RNA–Protein interactions for RNA: ENST00000574070.5

CLDN7-207, Transcript of claudin 7, humanhuman

TSL 1 (best)

Gene CLDN7, Length 485 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN7-207ENST00000574070 NPHP4O75161 1426 aaPredicted RBP25.52■■□□□ 1.68
CLDN7-207ENST00000574070 ARHGAP23Q9P227 1491 aa25.52■■□□□ 1.68
CLDN7-207ENST00000574070 HRCP23327 699 aa25.51■■□□□ 1.67
CLDN7-207ENST00000574070 LTKP29376 864 aa25.51■■□□□ 1.67
CLDN7-207ENST00000574070 TRIM26Q12899 539 aaPredicted RBP25.51■■□□□ 1.67
CLDN7-207ENST00000574070 SCAF11Q99590 1463 aaKnown RBP25.51■■□□□ 1.67
CLDN7-207ENST00000574070 TRPM2O94759 1503 aa25.51■■□□□ 1.67
CLDN7-207ENST00000574070 NEURL4Q96JN8 1562 aa25.51■■□□□ 1.67
CLDN7-207ENST00000574070 TMEM131LA2VDJ0 1609 aa25.49■■□□□ 1.67
CLDN7-207ENST00000574070 HDGFP51858 240 aaKnown RBP25.49■■□□□ 1.67
CLDN7-207ENST00000574070 PPP1R15AO75807 674 aaPredicted RBP25.48■■□□□ 1.67
CLDN7-207ENST00000574070 ZNF326Q5BKZ1 582 aaKnown RBP25.48■■□□□ 1.67
CLDN7-207ENST00000574070 MYO5BQ9ULV0 1848 aa25.48■■□□□ 1.67
CLDN7-207ENST00000574070 BCANQ96GW7 911 aa25.47■■□□□ 1.67
CLDN7-207ENST00000574070 CLTCL1P53675 1640 aa25.47■■□□□ 1.67
CLDN7-207ENST00000574070 MED14O60244 1454 aa25.47■■□□□ 1.67
CLDN7-207ENST00000574070 PHF23Q9BUL5 403 aaPredicted RBP25.46■■□□□ 1.67
CLDN7-207ENST00000574070 RIMS2Q9UQ26 1411 aa25.46■■□□□ 1.67
CLDN7-207ENST00000574070 IQGAP1P46940 1657 aa25.45■■□□□ 1.66
CLDN7-207ENST00000574070 NUTM2DQ5VT03 806 aaPredicted RBP25.43■■□□□ 1.66
CLDN7-207ENST00000574070 ABCF1Q8NE71 845 aaKnown RBP eCLIP25.43■■□□□ 1.66
CLDN7-207ENST00000574070 SENP3Q9H4L4 574 aaPredicted RBP25.43■■□□□ 1.66
CLDN7-207ENST00000574070 CCDC144AA2RUR9 1427 aa25.42■■□□□ 1.66
CLDN7-207ENST00000574070 KIF1BO60333 1816 aa25.41■■□□□ 1.66
CLDN7-207ENST00000574070 ZFYVE9O95405 1425 aa25.39■■□□□ 1.66
CLDN7-207ENST00000574070 SLC26A8Q96RN1 970 aa25.34■■□□□ 1.65
CLDN7-207ENST00000574070 PLEKHG1Q9ULL1 1385 aa25.33■■□□□ 1.65
CLDN7-207ENST00000574070 RGL3Q3MIN7 710 aa25.31■■□□□ 1.64
CLDN7-207ENST00000574070 ALKQ9UM73 1620 aa25.29■■□□□ 1.64
CLDN7-207ENST00000574070 RPGRIP1LQ68CZ1 1315 aa25.27■■□□□ 1.64
CLDN7-207ENST00000574070 ANKRD30BQ9BXX2 1392 aa25.27■■□□□ 1.64
CLDN7-207ENST00000574070 NEXMIFQ5QGS0 1516 aa25.27■■□□□ 1.64
CLDN7-207ENST00000574070 VGFO15240 615 aaPredicted RBP25.24■■□□□ 1.63
CLDN7-207ENST00000574070 STRCP1A6NGW2 1772 aa25.23■■□□□ 1.63
CLDN7-207ENST00000574070 LRRC7Q96NW7 1537 aa25.23■■□□□ 1.63
CLDN7-207ENST00000574070 SPATA31E1Q6ZUB1 1445 aa25.22■■□□□ 1.63
CLDN7-207ENST00000574070 TBX22Q9Y458 520 aa25.22■■□□□ 1.63
CLDN7-207ENST00000574070 ADAMTS13Q76LX8 1427 aa25.2■■□□□ 1.62
CLDN7-207ENST00000574070 KCNA6P17658 529 aa25.19■■□□□ 1.62
CLDN7-207ENST00000574070 PCGF6Q9BYE7 350 aa25.17■■□□□ 1.62
CLDN7-207ENST00000574070 PPLO60437 1756 aa25.17■■□□□ 1.62
CLDN7-207ENST00000574070 DIP2AQ14689 1571 aa25.17■■□□□ 1.62
CLDN7-207ENST00000574070 SETBP1Q9Y6X0 1596 aa25.15■■□□□ 1.62
CLDN7-207ENST00000574070 ADGRF5Q8IZF2 1346 aa25.12■■□□□ 1.61
CLDN7-207ENST00000574070 NRXN3Q9Y4C0 1643 aa25.12■■□□□ 1.61
CLDN7-207ENST00000574070 PROSER2Q86WR7 435 aaPredicted RBP25.12■■□□□ 1.61
CLDN7-207ENST00000574070 DHX57Q6P158 1386 aaKnown RBP25.11■■□□□ 1.61
CLDN7-207ENST00000574070 PIK3R4Q99570 1358 aa25.11■■□□□ 1.61
CLDN7-207ENST00000574070 NWD1Q149M9 1564 aa25.09■■□□□ 1.61
CLDN7-207ENST00000574070 IFT172Q9UG01 1749 aa25.09■■□□□ 1.61
CLDN7-207ENST00000574070 CHD2O14647 1828 aaKnown RBP25.08■■□□□ 1.61
CLDN7-207ENST00000574070 AMOTL2Q9Y2J4 779 aa25.08■■□□□ 1.61
CLDN7-207ENST00000574070 KDM2AQ9Y2K7 1162 aa25.08■■□□□ 1.61
CLDN7-207ENST00000574070 METP08581 1390 aa25.07■■□□□ 1.6
CLDN7-207ENST00000574070 RBM33Q96EV2 1170 aaKnown RBP25.07■■□□□ 1.6
CLDN7-207ENST00000574070 NKTRP30414 1462 aaKnown RBP25.07■■□□□ 1.6
CLDN7-207ENST00000574070 DCAF11Q8TEB1 546 aa25.06■■□□□ 1.6
CLDN7-207ENST00000574070 TMEM94Q12767 1356 aa25.05■■□□□ 1.6
CLDN7-207ENST00000574070 XIRP1Q702N8 1843 aaKnown RBP25.05■■□□□ 1.6
CLDN7-207ENST00000574070 NEUROD1Q13562 356 aa25.04■■□□□ 1.6
CLDN7-207ENST00000574070 PTPRUQ92729 1446 aa25.03■■□□□ 1.6
CLDN7-207ENST00000574070 C14orf37Q86TY3 774 aa25.03■■□□□ 1.6
CLDN7-207ENST00000574070 SIN3AQ96ST3 1273 aa25.03■■□□□ 1.6
CLDN7-207ENST00000574070 RGS17Q9UGC6 210 aaPredicted RBP25.03■■□□□ 1.6
CLDN7-207ENST00000574070 MYOM2P54296 1465 aa25.02■■□□□ 1.6
CLDN7-207ENST00000574070 PIK3C2GO75747 1445 aa25.01■■□□□ 1.59
CLDN7-207ENST00000574070 FAM135BQ49AJ0 1406 aa24.99■■□□□ 1.59
CLDN7-207ENST00000574070 SETD1AO15047 1707 aaKnown RBP24.98■■□□□ 1.59
CLDN7-207ENST00000574070 STAC3Q96MF2 364 aa24.97■■□□□ 1.59
CLDN7-207ENST00000574070 CFAP70Q5T0N1 1121 aa24.96■■□□□ 1.59
CLDN7-207ENST00000574070 NRXN1Q9ULB1 1477 aa24.96■■□□□ 1.59
CLDN7-207ENST00000574070 XRN1Q8IZH2 1706 aaKnown RBP24.95■■□□□ 1.59
CLDN7-207ENST00000574070 MSH6P52701 1360 aa24.95■■□□□ 1.59
CLDN7-207ENST00000574070 TMEM132EQ6IEE7 984 aa24.95■■□□□ 1.58
CLDN7-207ENST00000574070 C14orf93Q9H972 538 aaKnown RBP24.95■■□□□ 1.58
CLDN7-207ENST00000574070 STK26Q9P289 416 aa24.95■■□□□ 1.58
CLDN7-207ENST00000574070 NCOA3Q9Y6Q9 1424 aa24.91■■□□□ 1.58
CLDN7-207ENST00000574070 ROBO1Q9Y6N7 1651 aa24.91■■□□□ 1.58
CLDN7-207ENST00000574070 LAMC1P11047 1609 aa24.9■■□□□ 1.58
CLDN7-207ENST00000574070 POTEAQ6S8J7 498 aa24.89■■□□□ 1.58
CLDN7-207ENST00000574070 L3MBTL2Q969R5 705 aa24.89■■□□□ 1.58
CLDN7-207ENST00000574070 LRPPRCP42704 1394 aaKnown RBP24.88■■□□□ 1.57
CLDN7-207ENST00000574070 PTCH1Q13635 1447 aa24.87■■□□□ 1.57
CLDN7-207ENST00000574070 ASXL1Q8IXJ9 1541 aa24.87■■□□□ 1.57
CLDN7-207ENST00000574070 ATF3P18847 181 aa24.87■■□□□ 1.57
CLDN7-207ENST00000574070 C19orf44Q9H6X5 657 aa24.87■■□□□ 1.57
CLDN7-207ENST00000574070 ROBO2Q9HCK4 1378 aa24.87■■□□□ 1.57
CLDN7-207ENST00000574070 YTHDC2Q9H6S0 1430 aaKnown RBP24.86■■□□□ 1.57
CLDN7-207ENST00000574070 TONSLQ96HA7 1378 aa24.83■■□□□ 1.57
CLDN7-207ENST00000574070 CADPS2Q86UW7 1296 aa24.83■■□□□ 1.57
CLDN7-207ENST00000574070 ABCC11Q96J66 1382 aa24.82■■□□□ 1.56
CLDN7-207ENST00000574070 PRAG1Q86YV5 1406 aa24.81■■□□□ 1.56
CLDN7-207ENST00000574070 SIPA1L2Q9P2F8 1722 aaPredicted RBP24.81■■□□□ 1.56
CLDN7-207ENST00000574070 WAPLQ7Z5K2 1190 aa24.8■■□□□ 1.56
CLDN7-207ENST00000574070 PHLPP1O60346 1717 aa24.8■■□□□ 1.56
CLDN7-207ENST00000574070 TECPR2O15040 1411 aa24.79■■□□□ 1.56
CLDN7-207ENST00000574070 ADGRL3Q9HAR2 1447 aa24.79■■□□□ 1.56
CLDN7-207ENST00000574070 TRAK1Q9UPV9 953 aa24.79■■□□□ 1.56
CLDN7-207ENST00000574070 KNDC1Q76NI1 1749 aa24.78■■□□□ 1.56
CLDN7-207ENST00000574070 SLAIN2Q9P270 581 aa24.78■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms