RNA–Protein interactions for RNA: ENST00000572967.1

NDE1-206, Transcript of nudE neurodevelopment protein 1, humanhuman

TSL 3

Gene NDE1, Length 484 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-206ENST00000572967 SLC52A1Q9NWF4 448 aa17.87■□□□□ 0.45
NDE1-206ENST00000572967 RIMS2Q9UQ26 1411 aa17.87■□□□□ 0.45
NDE1-206ENST00000572967 TOM1O60784 492 aa17.85■□□□□ 0.45
NDE1-206ENST00000572967 CLTCL1P53675 1640 aa17.84■□□□□ 0.45
NDE1-206ENST00000572967 MED1Q15648 1581 aaPredicted RBP17.83■□□□□ 0.45
NDE1-206ENST00000572967 NKTRP30414 1462 aaKnown RBP17.83■□□□□ 0.45
NDE1-206ENST00000572967 NAIPQ13075 1403 aa17.83■□□□□ 0.45
NDE1-206ENST00000572967 CHGAP10645 457 aaKnown RBP17.83■□□□□ 0.44
NDE1-206ENST00000572967 CHD2O14647 1828 aaKnown RBP17.83■□□□□ 0.44
NDE1-206ENST00000572967 SLC26A8Q96RN1 970 aa17.82■□□□□ 0.44
NDE1-206ENST00000572967 DIP2AQ14689 1571 aa17.82■□□□□ 0.44
NDE1-206ENST00000572967 PLEKHG1Q9ULL1 1385 aa17.81■□□□□ 0.44
NDE1-206ENST00000572967 PPP1R15AO75807 674 aaPredicted RBP17.81■□□□□ 0.44
NDE1-206ENST00000572967 HSPA1LP34931 641 aa17.81■□□□□ 0.44
NDE1-206ENST00000572967 BCANQ96GW7 911 aa17.8■□□□□ 0.44
NDE1-206ENST00000572967 TRPM2O94759 1503 aa17.8■□□□□ 0.44
NDE1-206ENST00000572967 TRIM26Q12899 539 aaPredicted RBP17.79■□□□□ 0.44
NDE1-206ENST00000572967 NRXN3Q9Y4C0 1643 aa17.79■□□□□ 0.44
NDE1-206ENST00000572967 KIF1BO60333 1816 aa17.79■□□□□ 0.44
NDE1-206ENST00000572967 HFM1A2PYH4 1435 aa17.78■□□□□ 0.44
NDE1-206ENST00000572967 TMEM94Q12767 1356 aa17.78■□□□□ 0.44
NDE1-206ENST00000572967 ROBO1Q9Y6N7 1651 aa17.77■□□□□ 0.44
NDE1-206ENST00000572967 NUTM2DQ5VT03 806 aaPredicted RBP17.77■□□□□ 0.44
NDE1-206ENST00000572967 ADAMTS13Q76LX8 1427 aa17.75■□□□□ 0.43
NDE1-206ENST00000572967 KCNA6P17658 529 aa17.74■□□□□ 0.43
NDE1-206ENST00000572967 ILDR2Q71H61 639 aa17.74■□□□□ 0.43
NDE1-206ENST00000572967 RBM33Q96EV2 1170 aaKnown RBP17.74■□□□□ 0.43
NDE1-206ENST00000572967 NEXMIFQ5QGS0 1516 aa17.73■□□□□ 0.43
NDE1-206ENST00000572967 SETBP1Q9Y6X0 1596 aa17.73■□□□□ 0.43
NDE1-206ENST00000572967 XRN1Q8IZH2 1706 aaKnown RBP17.72■□□□□ 0.43
NDE1-206ENST00000572967 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.71■□□□□ 0.43
NDE1-206ENST00000572967 PROSER2Q86WR7 435 aaPredicted RBP17.7■□□□□ 0.42
NDE1-206ENST00000572967 HDGFP51858 240 aaKnown RBP17.69■□□□□ 0.42
NDE1-206ENST00000572967 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.69■□□□□ 0.42
NDE1-206ENST00000572967 MSH6P52701 1360 aa17.68■□□□□ 0.42
NDE1-206ENST00000572967 TRIM52Q96A61 297 aa17.68■□□□□ 0.42
NDE1-206ENST00000572967 PHLPP1O60346 1717 aa17.67■□□□□ 0.42
NDE1-206ENST00000572967 PPLO60437 1756 aa17.67■□□□□ 0.42
NDE1-206ENST00000572967 SETD1AO15047 1707 aaKnown RBP17.67■□□□□ 0.42
NDE1-206ENST00000572967 ZNF326Q5BKZ1 582 aaKnown RBP17.66■□□□□ 0.42
NDE1-206ENST00000572967 PTPRUQ92729 1446 aa17.65■□□□□ 0.42
NDE1-206ENST00000572967 NALCNQ8IZF0 1738 aa17.64■□□□□ 0.41
NDE1-206ENST00000572967 FAM135BQ49AJ0 1406 aa17.64■□□□□ 0.41
NDE1-206ENST00000572967 TBX22Q9Y458 520 aa17.63■□□□□ 0.41
NDE1-206ENST00000572967 PIK3R4Q99570 1358 aa17.63■□□□□ 0.41
NDE1-206ENST00000572967 IFT172Q9UG01 1749 aa17.61■□□□□ 0.41
NDE1-206ENST00000572967 SLC4A1APQ9BWU0 796 aaKnown RBP17.61■□□□□ 0.41
NDE1-206ENST00000572967 C14orf37Q86TY3 774 aa17.6■□□□□ 0.41
NDE1-206ENST00000572967 COL16A1Q07092 1604 aaPredicted RBP17.6■□□□□ 0.41
NDE1-206ENST00000572967 METP08581 1390 aa17.58■□□□□ 0.4
NDE1-206ENST00000572967 ACIN1Q9UKV3 1341 aaKnown RBP17.58■□□□□ 0.4
NDE1-206ENST00000572967 PHF23Q9BUL5 403 aaPredicted RBP17.58■□□□□ 0.4
NDE1-206ENST00000572967 NCOA3Q9Y6Q9 1424 aa17.57■□□□□ 0.4
NDE1-206ENST00000572967 FOXD1Q16676 465 aa17.57■□□□□ 0.4
NDE1-206ENST00000572967 AHDC1Q5TGY3 1603 aaPredicted RBP17.55■□□□□ 0.4
NDE1-206ENST00000572967 PCGF6Q9BYE7 350 aa17.55■□□□□ 0.4
NDE1-206ENST00000572967 AMOTL2Q9Y2J4 779 aa17.55■□□□□ 0.4
NDE1-206ENST00000572967 CCDC144AA2RUR9 1427 aa17.55■□□□□ 0.4
NDE1-206ENST00000572967 SOCS7O14512 581 aa17.54■□□□□ 0.4
NDE1-206ENST00000572967 DCCP43146 1447 aa17.53■□□□□ 0.4
NDE1-206ENST00000572967 NHSL1Q5SYE7 1610 aa17.52■□□□□ 0.4
NDE1-206ENST00000572967 SLAIN2Q9P270 581 aa17.52■□□□□ 0.4
NDE1-206ENST00000572967 ADGRL3Q9HAR2 1447 aa17.52■□□□□ 0.4
NDE1-206ENST00000572967 ASXL1Q8IXJ9 1541 aa17.52■□□□□ 0.39
NDE1-206ENST00000572967 SHPRHQ149N8 1683 aa17.52■□□□□ 0.39
NDE1-206ENST00000572967 PTCH1Q13635 1447 aa17.5■□□□□ 0.39
NDE1-206ENST00000572967 MST1RQ04912 1400 aa17.49■□□□□ 0.39
NDE1-206ENST00000572967 SETD5Q9C0A6 1442 aa17.49■□□□□ 0.39
NDE1-206ENST00000572967 ATF3P18847 181 aa17.49■□□□□ 0.39
NDE1-206ENST00000572967 CADPS2Q86UW7 1296 aa17.49■□□□□ 0.39
NDE1-206ENST00000572967 KNDC1Q76NI1 1749 aa17.48■□□□□ 0.39
NDE1-206ENST00000572967 C19orf44Q9H6X5 657 aa17.48■□□□□ 0.39
NDE1-206ENST00000572967 SPATA31E1Q6ZUB1 1445 aa17.47■□□□□ 0.39
NDE1-206ENST00000572967 RAB3GAP2Q9H2M9 1393 aa17.46■□□□□ 0.39
NDE1-206ENST00000572967 JCADQ9P266 1359 aa17.46■□□□□ 0.39
NDE1-206ENST00000572967 MPHOSPH9Q99550 1183 aa17.46■□□□□ 0.39
NDE1-206ENST00000572967 LRP6O75581 1613 aa17.46■□□□□ 0.39
NDE1-206ENST00000572967 VGFO15240 615 aaPredicted RBP17.45■□□□□ 0.38
NDE1-206ENST00000572967 HRCP23327 699 aa17.45■□□□□ 0.38
NDE1-206ENST00000572967 PRAG1Q86YV5 1406 aa17.45■□□□□ 0.38
NDE1-206ENST00000572967 RPGRIP1LQ68CZ1 1315 aa17.45■□□□□ 0.38
NDE1-206ENST00000572967 ROBO2Q9HCK4 1378 aa17.44■□□□□ 0.38
NDE1-206ENST00000572967 LAMC1P11047 1609 aa17.43■□□□□ 0.38
NDE1-206ENST00000572967 CDC42BPGQ6DT37 1551 aa17.42■□□□□ 0.38
NDE1-206ENST00000572967 BRINP3Q76B58 766 aa17.42■□□□□ 0.38
NDE1-206ENST00000572967 PIK3C2GO75747 1445 aa17.41■□□□□ 0.38
NDE1-206ENST00000572967 RGL3Q3MIN7 710 aa17.41■□□□□ 0.38
NDE1-206ENST00000572967 ADGRF5Q8IZF2 1346 aa17.41■□□□□ 0.38
NDE1-206ENST00000572967 RGS17Q9UGC6 210 aaPredicted RBP17.4■□□□□ 0.38
NDE1-206ENST00000572967 ANKRD30BQ9BXX2 1392 aa17.39■□□□□ 0.37
NDE1-206ENST00000572967 MYOM2P54296 1465 aa17.38■□□□□ 0.37
NDE1-206ENST00000572967 C1orf167Q5SNV9 1468 aa17.38■□□□□ 0.37
NDE1-206ENST00000572967 FMN2Q9NZ56 1722 aa17.35■□□□□ 0.37
NDE1-206ENST00000572967 TECPR2O15040 1411 aa17.35■□□□□ 0.37
NDE1-206ENST00000572967 NRXN1Q9ULB1 1477 aa17.35■□□□□ 0.37
NDE1-206ENST00000572967 SPATA31A6Q5VVP1 1343 aa17.34■□□□□ 0.37
NDE1-206ENST00000572967 DDX17Q92841 729 aaKnown RBP17.34■□□□□ 0.37
NDE1-206ENST00000572967 MEX3CQ5U5Q3 659 aaKnown RBP17.33■□□□□ 0.36
NDE1-206ENST00000572967 LRPPRCP42704 1394 aaKnown RBP17.32■□□□□ 0.36
NDE1-206ENST00000572967 POTEAQ6S8J7 498 aa17.32■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms