Q9NQV6 1147 aa10.07□□□□□ -0.8
TOM1L1-220ENST00000575333 UQCRHLA0A096LP55 91 aa10.06□□□□□ -0.8
TOM1L1-220ENST00000575333 APPP05067 770 aa10.06□□□□□ -0.8
TOM1L1-220ENST00000575333 UQCRHP07919 91 aa10.06□□□□□ -0.8
TOM1L1-220ENST00000575333 HMGB1P09429 215 aaKnown RBP10.06□□□□□ -0.8
TOM1L1-220ENST00000575333 PANK2Q9BZ23 570 aa10.06□□□□□ -0.8
TOM1L1-220ENST00000575333 ERICH3Q5RHP9 1530 aa10.06□□□□□ -0.8
TOM1L1-220ENST00000575333 GAPVD1Q14C86 1478 aa10.05□□□□□ -0.8
TOM1L1-220ENST00000575333 NINLQ9Y2I6 1382 aa10.05□□□□□ -0.8
TOM1L1-220ENST00000575333 CCDC66A2RUB6 948 aa10.05□□□□□ -0.8
TOM1L1-220ENST00000575333 GABBR2O75899 941 aa10.05□□□□□ -0.8
TOM1L1-220ENST00000575333 PHF14O94880 888 aa10.05□□□□□ -0.8
TOM1L1-220ENST00000575333 TIE1P35590 1138 aa10.05□□□□□ -0.8
TOM1L1-220ENST00000575333 ABCA5Q8WWZ7 1642 aa10.05□□□□□ -0.8
TOM1L1-220ENST00000575333 SCAPERQ9BY12 1400 aa10.05□□□□□ -0.8
TOM1L1-220ENST00000575333 UBTFP17480 764 aaKnown RBP10.05□□□□□ -0.8
TOM1L1-220ENST00000575333 RALBP1Q15311 655 aa10.05□□□□□ -0.8
TOM1L1-220ENST00000575333 CCDC144AA2RUR9 1427 aa10.05□□□□□ -0.8
TOM1L1-220ENST00000575333 KTN1Q86UP2 1357 aaKnown RBP10.04□□□□□ -0.8
TOM1L1-220ENST00000575333 PBRM1Q86U86 1689 aa10.04□□□□□ -0.8
TOM1L1-220ENST00000575333 TICAM2Q86XR7 235 aa10.04□□□□□ -0.8
TOM1L1-220ENST00000575333 PHF8Q9UPP1 1060 aa10.04□□□□□ -0.8
TOM1L1-220ENST00000575333 ZNF500O60304 480 aaPredicted RBP10.03□□□□□ -0.8
TOM1L1-220ENST00000575333 MCM5P33992 734 aa10.03□□□□□ -0.8
TOM1L1-220ENST00000575333 SASS6Q6UVJ0 657 aa10.03□□□□□ -0.8
TOM1L1-220ENST00000575333 PPP1R9BQ96SB3 815 aa10.03□□□□□ -0.8
TOM1L1-220ENST00000575333 GRIN2BQ13224 1484 aa10.03□□□□□ -0.8
TOM1L1-220ENST00000575333 RAB3GAP2Q9H2M9 1393 aa10.03□□□□□ -0.8
TOM1L1-220ENST00000575333 SLC4A3P48751 1232 aa10.03□□□□□ -0.8
TOM1L1-220ENST00000575333 RRP1P56182 461 aaKnown RBP10.03□□□□□ -0.8
TOM1L1-220ENST00000575333 KDM2AQ9Y2K7 1162 aa10.03□□□□□ -0.8
TOM1L1-220ENST00000575333 CCNB3Q8WWL7 1395 aa10.02□□□□□ -0.81
TOM1L1-220ENST00000575333 CLCN6P51797 869 aa10.02□□□□□ -0.81
TOM1L1-220ENST00000575333 IRX5P78411 483 aaPredicted RBP10.02□□□□□ -0.81
TOM1L1-220ENST00000575333 CC2D1BQ5T0F9 858 aaKnown RBP10.02□□□□□ -0.81
TOM1L1-220ENST00000575333 MRS2Q9HD23 443 aa10.02□□□□□ -0.81
TOM1L1-220ENST00000575333 KIF27Q86VH2 1401 aa10.01□□□□□ -0.81
TOM1L1-220ENST00000575333 SNAPC4Q5SXM2 1469 aa10.01□□□□□ -0.81
TOM1L1-220ENST00000575333 DDX11L8A8MPP1 907 aa10.01□□□□□ -0.81
TOM1L1-220ENST00000575333 GOLGA2Q08379 1002 aa10.01□□□□□ -0.81
TOM1L1-220ENST00000575333 NBPF1Q3BBV0 1214 aa10.01□□□□□ -0.81
TOM1L1-220ENST00000575333 FBXO22Q8NEZ5 403 aa10.01□□□□□ -0.81
TOM1L1-220ENST00000575333 SOX12O15370 315 aa10□□□□□ -0.81
TOM1L1-220ENST00000575333 CLSTN1O94985 981 aa10□□□□□ -0.81
TOM1L1-220ENST00000575333 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10□□□□□ -0.81
TOM1L1-220ENST00000575333 EFCC1Q9HA90 598 aa10□□□□□ -0.81
TOM1L1-220ENST00000575333 RYDENQ9NUL5 291 aaKnown RBP10□□□□□ -0.81
TOM1L1-220ENST00000575333 CGNQ9P2M7 1197 aaKnown RBP10□□□□□ -0.81
TOM1L1-220ENST00000575333 KCNG1Q9UIX4 513 aa10□□□□□ -0.81
TOM1L1-220ENST00000575333 TRIM35Q9UPQ4 493 aa10□□□□□ -0.81
TOM1L1-220ENST00000575333 R3HCC1Q9Y3T6 440 aaKnown RBP10□□□□□ -0.81
TOM1L1-220ENST00000575333 CCDC9Q9Y3X0 531 aaKnown RBP10□□□□□ -0.81
TOM1L1-220ENST00000575333 SETD5Q9C0A6 1442 aa10□□□□□ -0.81
TOM1L1-220ENST00000575333 MCM4P33991 863 aa10□□□□□ -0.81
TOM1L1-220ENST00000575333 ATN1P54259 1190 aaPredicted RBP9.99□□□□□ -0.81
TOM1L1-220ENST00000575333 GABPB1Q06547 395 aaPredicted RBP9.99□□□□□ -0.81
TOM1L1-220ENST00000575333 PRKRIP1Q9H875 184 aaPredicted RBP9.99□□□□□ -0.81
TOM1L1-220ENST00000575333 KIF3AQ9Y496 699 aa9.99□□□□□ -0.81
TOM1L1-220ENST00000575333 PPP1R37O75864 691 aa9.98□□□□□ -0.81
TOM1L1-220ENST00000575333 FAM9BQ8IZU0 186 aa9.98□□□□□ -0.81
TOM1L1-220ENST00000575333 GTF3C5Q9Y5Q8 519 aaPredicted RBP9.98□□□□□ -0.81
TOM1L1-220ENST00000575333 MAGI1Q96QZ7 1491 aaPredicted RBP9.98□□□□□ -0.81
TOM1L1-220ENST00000575333 NLRP6P59044 892 aa9.98□□□□□ -0.81
TOM1L1-220ENST00000575333 MKRN3Q13064 507 aaKnown RBP9.98□□□□□ -0.81
TOM1L1-220ENST00000575333 RUSC2Q8N2Y8 1516 aa9.98□□□□□ -0.81
TOM1L1-220ENST00000575333 ANTXR1Q9H6X2 564 aa9.98□□□□□ -0.81
TOM1L1-220ENST00000575333 CHD1O14646 1710 aa9.97□□□□□ -0.81
TOM1L1-220ENST00000575333 ATMINO43313 823 aaPredicted RBP9.97□□□□□ -0.81
TOM1L1-220ENST00000575333 CREBRFQ8IUR6 639 aa9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms