RNA–Protein interactions for RNA: ENST00000573989.1

TRAPPC1-206, Transcript of trafficking protein particle complex 1, humanhuman

TSL 2

Gene TRAPPC1, Length 436 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1-206ENST00000573989 NPHP4O75161 1426 aaPredicted RBP18.73■□□□□ 0.59
TRAPPC1-206ENST00000573989 PPP1R15AO75807 674 aaPredicted RBP18.72■□□□□ 0.59
TRAPPC1-206ENST00000573989 RIMS2Q9UQ26 1411 aa18.72■□□□□ 0.59
TRAPPC1-206ENST00000573989 LTKP29376 864 aa18.71■□□□□ 0.59
TRAPPC1-206ENST00000573989 ZFYVE9O95405 1425 aa18.7■□□□□ 0.58
TRAPPC1-206ENST00000573989 BCANQ96GW7 911 aa18.68■□□□□ 0.58
TRAPPC1-206ENST00000573989 ANKRD30BQ9BXX2 1392 aa18.68■□□□□ 0.58
TRAPPC1-206ENST00000573989 RPGRIP1LQ68CZ1 1315 aa18.67■□□□□ 0.58
TRAPPC1-206ENST00000573989 PCGF6Q9BYE7 350 aa18.66■□□□□ 0.58
TRAPPC1-206ENST00000573989 PLEKHG1Q9ULL1 1385 aa18.65■□□□□ 0.58
TRAPPC1-206ENST00000573989 VGFO15240 615 aaPredicted RBP18.63■□□□□ 0.57
TRAPPC1-206ENST00000573989 NUTM2DQ5VT03 806 aaPredicted RBP18.63■□□□□ 0.57
TRAPPC1-206ENST00000573989 NEXMIFQ5QGS0 1516 aa18.63■□□□□ 0.57
TRAPPC1-206ENST00000573989 RGL3Q3MIN7 710 aa18.62■□□□□ 0.57
TRAPPC1-206ENST00000573989 PPLO60437 1756 aa18.62■□□□□ 0.57
TRAPPC1-206ENST00000573989 SPATA31E1Q6ZUB1 1445 aa18.61■□□□□ 0.57
TRAPPC1-206ENST00000573989 DIP2AQ14689 1571 aa18.59■□□□□ 0.57
TRAPPC1-206ENST00000573989 ZNF335Q9H4Z2 1342 aaPredicted RBP18.58■□□□□ 0.57
TRAPPC1-206ENST00000573989 SLC26A8Q96RN1 970 aa18.58■□□□□ 0.56
TRAPPC1-206ENST00000573989 IFT172Q9UG01 1749 aa18.57■□□□□ 0.56
TRAPPC1-206ENST00000573989 DHX57Q6P158 1386 aaKnown RBP18.57■□□□□ 0.56
TRAPPC1-206ENST00000573989 CPS1P31327 1500 aa18.56■□□□□ 0.56
TRAPPC1-206ENST00000573989 TBX22Q9Y458 520 aa18.56■□□□□ 0.56
TRAPPC1-206ENST00000573989 SETBP1Q9Y6X0 1596 aa18.55■□□□□ 0.56
TRAPPC1-206ENST00000573989 SENP3Q9H4L4 574 aaPredicted RBP18.55■□□□□ 0.56
TRAPPC1-206ENST00000573989 LTBP4Q8N2S1 1624 aa18.55■□□□□ 0.56
TRAPPC1-206ENST00000573989 CERKQ8TCT0 537 aa18.53■□□□□ 0.56
TRAPPC1-206ENST00000573989 STAC3Q96MF2 364 aa18.53■□□□□ 0.56
TRAPPC1-206ENST00000573989 ADAMTS13Q76LX8 1427 aa18.52■□□□□ 0.56
TRAPPC1-206ENST00000573989 CHD2O14647 1828 aaKnown RBP18.52■□□□□ 0.56
TRAPPC1-206ENST00000573989 PIK3R4Q99570 1358 aa18.52■□□□□ 0.55
TRAPPC1-206ENST00000573989 NRXN3Q9Y4C0 1643 aa18.52■□□□□ 0.55
TRAPPC1-206ENST00000573989 KCNA6P17658 529 aa18.51■□□□□ 0.55
TRAPPC1-206ENST00000573989 IQSEC2Q5JU85 1478 aa18.5■□□□□ 0.55
TRAPPC1-206ENST00000573989 STRCP1A6NGW2 1772 aa18.5■□□□□ 0.55
TRAPPC1-206ENST00000573989 MYOM2P54296 1465 aa18.49■□□□□ 0.55
TRAPPC1-206ENST00000573989 DCAF11Q8TEB1 546 aa18.48■□□□□ 0.55
TRAPPC1-206ENST00000573989 ADGRF5Q8IZF2 1346 aa18.48■□□□□ 0.55
TRAPPC1-206ENST00000573989 NWD1Q149M9 1564 aa18.47■□□□□ 0.55
TRAPPC1-206ENST00000573989 NKTRP30414 1462 aaKnown RBP18.46■□□□□ 0.55
TRAPPC1-206ENST00000573989 ALKQ9UM73 1620 aa18.46■□□□□ 0.55
TRAPPC1-206ENST00000573989 NEUROD1Q13562 356 aa18.46■□□□□ 0.55
TRAPPC1-206ENST00000573989 SIN3AQ96ST3 1273 aa18.45■□□□□ 0.54
TRAPPC1-206ENST00000573989 KDM2AQ9Y2K7 1162 aa18.45■□□□□ 0.54
TRAPPC1-206ENST00000573989 PIK3C2GO75747 1445 aa18.45■□□□□ 0.54
TRAPPC1-206ENST00000573989 LAMC1P11047 1609 aa18.45■□□□□ 0.54
TRAPPC1-206ENST00000573989 SETD1AO15047 1707 aaKnown RBP18.44■□□□□ 0.54
TRAPPC1-206ENST00000573989 NRXN1Q9ULB1 1477 aa18.44■□□□□ 0.54
TRAPPC1-206ENST00000573989 PROSER2Q86WR7 435 aaPredicted RBP18.43■□□□□ 0.54
TRAPPC1-206ENST00000573989 AMOTL2Q9Y2J4 779 aa18.43■□□□□ 0.54
TRAPPC1-206ENST00000573989 LRRC7Q96NW7 1537 aa18.43■□□□□ 0.54
TRAPPC1-206ENST00000573989 METP08581 1390 aa18.42■□□□□ 0.54
TRAPPC1-206ENST00000573989 CLSPNQ9HAW4 1339 aa18.41■□□□□ 0.54
TRAPPC1-206ENST00000573989 C14orf93Q9H972 538 aaKnown RBP18.4■□□□□ 0.54
TRAPPC1-206ENST00000573989 XRN1Q8IZH2 1706 aaKnown RBP18.4■□□□□ 0.54
TRAPPC1-206ENST00000573989 PTPRUQ92729 1446 aa18.39■□□□□ 0.53
TRAPPC1-206ENST00000573989 XIRP1Q702N8 1843 aaKnown RBP18.38■□□□□ 0.53
TRAPPC1-206ENST00000573989 TMEM94Q12767 1356 aa18.38■□□□□ 0.53
TRAPPC1-206ENST00000573989 TONSLQ96HA7 1378 aa18.38■□□□□ 0.53
TRAPPC1-206ENST00000573989 FBXO41Q8TF61 875 aa18.37■□□□□ 0.53
TRAPPC1-206ENST00000573989 L3MBTL2Q969R5 705 aa18.37■□□□□ 0.53
TRAPPC1-206ENST00000573989 NCOA3Q9Y6Q9 1424 aa18.37■□□□□ 0.53
TRAPPC1-206ENST00000573989 CFAP70Q5T0N1 1121 aa18.36■□□□□ 0.53
TRAPPC1-206ENST00000573989 CCER1Q8TC90 406 aaPredicted RBP18.36■□□□□ 0.53
TRAPPC1-206ENST00000573989 TOM1O60784 492 aa18.35■□□□□ 0.53
TRAPPC1-206ENST00000573989 C14orf37Q86TY3 774 aa18.35■□□□□ 0.53
TRAPPC1-206ENST00000573989 PTCH1Q13635 1447 aa18.34■□□□□ 0.53
TRAPPC1-206ENST00000573989 MSH6P52701 1360 aa18.34■□□□□ 0.53
TRAPPC1-206ENST00000573989 UBAP1LF5GYI3 381 aa18.34■□□□□ 0.53
TRAPPC1-206ENST00000573989 KIAA1210Q9ULL0 1709 aa18.34■□□□□ 0.53
TRAPPC1-206ENST00000573989 PRAG1Q86YV5 1406 aa18.33■□□□□ 0.53
TRAPPC1-206ENST00000573989 LRPPRCP42704 1394 aaKnown RBP18.33■□□□□ 0.53
TRAPPC1-206ENST00000573989 KNDC1Q76NI1 1749 aa18.33■□□□□ 0.52
TRAPPC1-206ENST00000573989 TMEM132EQ6IEE7 984 aa18.33■□□□□ 0.52
TRAPPC1-206ENST00000573989 YTHDC2Q9H6S0 1430 aaKnown RBP18.32■□□□□ 0.52
TRAPPC1-206ENST00000573989 ABCC11Q96J66 1382 aa18.31■□□□□ 0.52
TRAPPC1-206ENST00000573989 STK26Q9P289 416 aa18.31■□□□□ 0.52
TRAPPC1-206ENST00000573989 ASXL1Q8IXJ9 1541 aa18.31■□□□□ 0.52
TRAPPC1-206ENST00000573989 RBM33Q96EV2 1170 aaKnown RBP18.3■□□□□ 0.52
TRAPPC1-206ENST00000573989 TECPR2O15040 1411 aa18.3■□□□□ 0.52
TRAPPC1-206ENST00000573989 C19orf44Q9H6X5 657 aa18.29■□□□□ 0.52
TRAPPC1-206ENST00000573989 TIMELESSQ9UNS1 1208 aa18.28■□□□□ 0.52
TRAPPC1-206ENST00000573989 ROBO2Q9HCK4 1378 aa18.28■□□□□ 0.52
TRAPPC1-206ENST00000573989 ADGRB1O14514 1584 aa18.27■□□□□ 0.52
TRAPPC1-206ENST00000573989 ATF3P18847 181 aa18.27■□□□□ 0.52
TRAPPC1-206ENST00000573989 SIRT1Q96EB6 747 aa18.27■□□□□ 0.52
TRAPPC1-206ENST00000573989 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.26■□□□□ 0.51
TRAPPC1-206ENST00000573989 CADPS2Q86UW7 1296 aa18.26■□□□□ 0.51
TRAPPC1-206ENST00000573989 SCAF1Q9H7N4 1312 aaKnown RBP18.25■□□□□ 0.51
TRAPPC1-206ENST00000573989 DCCP43146 1447 aa18.25■□□□□ 0.51
TRAPPC1-206ENST00000573989 FAM135BQ49AJ0 1406 aa18.25■□□□□ 0.51
TRAPPC1-206ENST00000573989 ADGRL3Q9HAR2 1447 aa18.25■□□□□ 0.51
TRAPPC1-206ENST00000573989 DLC1Q96QB1 1528 aa18.25■□□□□ 0.51
TRAPPC1-206ENST00000573989 TRPM1Q7Z4N2 1603 aa18.24■□□□□ 0.51
TRAPPC1-206ENST00000573989 NALCNQ8IZF0 1738 aa18.24■□□□□ 0.51
TRAPPC1-206ENST00000573989 PIP4K2BP78356 416 aa18.23■□□□□ 0.51
TRAPPC1-206ENST00000573989 POGKQ9P215 609 aa18.23■□□□□ 0.51
TRAPPC1-206ENST00000573989 TRAK1Q9UPV9 953 aa18.23■□□□□ 0.51
TRAPPC1-206ENST00000573989 ILDR1Q86SU0 546 aaPredicted RBP18.22■□□□□ 0.51
TRAPPC1-206ENST00000573989 ROCK2O75116 1388 aaKnown RBP18.21■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 81.6 ms