RNA–Protein interactions for RNA: ENST00000574095.1

NPLOC4-215, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 3

Gene NPLOC4, Length 277 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-215ENST00000574095 ZFYVE9O95405 1425 aa39.35■■■■□ 3.89
NPLOC4-215ENST00000574095 RIMS2Q9UQ26 1411 aa39.35■■■■□ 3.89
NPLOC4-215ENST00000574095 HDGFP51858 240 aaKnown RBP39.32■■■■□ 3.89
NPLOC4-215ENST00000574095 PPP1R15AO75807 674 aaPredicted RBP39.3■■■■□ 3.88
NPLOC4-215ENST00000574095 HFM1A2PYH4 1435 aa39.3■■■■□ 3.88
NPLOC4-215ENST00000574095 SPHKAPQ2M3C7 1700 aa39.28■■■■□ 3.88
NPLOC4-215ENST00000574095 ALKQ9UM73 1620 aa39.26■■■■□ 3.88
NPLOC4-215ENST00000574095 NUTM2DQ5VT03 806 aaPredicted RBP39.26■■■■□ 3.88
NPLOC4-215ENST00000574095 TRIM52Q96A61 297 aa39.26■■■■□ 3.88
NPLOC4-215ENST00000574095 PLEKHG1Q9ULL1 1385 aa39.25■■■■□ 3.87
NPLOC4-215ENST00000574095 KCNA6P17658 529 aa39.25■■■■□ 3.87
NPLOC4-215ENST00000574095 ABCF1Q8NE71 845 aaKnown RBP eCLIP39.24■■■■□ 3.87
NPLOC4-215ENST00000574095 XIRP1Q702N8 1843 aaKnown RBP39.24■■■■□ 3.87
NPLOC4-215ENST00000574095 HSPA1LP34931 641 aa39.17■■■■□ 3.86
NPLOC4-215ENST00000574095 PROSER2Q86WR7 435 aaPredicted RBP39.14■■■■□ 3.86
NPLOC4-215ENST00000574095 RBM33Q96EV2 1170 aaKnown RBP39.14■■■■□ 3.86
NPLOC4-215ENST00000574095 TMEM94Q12767 1356 aa39.13■■■■□ 3.85
NPLOC4-215ENST00000574095 NWD1Q149M9 1564 aa39.12■■■■□ 3.85
NPLOC4-215ENST00000574095 DISP3Q9P2K9 1392 aa39.11■■■■□ 3.85
NPLOC4-215ENST00000574095 TBX22Q9Y458 520 aa39.11■■■■□ 3.85
NPLOC4-215ENST00000574095 CLTCL1P53675 1640 aa39.11■■■■□ 3.85
NPLOC4-215ENST00000574095 ZNF326Q5BKZ1 582 aaKnown RBP39.1■■■■□ 3.85
NPLOC4-215ENST00000574095 SLC4A1APQ9BWU0 796 aaKnown RBP39.1■■■■□ 3.85
NPLOC4-215ENST00000574095 CHD2O14647 1828 aaKnown RBP39.1■■■■□ 3.85
NPLOC4-215ENST00000574095 TRPM2O94759 1503 aa39.09■■■■□ 3.85
NPLOC4-215ENST00000574095 ADAMTS13Q76LX8 1427 aa39.07■■■■□ 3.85
NPLOC4-215ENST00000574095 NKTRP30414 1462 aaKnown RBP39.06■■■■□ 3.84
NPLOC4-215ENST00000574095 KIF1BO60333 1816 aa39.02■■■■□ 3.84
NPLOC4-215ENST00000574095 DIP2AQ14689 1571 aa38.99■■■■□ 3.83
NPLOC4-215ENST00000574095 FOXD1Q16676 465 aa38.95■■■■□ 3.83
NPLOC4-215ENST00000574095 PIK3R4Q99570 1358 aa38.93■■■■□ 3.82
NPLOC4-215ENST00000574095 NEXMIFQ5QGS0 1516 aa38.92■■■■□ 3.82
NPLOC4-215ENST00000574095 NRXN3Q9Y4C0 1643 aa38.92■■■■□ 3.82
NPLOC4-215ENST00000574095 MSH6P52701 1360 aa38.9■■■■□ 3.82
NPLOC4-215ENST00000574095 SETBP1Q9Y6X0 1596 aa38.89■■■■□ 3.82
NPLOC4-215ENST00000574095 MPHOSPH9Q99550 1183 aa38.88■■■■□ 3.81
NPLOC4-215ENST00000574095 AMOTL2Q9Y2J4 779 aa38.88■■■■□ 3.81
NPLOC4-215ENST00000574095 PTPRUQ92729 1446 aa38.88■■■■□ 3.81
NPLOC4-215ENST00000574095 FAM135BQ49AJ0 1406 aa38.85■■■■□ 3.81
NPLOC4-215ENST00000574095 ILDR2Q71H61 639 aa38.84■■■■□ 3.81
NPLOC4-215ENST00000574095 SETD5Q9C0A6 1442 aa38.83■■■■□ 3.81
NPLOC4-215ENST00000574095 C14orf37Q86TY3 774 aa38.82■■■■□ 3.8
NPLOC4-215ENST00000574095 METP08581 1390 aa38.8■■■■□ 3.8
NPLOC4-215ENST00000574095 NCOA3Q9Y6Q9 1424 aa38.8■■■■□ 3.8
NPLOC4-215ENST00000574095 ROBO1Q9Y6N7 1651 aa38.79■■■■□ 3.8
NPLOC4-215ENST00000574095 SLAIN2Q9P270 581 aa38.77■■■■□ 3.8
NPLOC4-215ENST00000574095 VGFO15240 615 aaPredicted RBP38.76■■■■□ 3.8
NPLOC4-215ENST00000574095 MED1Q15648 1581 aaPredicted RBP38.76■■■■□ 3.8
NPLOC4-215ENST00000574095 RPGRIP1LQ68CZ1 1315 aa38.75■■■■□ 3.79
NPLOC4-215ENST00000574095 XRN1Q8IZH2 1706 aaKnown RBP38.74■■■■□ 3.79
NPLOC4-215ENST00000574095 CCDC144AA2RUR9 1427 aa38.72■■■■□ 3.79
NPLOC4-215ENST00000574095 SIPA1L2Q9P2F8 1722 aaPredicted RBP38.72■■■■□ 3.79
NPLOC4-215ENST00000574095 ACIN1Q9UKV3 1341 aaKnown RBP38.71■■■■□ 3.79
NPLOC4-215ENST00000574095 C19orf44Q9H6X5 657 aa38.71■■■■□ 3.79
NPLOC4-215ENST00000574095 PPLO60437 1756 aa38.71■■■■□ 3.79
NPLOC4-215ENST00000574095 RAB3GAP2Q9H2M9 1393 aa38.7■■■■□ 3.78
NPLOC4-215ENST00000574095 RGL3Q3MIN7 710 aa38.67■■■■□ 3.78
NPLOC4-215ENST00000574095 ATF3P18847 181 aa38.66■■■■□ 3.78
NPLOC4-215ENST00000574095 CADPS2Q86UW7 1296 aa38.65■■■■□ 3.78
NPLOC4-215ENST00000574095 SETD1AO15047 1707 aaKnown RBP38.63■■■■□ 3.77
NPLOC4-215ENST00000574095 SPATA31E1Q6ZUB1 1445 aa38.61■■■■□ 3.77
NPLOC4-215ENST00000574095 PHLPP1O60346 1717 aa38.56■■■■□ 3.76
NPLOC4-215ENST00000574095 ADGRF5Q8IZF2 1346 aa38.56■■■■□ 3.76
NPLOC4-215ENST00000574095 PHF23Q9BUL5 403 aaPredicted RBP38.54■■■■□ 3.76
NPLOC4-215ENST00000574095 IFT172Q9UG01 1749 aa38.52■■■■□ 3.76
NPLOC4-215ENST00000574095 DCCP43146 1447 aa38.5■■■■□ 3.75
NPLOC4-215ENST00000574095 ANKRD30BQ9BXX2 1392 aa38.49■■■■□ 3.75
NPLOC4-215ENST00000574095 ADGRL3Q9HAR2 1447 aa38.47■■■■□ 3.75
NPLOC4-215ENST00000574095 NALCNQ8IZF0 1738 aa38.47■■■■□ 3.75
NPLOC4-215ENST00000574095 ROBO2Q9HCK4 1378 aa38.46■■■■□ 3.75
NPLOC4-215ENST00000574095 PTCH1Q13635 1447 aa38.45■■■■□ 3.75
NPLOC4-215ENST00000574095 SOCS7O14512 581 aa38.44■■■■□ 3.74
NPLOC4-215ENST00000574095 BRINP3Q76B58 766 aa38.44■■■■□ 3.74
NPLOC4-215ENST00000574095 MST1RQ04912 1400 aa38.43■■■■□ 3.74
NPLOC4-215ENST00000574095 COL16A1Q07092 1604 aaPredicted RBP38.42■■■■□ 3.74
NPLOC4-215ENST00000574095 HRCP23327 699 aa38.4■■■■□ 3.74
NPLOC4-215ENST00000574095 PRAG1Q86YV5 1406 aa38.38■■■■□ 3.74
NPLOC4-215ENST00000574095 AHDC1Q5TGY3 1603 aaPredicted RBP38.38■■■■□ 3.74
NPLOC4-215ENST00000574095 JCADQ9P266 1359 aa38.38■■■■□ 3.73
NPLOC4-215ENST00000574095 PIK3C2GO75747 1445 aa38.36■■■■□ 3.73
NPLOC4-215ENST00000574095 TMEM132EQ6IEE7 984 aa38.35■■■■□ 3.73
NPLOC4-215ENST00000574095 STK26Q9P289 416 aa38.35■■■■□ 3.73
NPLOC4-215ENST00000574095 ASXL1Q8IXJ9 1541 aa38.33■■■■□ 3.73
NPLOC4-215ENST00000574095 RGS17Q9UGC6 210 aaPredicted RBP38.32■■■■□ 3.72
NPLOC4-215ENST00000574095 LRPPRCP42704 1394 aaKnown RBP38.28■■■■□ 3.72
NPLOC4-215ENST00000574095 C1orf167Q5SNV9 1468 aa38.26■■■■□ 3.72
NPLOC4-215ENST00000574095 MYOM2P54296 1465 aa38.25■■■■□ 3.71
NPLOC4-215ENST00000574095 NHSL1Q5SYE7 1610 aa38.25■■■■□ 3.71
NPLOC4-215ENST00000574095 WAPLQ7Z5K2 1190 aa38.25■■■■□ 3.71
NPLOC4-215ENST00000574095 C14orf93Q9H972 538 aaKnown RBP38.25■■■■□ 3.71
NPLOC4-215ENST00000574095 NRXN1Q9ULB1 1477 aa38.24■■■■□ 3.71
NPLOC4-215ENST00000574095 DDX17Q92841 729 aaKnown RBP38.24■■■■□ 3.71
NPLOC4-215ENST00000574095 TECPR2O15040 1411 aa38.23■■■■□ 3.71
NPLOC4-215ENST00000574095 CFAP70Q5T0N1 1121 aa38.23■■■■□ 3.71
NPLOC4-215ENST00000574095 ABCC11Q96J66 1382 aa38.22■■■■□ 3.71
NPLOC4-215ENST00000574095 YTHDC2Q9H6S0 1430 aaKnown RBP38.21■■■■□ 3.71
NPLOC4-215ENST00000574095 SHPRHQ149N8 1683 aa38.2■■■■□ 3.71
NPLOC4-215ENST00000574095 KNDC1Q76NI1 1749 aa38.2■■■■□ 3.71
NPLOC4-215ENST00000574095 SPATA31A6Q5VVP1 1343 aa38.19■■■■□ 3.7
NPLOC4-215ENST00000574095 ORAI2Q96SN7 254 aa38.19■■■■□ 3.7
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms