RNA–Protein interactions for RNA: ENST00000574293.1

GSE1-214, Transcript of Gse1 coiled-coil protein, humanhuman

TSL 3

Gene GSE1, Length 777 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GSE1-214ENST00000574293 PCGF6Q9BYE7 350 aa22.93■■□□□ 1.26
GSE1-214ENST00000574293 MED14O60244 1454 aa22.92■■□□□ 1.26
GSE1-214ENST00000574293 PPP1R15AO75807 674 aaPredicted RBP22.92■■□□□ 1.26
GSE1-214ENST00000574293 KIF1BO60333 1816 aa22.91■■□□□ 1.26
GSE1-214ENST00000574293 ZFYVE9O95405 1425 aa22.91■■□□□ 1.26
GSE1-214ENST00000574293 ABCF1Q8NE71 845 aaKnown RBP eCLIP22.9■■□□□ 1.26
GSE1-214ENST00000574293 BCANQ96GW7 911 aa22.9■■□□□ 1.26
GSE1-214ENST00000574293 SENP3Q9H4L4 574 aaPredicted RBP22.9■■□□□ 1.26
GSE1-214ENST00000574293 ANKRD30BQ9BXX2 1392 aa22.89■■□□□ 1.26
GSE1-214ENST00000574293 IQGAP1P46940 1657 aa22.87■■□□□ 1.25
GSE1-214ENST00000574293 RGL3Q3MIN7 710 aa22.86■■□□□ 1.25
GSE1-214ENST00000574293 SLC26A8Q96RN1 970 aa22.83■■□□□ 1.25
GSE1-214ENST00000574293 ZNF335Q9H4Z2 1342 aaPredicted RBP22.82■■□□□ 1.24
GSE1-214ENST00000574293 PLEKHG1Q9ULL1 1385 aa22.82■■□□□ 1.24
GSE1-214ENST00000574293 RPGRIP1LQ68CZ1 1315 aa22.82■■□□□ 1.24
GSE1-214ENST00000574293 SPATA31E1Q6ZUB1 1445 aa22.81■■□□□ 1.24
GSE1-214ENST00000574293 NEXMIFQ5QGS0 1516 aa22.8■■□□□ 1.24
GSE1-214ENST00000574293 DHX57Q6P158 1386 aaKnown RBP22.79■■□□□ 1.24
GSE1-214ENST00000574293 VGFO15240 615 aaPredicted RBP22.78■■□□□ 1.24
GSE1-214ENST00000574293 LTBP4Q8N2S1 1624 aa22.73■■□□□ 1.23
GSE1-214ENST00000574293 TBX22Q9Y458 520 aa22.73■■□□□ 1.23
GSE1-214ENST00000574293 PPLO60437 1756 aa22.72■■□□□ 1.23
GSE1-214ENST00000574293 CERKQ8TCT0 537 aa22.72■■□□□ 1.23
GSE1-214ENST00000574293 ADAMTS13Q76LX8 1427 aa22.72■■□□□ 1.23
GSE1-214ENST00000574293 SIN3AQ96ST3 1273 aa22.71■■□□□ 1.23
GSE1-214ENST00000574293 ADGRF5Q8IZF2 1346 aa22.7■■□□□ 1.22
GSE1-214ENST00000574293 NEUROD1Q13562 356 aa22.68■■□□□ 1.22
GSE1-214ENST00000574293 SETBP1Q9Y6X0 1596 aa22.67■■□□□ 1.22
GSE1-214ENST00000574293 KCNA6P17658 529 aa22.67■■□□□ 1.22
GSE1-214ENST00000574293 DCAF11Q8TEB1 546 aa22.67■■□□□ 1.22
GSE1-214ENST00000574293 KDM2AQ9Y2K7 1162 aa22.67■■□□□ 1.22
GSE1-214ENST00000574293 NRXN3Q9Y4C0 1643 aa22.67■■□□□ 1.22
GSE1-214ENST00000574293 IFT172Q9UG01 1749 aa22.66■■□□□ 1.22
GSE1-214ENST00000574293 DIP2AQ14689 1571 aa22.66■■□□□ 1.22
GSE1-214ENST00000574293 CPS1P31327 1500 aa22.65■■□□□ 1.22
GSE1-214ENST00000574293 STRCP1A6NGW2 1772 aa22.65■■□□□ 1.22
GSE1-214ENST00000574293 METP08581 1390 aa22.62■■□□□ 1.21
GSE1-214ENST00000574293 PIK3R4Q99570 1358 aa22.61■■□□□ 1.21
GSE1-214ENST00000574293 PROSER2Q86WR7 435 aaPredicted RBP22.6■■□□□ 1.21
GSE1-214ENST00000574293 AMOTL2Q9Y2J4 779 aa22.6■■□□□ 1.21
GSE1-214ENST00000574293 ALKQ9UM73 1620 aa22.6■■□□□ 1.21
GSE1-214ENST00000574293 MYOM2P54296 1465 aa22.6■■□□□ 1.21
GSE1-214ENST00000574293 CHD2O14647 1828 aaKnown RBP22.59■■□□□ 1.21
GSE1-214ENST00000574293 PIK3C2GO75747 1445 aa22.58■■□□□ 1.21
GSE1-214ENST00000574293 PTPRUQ92729 1446 aa22.58■■□□□ 1.21
GSE1-214ENST00000574293 LRRC7Q96NW7 1537 aa22.58■■□□□ 1.21
GSE1-214ENST00000574293 RBM33Q96EV2 1170 aaKnown RBP22.57■■□□□ 1.2
GSE1-214ENST00000574293 STAC3Q96MF2 364 aa22.57■■□□□ 1.2
GSE1-214ENST00000574293 NWD1Q149M9 1564 aa22.57■■□□□ 1.2
GSE1-214ENST00000574293 NRXN1Q9ULB1 1477 aa22.56■■□□□ 1.2
GSE1-214ENST00000574293 L3MBTL2Q969R5 705 aa22.56■■□□□ 1.2
GSE1-214ENST00000574293 CFAP70Q5T0N1 1121 aa22.55■■□□□ 1.2
GSE1-214ENST00000574293 NKTRP30414 1462 aaKnown RBP22.54■■□□□ 1.2
GSE1-214ENST00000574293 IQSEC2Q5JU85 1478 aa22.54■■□□□ 1.2
GSE1-214ENST00000574293 TMEM132EQ6IEE7 984 aa22.54■■□□□ 1.2
GSE1-214ENST00000574293 C14orf93Q9H972 538 aaKnown RBP22.54■■□□□ 1.2
GSE1-214ENST00000574293 SETD1AO15047 1707 aaKnown RBP22.54■■□□□ 1.2
GSE1-214ENST00000574293 TMEM94Q12767 1356 aa22.53■■□□□ 1.2
GSE1-214ENST00000574293 CCER1Q8TC90 406 aaPredicted RBP22.5■■□□□ 1.19
GSE1-214ENST00000574293 STK26Q9P289 416 aa22.5■■□□□ 1.19
GSE1-214ENST00000574293 FBXO41Q8TF61 875 aa22.49■■□□□ 1.19
GSE1-214ENST00000574293 XRN1Q8IZH2 1706 aaKnown RBP22.48■■□□□ 1.19
GSE1-214ENST00000574293 UBAP1LF5GYI3 381 aa22.48■■□□□ 1.19
GSE1-214ENST00000574293 C14orf37Q86TY3 774 aa22.48■■□□□ 1.19
GSE1-214ENST00000574293 TONSLQ96HA7 1378 aa22.48■■□□□ 1.19
GSE1-214ENST00000574293 XIRP1Q702N8 1843 aaKnown RBP22.47■■□□□ 1.19
