RNA–Protein interactions for RNA: ENST00000572949.5

USP6-204, Transcript of ubiquitin specific peptidase 6, humanhuman

TSL 2

Gene USP6, Length 7,862 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6-204ENST00000572949 NAP1L1P55209 391 aaKnown RBP11.57□□□□□ -0.56
USP6-204ENST00000572949 NECTIN2Q92692 538 aa11.57□□□□□ -0.56
USP6-204ENST00000572949 RUFY2Q8WXA3 655 aa11.57□□□□□ -0.56
USP6-204ENST00000572949 PDS5BQ9NTI5 1447 aa11.57□□□□□ -0.56
USP6-204ENST00000572949 IFIT2P09913 472 aaKnown RBP11.56□□□□□ -0.56
USP6-204ENST00000572949 HSP90AB2PQ58FF8 381 aa11.56□□□□□ -0.56
USP6-204ENST00000572949 PLIN1O60240 522 aa11.56□□□□□ -0.56
USP6-204ENST00000572949 PAXIP1Q6ZW49 1069 aaPredicted RBP11.56□□□□□ -0.56
USP6-204ENST00000572949 RALBP1Q15311 655 aa11.56□□□□□ -0.56
USP6-204ENST00000572949 RCAN3Q9UKA8 241 aa11.56□□□□□ -0.56
USP6-204ENST00000572949 ATP6V1DQ9Y5K8 247 aa11.56□□□□□ -0.56
USP6-204ENST00000572949 NUTM2BA6NNL0 878 aaPredicted RBP11.55□□□□□ -0.56
USP6-204ENST00000572949 NUTM2EB1AL46 878 aaPredicted RBP11.55□□□□□ -0.56
USP6-204ENST00000572949 NUTM2AQ8IVF1 878 aaPredicted RBP11.55□□□□□ -0.56
USP6-204ENST00000572949 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.55□□□□□ -0.56
USP6-204ENST00000572949 ELL2O00472 640 aaPredicted RBP11.55□□□□□ -0.56
USP6-204ENST00000572949 WDHD1O75717 1129 aaPredicted RBP11.55□□□□□ -0.56
USP6-204ENST00000572949 SAFBQ15424 915 aaKnown RBP eCLIP11.55□□□□□ -0.56
USP6-204ENST00000572949 G3BP1Q13283 466 aaKnown RBP eCLIP11.54□□□□□ -0.56
USP6-204ENST00000572949 BRMS1Q9HCU9 246 aa11.54□□□□□ -0.56
USP6-204ENST00000572949 CENPJQ9HC77 1338 aaPredicted RBP11.54□□□□□ -0.56
USP6-204ENST00000572949 ZKSCAN1P17029 563 aaPredicted RBP11.54□□□□□ -0.56
USP6-204ENST00000572949 PIP4K2BP78356 416 aa11.54□□□□□ -0.56
USP6-204ENST00000572949 SPDYE4A6NLX3 237 aa11.53□□□□□ -0.56
USP6-204ENST00000572949 CCDC97Q96F63 343 aaPredicted RBP11.53□□□□□ -0.56
USP6-204ENST00000572949 FAM177BA6PVY3 158 aa11.53□□□□□ -0.56
USP6-204ENST00000572949 VGFO15240 615 aaPredicted RBP11.53□□□□□ -0.56
USP6-204ENST00000572949 GPS2Q13227 327 aa11.53□□□□□ -0.56
USP6-204ENST00000572949 FOXD4L6Q3SYB3 417 aaPredicted RBP11.53□□□□□ -0.56
USP6-204ENST00000572949 FOXD4L3Q6VB84 417 aaPredicted RBP11.53□□□□□ -0.56
USP6-204ENST00000572949 NLRP2Q9NX02 1062 aa11.53□□□□□ -0.56
USP6-204ENST00000572949 OFD1O75665 1012 aa11.53□□□□□ -0.56
USP6-204ENST00000572949 EVC2Q86UK5 1308 aa11.52□□□□□ -0.56
USP6-204ENST00000572949 RIC3Q7Z5B4 369 aa11.52□□□□□ -0.56
USP6-204ENST00000572949 TMEM87AQ8NBN3 555 aa11.52□□□□□ -0.56
USP6-204ENST00000572949 KIF6Q6ZMV9 814 aa11.52□□□□□ -0.57
USP6-204ENST00000572949 ATP2B2Q01814 1243 aa11.52□□□□□ -0.57
USP6-204ENST00000572949 RBM5P52756 815 aaKnown RBP eCLIP11.52□□□□□ -0.57
USP6-204ENST00000572949 OSCARQ8IYS5 282 aa11.52□□□□□ -0.57
USP6-204ENST00000572949 UACAQ9BZF9 1416 aa11.52□□□□□ -0.57
USP6-204ENST00000572949 IBSPP21815 317 aaPredicted RBP11.52□□□□□ -0.57
USP6-204ENST00000572949 ANO2Q9NQ90 1003 aa11.51□□□□□ -0.57
USP6-204ENST00000572949 ANKRD45Q5TZF3 282 aa11.51□□□□□ -0.57
USP6-204ENST00000572949 RNF20Q5VTR2 975 aa11.51□□□□□ -0.57
USP6-204ENST00000572949 MINK1Q8N4C8 1332 aaPredicted RBP11.51□□□□□ -0.57
USP6-204ENST00000572949 RALYLQ86SE5 291 aaKnown RBP11.51□□□□□ -0.57
USP6-204ENST00000572949 HSPA5P11021 654 aaKnown RBP11.51□□□□□ -0.57
USP6-204ENST00000572949 XBP1P17861 261 aa11.51□□□□□ -0.57
USP6-204ENST00000572949 NEUROD6Q96NK8 337 aa11.51□□□□□ -0.57
USP6-204ENST00000572949 STRN4Q9NRL3 753 aa11.51□□□□□ -0.57
USP6-204ENST00000572949 FAM69CQ0P6D2 419 aa11.51□□□□□ -0.57
USP6-204ENST00000572949 SLC3A2P08195 630 aaKnown RBP11.5□□□□□ -0.57
USP6-204ENST00000572949 NACADO15069 1562 aa11.5□□□□□ -0.57
USP6-204ENST00000572949 CGNL1Q0VF96 1302 aa11.5□□□□□ -0.57
USP6-204ENST00000572949 RSPH4AQ5TD94 716 aa11.5□□□□□ -0.57
USP6-204ENST00000572949 MPHOSPH10O00566 681 aaKnown RBP11.5□□□□□ -0.57
USP6-204ENST00000572949 CCDC173Q0VFZ6 552 aa11.5□□□□□ -0.57
USP6-204ENST00000572949 WASHC4Q2M389 1173 aa11.5□□□□□ -0.57
USP6-204ENST00000572949 RRP7AQ9Y3A4 280 aaKnown RBP11.5□□□□□ -0.57
USP6-204ENST00000572949 AIMP1Q12904 312 aaKnown RBP11.49□□□□□ -0.57
USP6-204ENST00000572949 SYCP1Q15431 976 aa11.49□□□□□ -0.57
USP6-204ENST00000572949 RBM42Q9BTD8 480 aaKnown RBP11.48□□□□□ -0.57
USP6-204ENST00000572949 CDR1P51861 262 aa11.48□□□□□ -0.57
USP6-204ENST00000572949 CDK5RAP3Q96JB5 506 aa11.48□□□□□ -0.57
USP6-204ENST00000572949 RUFY1Q96T51 708 aa11.48□□□□□ -0.57
USP6-204ENST00000572949 MPHOSPH9Q99550 1183 aa11.47□□□□□ -0.57
USP6-204ENST00000572949 WDR70Q9NW82 654 aa11.47□□□□□ -0.57
USP6-204ENST00000572949 FKBP5Q13451 457 aaPredicted RBP11.47□□□□□ -0.57
USP6-204ENST00000572949 GOLGA6L3A6NEY3 463 aa11.46□□□□□ -0.57
USP6-204ENST00000572949 TBC1D2BQ9UPU7 963 aa11.46□□□□□ -0.57
USP6-204ENST00000572949 FOSBP53539 338 aa11.46□□□□□ -0.57
USP6-204ENST00000572949 SOGA1O94964 1423 aa11.46□□□□□ -0.57
USP6-204ENST00000572949 SART3Q15020 963 aaKnown RBP11.46□□□□□ -0.57
USP6-204ENST00000572949 NUTM2GQ5VZR2 741 aa11.45□□□□□ -0.58
USP6-204ENST00000572949 MYCNP04198 464 aaPredicted RBP11.45□□□□□ -0.58
USP6-204ENST00000572949 KRT18P05783 430 aaKnown RBP11.45□□□□□ -0.58
USP6-204ENST00000572949 BICD2Q8TD16 824 aa11.45□□□□□ -0.58
USP6-204ENST00000572949 TRIM21P19474 475 aaKnown RBP11.45□□□□□ -0.58
USP6-204ENST00000572949 PDE3BQ13370 1112 aa11.45□□□□□ -0.58
USP6-204ENST00000572949 ZNF592Q92610 1267 aa11.45□□□□□ -0.58
USP6-204ENST00000572949 HOMER1Q86YM7 354 aa11.44□□□□□ -0.58
USP6-204ENST00000572949 GNL3LQ9NVN8 582 aaKnown RBP11.44□□□□□ -0.58
USP6-204ENST00000572949 NEBLO76041 1014 aa11.44□□□□□ -0.58
USP6-204ENST00000572949 GPRASP1Q5JY77 1395 aa11.44□□□□□ -0.58
USP6-204ENST00000572949 SETD5Q9C0A6 1442 aa11.44□□□□□ -0.58
USP6-204ENST00000572949 MYO6Q9UM54 1294 aa11.44□□□□□ -0.58
USP6-204ENST00000572949 HMGB2P26583 209 aaKnown RBP11.44□□□□□ -0.58
USP6-204ENST00000572949 CECR2Q9BXF3 1484 aa11.43□□□□□ -0.58
USP6-204ENST00000572949 TSPYL4Q9UJ04 414 aa11.43□□□□□ -0.58
USP6-204ENST00000572949 AK7Q96M32 723 aa11.43□□□□□ -0.58
USP6-204ENST00000572949 ROCK1Q13464 1354 aa11.43□□□□□ -0.58
USP6-204ENST00000572949 MATR3P43243 847 aaKnown RBP eCLIP11.43□□□□□ -0.58
USP6-204ENST00000572949 ZSCAN29Q8IWY8 852 aaPredicted RBP11.43□□□□□ -0.58
USP6-204ENST00000572949 ZRSR2Q15696 482 aaKnown RBP11.43□□□□□ -0.58
USP6-204ENST00000572949 PDCL3Q9H2J4 239 aa11.43□□□□□ -0.58
USP6-204ENST00000572949 ERC2O15083 957 aa11.43□□□□□ -0.58
USP6-204ENST00000572949 CCDC18Q5T9S5 1454 aa11.43□□□□□ -0.58
USP6-204ENST00000572949 TTLL12Q14166 644 aaPredicted RBP11.43□□□□□ -0.58
USP6-204ENST00000572949 PROSER2Q86WR7 435 aaPredicted RBP11.42□□□□□ -0.58
USP6-204ENST00000572949 FMN1Q68DA7 1419 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms