RNA–Protein interactions for RNA: ENST00000574848.5

LITAF-216, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 4

Gene LITAF, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-216ENST00000574848 TRPM2O94759 1503 aa16.02■□□□□ 0.15
LITAF-216ENST00000574848 RIMS2Q9UQ26 1411 aa16.02■□□□□ 0.15
LITAF-216ENST00000574848 DIP2AQ14689 1571 aa16.01■□□□□ 0.15
LITAF-216ENST00000574848 NKTRP30414 1462 aaKnown RBP16.01■□□□□ 0.15
LITAF-216ENST00000574848 CLTCL1P53675 1640 aa15.99■□□□□ 0.15
LITAF-216ENST00000574848 CHD2O14647 1828 aaKnown RBP15.97■□□□□ 0.15
LITAF-216ENST00000574848 TOM1O60784 492 aa15.97■□□□□ 0.15
LITAF-216ENST00000574848 HDGFP51858 240 aaKnown RBP15.95■□□□□ 0.14
LITAF-216ENST00000574848 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.95■□□□□ 0.14
LITAF-216ENST00000574848 SETBP1Q9Y6X0 1596 aa15.95■□□□□ 0.14
LITAF-216ENST00000574848 ADAMTS13Q76LX8 1427 aa15.94■□□□□ 0.14
LITAF-216ENST00000574848 NRXN3Q9Y4C0 1643 aa15.94■□□□□ 0.14
LITAF-216ENST00000574848 KCNA6P17658 529 aa15.94■□□□□ 0.14
LITAF-216ENST00000574848 SLC26A8Q96RN1 970 aa15.93■□□□□ 0.14
LITAF-216ENST00000574848 KIF1BO60333 1816 aa15.93■□□□□ 0.14
LITAF-216ENST00000574848 NEXMIFQ5QGS0 1516 aa15.93■□□□□ 0.14
LITAF-216ENST00000574848 PIK3R4Q99570 1358 aa15.92■□□□□ 0.14
LITAF-216ENST00000574848 TMEM94Q12767 1356 aa15.91■□□□□ 0.14
LITAF-216ENST00000574848 TRIM26Q12899 539 aaPredicted RBP15.91■□□□□ 0.14
LITAF-216ENST00000574848 PPP1R15AO75807 674 aaPredicted RBP15.9■□□□□ 0.14
LITAF-216ENST00000574848 TBX22Q9Y458 520 aa15.9■□□□□ 0.14
LITAF-216ENST00000574848 XRN1Q8IZH2 1706 aaKnown RBP15.89■□□□□ 0.13
LITAF-216ENST00000574848 CHGAP10645 457 aaKnown RBP15.89■□□□□ 0.13
LITAF-216ENST00000574848 NCOA3Q9Y6Q9 1424 aa15.88■□□□□ 0.13
LITAF-216ENST00000574848 PIP4K2BP78356 416 aa15.87■□□□□ 0.13
LITAF-216ENST00000574848 HSPA1LP34931 641 aa15.86■□□□□ 0.13
LITAF-216ENST00000574848 SCAF1Q9H7N4 1312 aaKnown RBP15.85■□□□□ 0.13
LITAF-216ENST00000574848 SETD1AO15047 1707 aaKnown RBP15.85■□□□□ 0.13
LITAF-216ENST00000574848 FAM135BQ49AJ0 1406 aa15.85■□□□□ 0.13
LITAF-216ENST00000574848 TRIM52Q96A61 297 aa15.84■□□□□ 0.13
LITAF-216ENST00000574848 BCANQ96GW7 911 aa15.84■□□□□ 0.13
LITAF-216ENST00000574848 SLC4A1APQ9BWU0 796 aaKnown RBP15.84■□□□□ 0.13
LITAF-216ENST00000574848 PCGF6Q9BYE7 350 aa15.84■□□□□ 0.13
LITAF-216ENST00000574848 PPLO60437 1756 aa15.84■□□□□ 0.13
LITAF-216ENST00000574848 DISP3Q9P2K9 1392 aa15.84■□□□□ 0.13
LITAF-216ENST00000574848 PTPRUQ92729 1446 aa15.84■□□□□ 0.13
LITAF-216ENST00000574848 MED1Q15648 1581 aaPredicted RBP15.83■□□□□ 0.13
LITAF-216ENST00000574848 ROBO1Q9Y6N7 1651 aa15.83■□□□□ 0.13
LITAF-216ENST00000574848 PROSER2Q86WR7 435 aaPredicted RBP15.83■□□□□ 0.12
LITAF-216ENST00000574848 ACIN1Q9UKV3 1341 aaKnown RBP15.83■□□□□ 0.12
LITAF-216ENST00000574848 NUTM2DQ5VT03 806 aaPredicted RBP15.82■□□□□ 0.12
LITAF-216ENST00000574848 MSH6P52701 1360 aa15.82■□□□□ 0.12
LITAF-216ENST00000574848 PRAG1Q86YV5 1406 aa15.81■□□□□ 0.12
LITAF-216ENST00000574848 IFT172Q9UG01 1749 aa15.8■□□□□ 0.12
LITAF-216ENST00000574848 SETD5Q9C0A6 1442 aa15.8■□□□□ 0.12
LITAF-216ENST00000574848 SIPA1L2Q9P2F8 1722 aaPredicted RBP15.8■□□□□ 0.12
LITAF-216ENST00000574848 ZNF326Q5BKZ1 582 aaKnown RBP15.79■□□□□ 0.12
LITAF-216ENST00000574848 CCDC144AA2RUR9 1427 aa15.78■□□□□ 0.12
LITAF-216ENST00000574848 DCCP43146 1447 aa15.78■□□□□ 0.12
LITAF-216ENST00000574848 SPATA31E1Q6ZUB1 1445 aa15.78■□□□□ 0.12
LITAF-216ENST00000574848 RPGRIP1LQ68CZ1 1315 aa15.78■□□□□ 0.12
LITAF-216ENST00000574848 SENP3Q9H4L4 574 aaPredicted RBP15.78■□□□□ 0.12
LITAF-216ENST00000574848 METP08581 1390 aa15.77■□□□□ 0.12
LITAF-216ENST00000574848 RBM33Q96EV2 1170 aaKnown RBP15.76■□□□□ 0.11
LITAF-216ENST00000574848 MPHOSPH9Q99550 1183 aa15.76■□□□□ 0.11
LITAF-216ENST00000574848 PTCH1Q13635 1447 aa15.76■□□□□ 0.11
LITAF-216ENST00000574848 AMOTL2Q9Y2J4 779 aa15.75■□□□□ 0.11
LITAF-216ENST00000574848 RAB3GAP2Q9H2M9 1393 aa15.75■□□□□ 0.11
LITAF-216ENST00000574848 NALCNQ8IZF0 1738 aa15.74■□□□□ 0.11
LITAF-216ENST00000574848 VGFO15240 615 aaPredicted RBP15.74■□□□□ 0.11
LITAF-216ENST00000574848 FOXD1Q16676 465 aa15.73■□□□□ 0.11
LITAF-216ENST00000574848 COL16A1Q07092 1604 aaPredicted RBP15.72■□□□□ 0.11
LITAF-216ENST00000574848 AHDC1Q5TGY3 1603 aaPredicted RBP15.72■□□□□ 0.11
LITAF-216ENST00000574848 PHLPP1O60346 1717 aa15.72■□□□□ 0.11
LITAF-216ENST00000574848 ADGRL3Q9HAR2 1447 aa15.72■□□□□ 0.11
LITAF-216ENST00000574848 C19orf44Q9H6X5 657 aa15.72■□□□□ 0.11
LITAF-216ENST00000574848 ILDR2Q71H61 639 aa15.71■□□□□ 0.11
LITAF-216ENST00000574848 SLAIN2Q9P270 581 aa15.71■□□□□ 0.11
LITAF-216ENST00000574848 CADPS2Q86UW7 1296 aa15.7■□□□□ 0.1
LITAF-216ENST00000574848 ANKRD30BQ9BXX2 1392 aa15.7■□□□□ 0.1
LITAF-216ENST00000574848 PIK3C2GO75747 1445 aa15.68■□□□□ 0.1
LITAF-216ENST00000574848 MST1RQ04912 1400 aa15.68■□□□□ 0.1
LITAF-216ENST00000574848 KNDC1Q76NI1 1749 aa15.68■□□□□ 0.1
LITAF-216ENST00000574848 MYOM2P54296 1465 aa15.68■□□□□ 0.1
LITAF-216ENST00000574848 NRXN1Q9ULB1 1477 aa15.68■□□□□ 0.1
LITAF-216ENST00000574848 ASXL1Q8IXJ9 1541 aa15.68■□□□□ 0.1
LITAF-216ENST00000574848 LAMC1P11047 1609 aa15.67■□□□□ 0.1
LITAF-216ENST00000574848 NHSL1Q5SYE7 1610 aa15.67■□□□□ 0.1
LITAF-216ENST00000574848 TECPR2O15040 1411 aa15.67■□□□□ 0.1
LITAF-216ENST00000574848 HRCP23327 699 aa15.66■□□□□ 0.1
LITAF-216ENST00000574848 C14orf37Q86TY3 774 aa15.66■□□□□ 0.1
LITAF-216ENST00000574848 ROBO2Q9HCK4 1378 aa15.65■□□□□ 0.1
LITAF-216ENST00000574848 SHPRHQ149N8 1683 aa15.65■□□□□ 0.1
LITAF-216ENST00000574848 ATF3P18847 181 aa15.65■□□□□ 0.1
LITAF-216ENST00000574848 ADGRF5Q8IZF2 1346 aa15.65■□□□□ 0.1
LITAF-216ENST00000574848 CDC42BPGQ6DT37 1551 aa15.64■□□□□ 0.09
LITAF-216ENST00000574848 JCADQ9P266 1359 aa15.62■□□□□ 0.09
LITAF-216ENST00000574848 BRINP3Q76B58 766 aa15.61■□□□□ 0.09
LITAF-216ENST00000574848 LRPPRCP42704 1394 aaKnown RBP15.61■□□□□ 0.09
LITAF-216ENST00000574848 SOCS7O14512 581 aa15.6■□□□□ 0.09
LITAF-216ENST00000574848 RGL3Q3MIN7 710 aa15.6■□□□□ 0.09
LITAF-216ENST00000574848 C1orf167Q5SNV9 1468 aa15.59■□□□□ 0.09
LITAF-216ENST00000574848 ABCC11Q96J66 1382 aa15.59■□□□□ 0.09
LITAF-216ENST00000574848 PHF23Q9BUL5 403 aaPredicted RBP15.57■□□□□ 0.08
LITAF-216ENST00000574848 YTHDC2Q9H6S0 1430 aaKnown RBP15.57■□□□□ 0.08
LITAF-216ENST00000574848 SPATA31A6Q5VVP1 1343 aa15.56■□□□□ 0.08
LITAF-216ENST00000574848 LRP6O75581 1613 aa15.56■□□□□ 0.08
LITAF-216ENST00000574848 ADGRB1O14514 1584 aa15.55■□□□□ 0.08
LITAF-216ENST00000574848 FMN2Q9NZ56 1722 aa15.54■□□□□ 0.08
LITAF-216ENST00000574848 DLC1Q96QB1 1528 aa15.54■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 73.2 ms