RNA–Protein interactions for RNA: ENST00000575313.1

CLDN7-208, Transcript of claudin 7, humanhuman

TSL 3

Gene CLDN7, Length 605 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN7-208ENST00000575313 RIMS2Q9UQ26 1411 aa26.23■■□□□ 1.79
CLDN7-208ENST00000575313 KIF1BO60333 1816 aa26.23■■□□□ 1.79
CLDN7-208ENST00000575313 ABCF1Q8NE71 845 aaKnown RBP eCLIP26.22■■□□□ 1.79
CLDN7-208ENST00000575313 IQGAP1P46940 1657 aa26.21■■□□□ 1.79
CLDN7-208ENST00000575313 ZNF326Q5BKZ1 582 aaKnown RBP26.19■■□□□ 1.78
CLDN7-208ENST00000575313 PPP1R15AO75807 674 aaPredicted RBP26.18■■□□□ 1.78
CLDN7-208ENST00000575313 ANKRD30BQ9BXX2 1392 aa26.18■■□□□ 1.78
CLDN7-208ENST00000575313 PLEKHG1Q9ULL1 1385 aa26.14■■□□□ 1.78
CLDN7-208ENST00000575313 RPGRIP1LQ68CZ1 1315 aa26.13■■□□□ 1.77
CLDN7-208ENST00000575313 DHX57Q6P158 1386 aaKnown RBP26.12■■□□□ 1.77
CLDN7-208ENST00000575313 SPATA31E1Q6ZUB1 1445 aa26.11■■□□□ 1.77
CLDN7-208ENST00000575313 NEXMIFQ5QGS0 1516 aa26.1■■□□□ 1.77
CLDN7-208ENST00000575313 BCANQ96GW7 911 aa26.1■■□□□ 1.77
CLDN7-208ENST00000575313 NUTM2DQ5VT03 806 aaPredicted RBP26.08■■□□□ 1.77
CLDN7-208ENST00000575313 ZNF335Q9H4Z2 1342 aaPredicted RBP26.08■■□□□ 1.77
CLDN7-208ENST00000575313 VGFO15240 615 aaPredicted RBP26.05■■□□□ 1.76
CLDN7-208ENST00000575313 CCER1Q8TC90 406 aaPredicted RBP26.05■■□□□ 1.76
CLDN7-208ENST00000575313 LTBP4Q8N2S1 1624 aa26.04■■□□□ 1.76
CLDN7-208ENST00000575313 RGL3Q3MIN7 710 aa26.04■■□□□ 1.76
CLDN7-208ENST00000575313 SLC26A8Q96RN1 970 aa26.04■■□□□ 1.76
CLDN7-208ENST00000575313 PPLO60437 1756 aa26.01■■□□□ 1.75
CLDN7-208ENST00000575313 DIP2AQ14689 1571 aa26.01■■□□□ 1.75
CLDN7-208ENST00000575313 TBX22Q9Y458 520 aa26.01■■□□□ 1.75
CLDN7-208ENST00000575313 SETBP1Q9Y6X0 1596 aa26■■□□□ 1.75
CLDN7-208ENST00000575313 CPS1P31327 1500 aa25.99■■□□□ 1.75
CLDN7-208ENST00000575313 ADAMTS13Q76LX8 1427 aa25.99■■□□□ 1.75
CLDN7-208ENST00000575313 SENP3Q9H4L4 574 aaPredicted RBP25.99■■□□□ 1.75
CLDN7-208ENST00000575313 CERKQ8TCT0 537 aa25.98■■□□□ 1.75
CLDN7-208ENST00000575313 IFT172Q9UG01 1749 aa25.96■■□□□ 1.75
CLDN7-208ENST00000575313 NRXN3Q9Y4C0 1643 aa25.95■■□□□ 1.74
CLDN7-208ENST00000575313 PIK3R4Q99570 1358 aa25.95■■□□□ 1.74
CLDN7-208ENST00000575313 KCNA6P17658 529 aa25.94■■□□□ 1.74
CLDN7-208ENST00000575313 IQSEC2Q5JU85 1478 aa25.92■■□□□ 1.74
CLDN7-208ENST00000575313 MYOM2P54296 1465 aa25.91■■□□□ 1.74
CLDN7-208ENST00000575313 ADGRF5Q8IZF2 1346 aa25.9■■□□□ 1.74
CLDN7-208ENST00000575313 CLSPNQ9HAW4 1339 aa25.9■■□□□ 1.74
CLDN7-208ENST00000575313 STRCP1A6NGW2 1772 aa25.9■■□□□ 1.74
CLDN7-208ENST00000575313 STAC3Q96MF2 364 aa25.9■■□□□ 1.74
CLDN7-208ENST00000575313 NWD1Q149M9 1564 aa25.9■■□□□ 1.74
CLDN7-208ENST00000575313 NKTRP30414 1462 aaKnown RBP25.87■■□□□ 1.73
CLDN7-208ENST00000575313 PIK3C2GO75747 1445 aa25.87■■□□□ 1.73
CLDN7-208ENST00000575313 CHD2O14647 1828 aaKnown RBP25.86■■□□□ 1.73
CLDN7-208ENST00000575313 ALKQ9UM73 1620 aa25.86■■□□□ 1.73
CLDN7-208ENST00000575313 DCAF11Q8TEB1 546 aa25.86■■□□□ 1.73
CLDN7-208ENST00000575313 NRXN1Q9ULB1 1477 aa25.85■■□□□ 1.73
CLDN7-208ENST00000575313 LRRC7Q96NW7 1537 aa25.85■■□□□ 1.73
CLDN7-208ENST00000575313 METP08581 1390 aa25.84■■□□□ 1.73
CLDN7-208ENST00000575313 SIN3AQ96ST3 1273 aa25.84■■□□□ 1.73
CLDN7-208ENST00000575313 SETD1AO15047 1707 aaKnown RBP25.82■■□□□ 1.72
CLDN7-208ENST00000575313 AMOTL2Q9Y2J4 779 aa25.81■■□□□ 1.72
CLDN7-208ENST00000575313 PTPRUQ92729 1446 aa25.8■■□□□ 1.72
CLDN7-208ENST00000575313 NEUROD1Q13562 356 aa25.8■■□□□ 1.72
CLDN7-208ENST00000575313 PROSER2Q86WR7 435 aaPredicted RBP25.8■■□□□ 1.72
CLDN7-208ENST00000575313 KDM2AQ9Y2K7 1162 aa25.8■■□□□ 1.72
CLDN7-208ENST00000575313 LAMC1P11047 1609 aa25.77■■□□□ 1.72
CLDN7-208ENST00000575313 XRN1Q8IZH2 1706 aaKnown RBP25.77■■□□□ 1.72
CLDN7-208ENST00000575313 C14orf93Q9H972 538 aaKnown RBP25.77■■□□□ 1.72
CLDN7-208ENST00000575313 TMEM94Q12767 1356 aa25.77■■□□□ 1.72
CLDN7-208ENST00000575313 ILDR1Q86SU0 546 aaPredicted RBP25.76■■□□□ 1.71
CLDN7-208ENST00000575313 FBXO41Q8TF61 875 aa25.75■■□□□ 1.71
CLDN7-208ENST00000575313 NCOA3Q9Y6Q9 1424 aa25.73■■□□□ 1.71
CLDN7-208ENST00000575313 L3MBTL2Q969R5 705 aa25.73■■□□□ 1.71
CLDN7-208ENST00000575313 PRAG1Q86YV5 1406 aa25.72■■□□□ 1.71
CLDN7-208ENST00000575313 CFAP70Q5T0N1 1121 aa25.72■■□□□ 1.71
CLDN7-208ENST00000575313 XIRP1Q702N8 1843 aaKnown RBP25.7■■□□□ 1.71
CLDN7-208ENST00000575313 PTCH1Q13635 1447 aa25.7■■□□□ 1.7
CLDN7-208ENST00000575313 LRPPRCP42704 1394 aaKnown RBP25.69■■□□□ 1.7
CLDN7-208ENST00000575313 ASXL1Q8IXJ9 1541 aa25.69■■□□□ 1.7
CLDN7-208ENST00000575313 UBAP1LF5GYI3 381 aa25.68■■□□□ 1.7
CLDN7-208ENST00000575313 TOM1O60784 492 aa25.68■■□□□ 1.7
CLDN7-208ENST00000575313 TMEM132EQ6IEE7 984 aa25.68■■□□□ 1.7
CLDN7-208ENST00000575313 RBM33Q96EV2 1170 aaKnown RBP25.68■■□□□ 1.7
CLDN7-208ENST00000575313 TONSLQ96HA7 1378 aa25.68■■□□□ 1.7
CLDN7-208ENST00000575313 MSH6P52701 1360 aa25.67■■□□□ 1.7
CLDN7-208ENST00000575313 TECPR2O15040 1411 aa25.66■■□□□ 1.7
CLDN7-208ENST00000575313 YTHDC2Q9H6S0 1430 aaKnown RBP25.66■■□□□ 1.7
CLDN7-208ENST00000575313 C14orf37Q86TY3 774 aa25.66■■□□□ 1.7
CLDN7-208ENST00000575313 ABCC11Q96J66 1382 aa25.66■■□□□ 1.7
CLDN7-208ENST00000575313 STK26Q9P289 416 aa25.64■■□□□ 1.7
CLDN7-208ENST00000575313 ROBO2Q9HCK4 1378 aa25.64■■□□□ 1.69
CLDN7-208ENST00000575313 ADGRB1O14514 1584 aa25.63■■□□□ 1.69
CLDN7-208ENST00000575313 KNDC1Q76NI1 1749 aa25.63■■□□□ 1.69
CLDN7-208ENST00000575313 KIAA1210Q9ULL0 1709 aa25.63■■□□□ 1.69
CLDN7-208ENST00000575313 C19orf44Q9H6X5 657 aa25.62■■□□□ 1.69
CLDN7-208ENST00000575313 TIMELESSQ9UNS1 1208 aa25.6■■□□□ 1.69
CLDN7-208ENST00000575313 SIRT1Q96EB6 747 aa25.59■■□□□ 1.69
CLDN7-208ENST00000575313 FAM135BQ49AJ0 1406 aa25.58■■□□□ 1.69
CLDN7-208ENST00000575313 ADGRL3Q9HAR2 1447 aa25.58■■□□□ 1.69
CLDN7-208ENST00000575313 DCCP43146 1447 aa25.57■■□□□ 1.68
CLDN7-208ENST00000575313 CADPS2Q86UW7 1296 aa25.56■■□□□ 1.68
CLDN7-208ENST00000575313 DLC1Q96QB1 1528 aa25.56■■□□□ 1.68
CLDN7-208ENST00000575313 ATF3P18847 181 aa25.55■■□□□ 1.68
CLDN7-208ENST00000575313 ZEB1P37275 1124 aaPredicted RBP25.55■■□□□ 1.68
CLDN7-208ENST00000575313 SIPA1L2Q9P2F8 1722 aaPredicted RBP25.54■■□□□ 1.68
CLDN7-208ENST00000575313 PIP4K2BP78356 416 aa25.53■■□□□ 1.68
CLDN7-208ENST00000575313 NALCNQ8IZF0 1738 aa25.52■■□□□ 1.68
CLDN7-208ENST00000575313 WAPLQ7Z5K2 1190 aa25.52■■□□□ 1.68
CLDN7-208ENST00000575313 SCAF1Q9H7N4 1312 aaKnown RBP25.52■■□□□ 1.68
CLDN7-208ENST00000575313 NBPF1Q3BBV0 1214 aa25.51■■□□□ 1.67
CLDN7-208ENST00000575313 TRAK1Q9UPV9 953 aa25.51■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 75.5 ms