RNA–Protein interactions for RNA: ENST00000573795.5

SNF8-216, Transcript of SNF8, ESCRT-II complex subunit, human

TSL 5

Gene SNF8, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SNF8-216	ENST00000573795	TMEM131L	A2VDJ0	1609 aa		34.03	■■■■□ 3.04
SNF8-216	ENST00000573795		E9PCH4	1651 aa		34	■■■■□ 3.03
SNF8-216	ENST00000573795	NKTR	P30414	1462 aa	Known RBP	33.98	■■■■□ 3.03
SNF8-216	ENST00000573795	ROCK1	Q13464	1354 aa		33.98	■■■■□ 3.03
SNF8-216	ENST00000573795	IQGAP3	Q86VI3	1631 aa		33.97	■■■■□ 3.03
SNF8-216	ENST00000573795	FAM135B	Q49AJ0	1406 aa		33.96	■■■■□ 3.03
SNF8-216	ENST00000573795	PLEKHG1	Q9ULL1	1385 aa		33.94	■■■■□ 3.02
SNF8-216	ENST00000573795	RIMS2	Q9UQ26	1411 aa		33.94	■■■■□ 3.02
SNF8-216	ENST00000573795	RBM33	Q96EV2	1170 aa	Known RBP	33.93	■■■■□ 3.02
SNF8-216	ENST00000573795	CHD2	O14647	1828 aa	Known RBP	33.93	■■■■□ 3.02
SNF8-216	ENST00000573795	ROBO1	Q9Y6N7	1651 aa		33.91	■■■■□ 3.02
SNF8-216	ENST00000573795	PROSER2	Q86WR7	435 aa	Predicted RBP	33.91	■■■■□ 3.02
SNF8-216	ENST00000573795	PHF23	Q9BUL5	403 aa	Predicted RBP	33.9	■■■■□ 3.02
SNF8-216	ENST00000573795	BCAN	Q96GW7	911 aa		33.85	■■■■□ 3.01
SNF8-216	ENST00000573795	PPP1R15A	O75807	674 aa	Predicted RBP	33.81	■■■■□ 3
SNF8-216	ENST00000573795	ADAMTS13	Q76LX8	1427 aa		33.8	■■■■□ 3
SNF8-216	ENST00000573795	NUP155	O75694	1391 aa		33.79	■■■■□ 3
SNF8-216	ENST00000573795	MSH6	P52701	1360 aa		33.78	■■■■□ 3
SNF8-216	ENST00000573795	RGS17	Q9UGC6	210 aa	Predicted RBP	33.78	■■■■□ 3
SNF8-216	ENST00000573795	CHGA	P10645	457 aa	Known RBP	33.77	■■■■□ 3
SNF8-216	ENST00000573795	HDGF	P51858	240 aa	Known RBP	33.77	■■■■□ 3
SNF8-216	ENST00000573795	TBX22	Q9Y458	520 aa		33.77	■■■■□ 3
SNF8-216	ENST00000573795	DIP2A	Q14689	1571 aa		33.77	■■■■□ 3
SNF8-216	ENST00000573795	ITGAE	P38570	1179 aa		33.76	■■■□□ 2.99
SNF8-216	ENST00000573795	PPARGC1B	Q86YN6	1023 aa	Known RBP	33.76	■■■□□ 2.99
SNF8-216	ENST00000573795	ABCF1	Q8NE71	845 aa	Known RBP eCLIP	33.75	■■■□□ 2.99
SNF8-216	ENST00000573795	NUTM2D	Q5VT03	806 aa	Predicted RBP	33.74	■■■□□ 2.99
SNF8-216	ENST00000573795	SPHKAP	Q2M3C7	1700 aa		33.7	■■■□□ 2.99
SNF8-216	ENST00000573795	SLAIN2	Q9P270	581 aa		33.69	■■■□□ 2.98
SNF8-216	ENST00000573795	PHLPP1	O60346	1717 aa		33.69	■■■□□ 2.98
SNF8-216	ENST00000573795	NCOA3	Q9Y6Q9	1424 aa		33.69	■■■□□ 2.98
SNF8-216	ENST00000573795	PIK3R4	Q99570	1358 aa		33.67	■■■□□ 2.98
SNF8-216	ENST00000573795	NRXN3	Q9Y4C0	1643 aa		33.66	■■■□□ 2.98
SNF8-216	ENST00000573795	SIPA1L2	Q9P2F8	1722 aa	Predicted RBP	33.65	■■■□□ 2.98
SNF8-216	ENST00000573795	TRPM2	O94759	1503 aa		33.64	■■■□□ 2.98
SNF8-216	ENST00000573795	PTPRU	Q92729	1446 aa		33.63	■■■□□ 2.97
SNF8-216	ENST00000573795	COL16A1	Q07092	1604 aa	Predicted RBP	33.63	■■■□□ 2.97
SNF8-216	ENST00000573795	RRBP1	Q9P2E9	1410 aa	Known RBP	33.59	■■■□□ 2.97
SNF8-216	ENST00000573795	SETBP1	Q9Y6X0	1596 aa		33.59	■■■□□ 2.97
SNF8-216	ENST00000573795	XRN1	Q8IZH2	1706 aa	Known RBP	33.58	■■■□□ 2.97
SNF8-216	ENST00000573795	CLTCL1	P53675	1640 aa		33.56	■■■□□ 2.96
SNF8-216	ENST00000573795	POTEA	Q6S8J7	498 aa		33.55	■■■□□ 2.96
SNF8-216	ENST00000573795	JCAD	Q9P266	1359 aa		33.54	■■■□□ 2.96
SNF8-216	ENST00000573795	AMOTL2	Q9Y2J4	779 aa		33.53	■■■□□ 2.96
SNF8-216	ENST00000573795	NAIP	Q13075	1403 aa		33.53	■■■□□ 2.96
SNF8-216	ENST00000573795	C14orf37	Q86TY3	774 aa		33.52	■■■□□ 2.96
SNF8-216	ENST00000573795	C19orf44	Q9H6X5	657 aa		33.52	■■■□□ 2.96
SNF8-216	ENST00000573795	AHDC1	Q5TGY3	1603 aa	Predicted RBP	33.52	■■■□□ 2.96
SNF8-216	ENST00000573795	NEXMIF	Q5QGS0	1516 aa		33.5	■■■□□ 2.95
SNF8-216	ENST00000573795	CADPS2	Q86UW7	1296 aa		33.49	■■■□□ 2.95
SNF8-216	ENST00000573795	LRP6	O75581	1613 aa		33.46	■■■□□ 2.95
SNF8-216	ENST00000573795	MET	P08581	1390 aa		33.46	■■■□□ 2.95
SNF8-216	ENST00000573795	ATF3	P18847	181 aa		33.45	■■■□□ 2.95
SNF8-216	ENST00000573795	ZNF326	Q5BKZ1	582 aa	Known RBP	33.44	■■■□□ 2.94
SNF8-216	ENST00000573795	DCC	P43146	1447 aa		33.44	■■■□□ 2.94
SNF8-216	ENST00000573795	SHPRH	Q149N8	1683 aa		33.43	■■■□□ 2.94
SNF8-216	ENST00000573795	KIF1B	O60333	1816 aa		33.43	■■■□□ 2.94
SNF8-216	ENST00000573795	BRINP3	Q76B58	766 aa		33.39	■■■□□ 2.94
SNF8-216	ENST00000573795	MST1R	Q04912	1400 aa		33.36	■■■□□ 2.93
SNF8-216	ENST00000573795	ASXL1	Q8IXJ9	1541 aa		33.36	■■■□□ 2.93
SNF8-216	ENST00000573795	SETD1A	O15047	1707 aa	Known RBP	33.36	■■■□□ 2.93
SNF8-216	ENST00000573795	HFM1	A2PYH4	1435 aa		33.36	■■■□□ 2.93
SNF8-216	ENST00000573795	SPATA31A6	Q5VVP1	1343 aa		33.35	■■■□□ 2.93
SNF8-216	ENST00000573795	NALCN	Q8IZF0	1738 aa		33.35	■■■□□ 2.93
SNF8-216	ENST00000573795	NHSL1	Q5SYE7	1610 aa		33.34	■■■□□ 2.93
SNF8-216	ENST00000573795	ADGRL3	Q9HAR2	1447 aa		33.32	■■■□□ 2.92
SNF8-216	ENST00000573795	SETD5	Q9C0A6	1442 aa		33.25	■■■□□ 2.91
SNF8-216	ENST00000573795	TRIM52	Q96A61	297 aa		33.24	■■■□□ 2.91
SNF8-216	ENST00000573795	PPL	O60437	1756 aa		33.24	■■■□□ 2.91
SNF8-216	ENST00000573795	PTCH1	Q13635	1447 aa		33.22	■■■□□ 2.91
SNF8-216	ENST00000573795	MEX3C	Q5U5Q3	659 aa	Known RBP	33.21	■■■□□ 2.91
SNF8-216	ENST00000573795	PRAG1	Q86YV5	1406 aa		33.19	■■■□□ 2.9
SNF8-216	ENST00000573795	SLC4A1AP	Q9BWU0	796 aa	Known RBP	33.19	■■■□□ 2.9
SNF8-216	ENST00000573795	ROBO2	Q9HCK4	1378 aa		33.18	■■■□□ 2.9
SNF8-216	ENST00000573795	VGF	O15240	615 aa	Predicted RBP	33.17	■■■□□ 2.9
SNF8-216	ENST00000573795	DDX17	Q92841	729 aa	Known RBP	33.16	■■■□□ 2.9
SNF8-216	ENST00000573795	LAMC1	P11047	1609 aa		33.15	■■■□□ 2.9
SNF8-216	ENST00000573795	C1orf167	Q5SNV9	1468 aa		33.15	■■■□□ 2.9
SNF8-216	ENST00000573795	RPGRIP1L	Q68CZ1	1315 aa		33.15	■■■□□ 2.9
SNF8-216	ENST00000573795	ZNF772	Q68DY9	489 aa	Predicted RBP	33.15	■■■□□ 2.9
SNF8-216	ENST00000573795	NUTM2B	A6NNL0	878 aa	Predicted RBP	33.13	■■■□□ 2.89
SNF8-216	ENST00000573795	NUTM2E	B1AL46	878 aa	Predicted RBP	33.13	■■■□□ 2.89
SNF8-216	ENST00000573795	NUTM2A	Q8IVF1	878 aa	Predicted RBP	33.13	■■■□□ 2.89
SNF8-216	ENST00000573795	PNPLA6	Q8IY17	1366 aa		33.1	■■■□□ 2.89
SNF8-216	ENST00000573795	FOXD1	Q16676	465 aa		33.1	■■■□□ 2.89
SNF8-216	ENST00000573795	LRRC59	Q96AG4	307 aa	Known RBP	33.09	■■■□□ 2.89
SNF8-216	ENST00000573795	IFT172	Q9UG01	1749 aa		33.05	■■■□□ 2.88
SNF8-216	ENST00000573795	AFF2	P51816	1311 aa		33.03	■■■□□ 2.88
SNF8-216	ENST00000573795	SPATA31E1	Q6ZUB1	1445 aa		33.02	■■■□□ 2.88
SNF8-216	ENST00000573795	ORAI2	Q96SN7	254 aa		33.02	■■■□□ 2.88
SNF8-216	ENST00000573795	ADGRF5	Q8IZF2	1346 aa		33.01	■■■□□ 2.87
SNF8-216	ENST00000573795	CDK12	Q9NYV4	1490 aa	Predicted RBP	33	■■■□□ 2.87
SNF8-216	ENST00000573795	CCDC144A	A2RUR9	1427 aa		33	■■■□□ 2.87
SNF8-216	ENST00000573795	CDC42BPG	Q6DT37	1551 aa		32.99	■■■□□ 2.87
SNF8-216	ENST00000573795	SOS2	Q07890	1332 aa	Predicted RBP	32.99	■■■□□ 2.87
SNF8-216	ENST00000573795	RXRB	P28702	533 aa		32.98	■■■□□ 2.87
SNF8-216	ENST00000573795	UPF1	Q92900	1129 aa	Known RBP eCLIP	32.95	■■■□□ 2.87
SNF8-216	ENST00000573795	C8orf37	Q96NL8	207 aa		32.95	■■■□□ 2.87
SNF8-216	ENST00000573795	MPHOSPH9	Q99550	1183 aa		32.94	■■■□□ 2.86
SNF8-216	ENST00000573795	TECPR2	O15040	1411 aa		32.94	■■■□□ 2.86

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