GSE1-214ENST00000574293 ASXL1Q8IXJ9 1541 aa22.46■■□□□ 1.19
GSE1-214ENST00000574293 LAMC1P11047 1609 aa22.46■■□□□ 1.19
GSE1-214ENST00000574293 LRPPRCP42704 1394 aaKnown RBP22.44■■□□□ 1.18
GSE1-214ENST00000574293 CLSPNQ9HAW4 1339 aa22.44■■□□□ 1.18
GSE1-214ENST00000574293 PRAG1Q86YV5 1406 aa22.43■■□□□ 1.18
GSE1-214ENST00000574293 YTHDC2Q9H6S0 1430 aaKnown RBP22.43■■□□□ 1.18
GSE1-214ENST00000574293 ROBO2Q9HCK4 1378 aa22.43■■□□□ 1.18
GSE1-214ENST00000574293 TOM1O60784 492 aa22.43■■□□□ 1.18
GSE1-214ENST00000574293 MSH6P52701 1360 aa22.42■■□□□ 1.18
GSE1-214ENST00000574293 NCOA3Q9Y6Q9 1424 aa22.41■■□□□ 1.18
GSE1-214ENST00000574293 ABCC11Q96J66 1382 aa22.41■■□□□ 1.18
GSE1-214ENST00000574293 ILDR1Q86SU0 546 aaPredicted RBP22.41■■□□□ 1.18
GSE1-214ENST00000574293 PTCH1Q13635 1447 aa22.4■■□□□ 1.18
GSE1-214ENST00000574293 SCAF1Q9H7N4 1312 aaKnown RBP22.39■■□□□ 1.18
GSE1-214ENST00000574293 PIP4K2BP78356 416 aa22.39■■□□□ 1.17
GSE1-214ENST00000574293 WAPLQ7Z5K2 1190 aa22.39■■□□□ 1.17
GSE1-214ENST00000574293 C19orf44Q9H6X5 657 aa22.39■■□□□ 1.17
GSE1-214ENST00000574293 ADGRB1O14514 1584 aa22.38■■□□□ 1.17
GSE1-214ENST00000574293 NBPF1Q3BBV0 1214 aa22.38■■□□□ 1.17
GSE1-214ENST00000574293 TRAK1Q9UPV9 953 aa22.38■■□□□ 1.17
GSE1-214ENST00000574293 TECPR2O15040 1411 aa22.38■■□□□ 1.17
GSE1-214ENST00000574293 NBPF8Q3BBV2 869 aa22.36■■□□□ 1.17
GSE1-214ENST00000574293 ATF3P18847 181 aa22.35■■□□□ 1.17
GSE1-214ENST00000574293 SIRT1Q96EB6 747 aa22.34■■□□□ 1.17
GSE1-214ENST00000574293 PLEKHH1Q9ULM0 1364 aa22.34■■□□□ 1.17
GSE1-214ENST00000574293 KNDC1Q76NI1 1749 aa22.34■■□□□ 1.17
GSE1-214ENST00000574293 KIAA1210Q9ULL0 1709 aa22.34■■□□□ 1.17
GSE1-214ENST00000574293 ADGRL3Q9HAR2 1447 aa22.33■■□□□ 1.17
GSE1-214ENST00000574293 PRAM1Q96QH2 718 aa22.33■■□□□ 1.17
GSE1-214ENST00000574293 POGKQ9P215 609 aa22.33■■□□□ 1.17
GSE1-214ENST00000574293 SIPA1L2Q9P2F8 1722 aaPredicted RBP22.32■■□□□ 1.16
GSE1-214ENST00000574293 SAFB2Q14151 953 aaKnown RBP eCLIP22.32■■□□□ 1.16
GSE1-214ENST00000574293 CADPS2Q86UW7 1296 aa22.32■■□□□ 1.16
GSE1-214ENST00000574293 FAM135BQ49AJ0 1406 aa22.31■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms