RNA–Protein interactions for RNA: ENST00000572656.2

TRAPPC1-205, Transcript of trafficking protein particle complex 1, humanhuman

TSL 2

Gene TRAPPC1, Length 409 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1-205ENST00000572656 HDGFP51858 240 aaKnown RBP15.29■□□□□ 0.04
TRAPPC1-205ENST00000572656 XIRP1Q702N8 1843 aaKnown RBP15.29■□□□□ 0.04
TRAPPC1-205ENST00000572656 NKTRP30414 1462 aaKnown RBP15.28■□□□□ 0.04
TRAPPC1-205ENST00000572656 PLEKHG1Q9ULL1 1385 aa15.27■□□□□ 0.04
TRAPPC1-205ENST00000572656 ZFYVE9O95405 1425 aa15.26■□□□□ 0.03
TRAPPC1-205ENST00000572656 MSH6P52701 1360 aa15.26■□□□□ 0.03
TRAPPC1-205ENST00000572656 PPP1R15AO75807 674 aaPredicted RBP15.26■□□□□ 0.03
TRAPPC1-205ENST00000572656 RIMS2Q9UQ26 1411 aa15.26■□□□□ 0.03
TRAPPC1-205ENST00000572656 NWD1Q149M9 1564 aa15.25■□□□□ 0.03
TRAPPC1-205ENST00000572656 SLAIN2Q9P270 581 aa15.25■□□□□ 0.03
TRAPPC1-205ENST00000572656 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.24■□□□□ 0.03
TRAPPC1-205ENST00000572656 TBX22Q9Y458 520 aa15.24■□□□□ 0.03
TRAPPC1-205ENST00000572656 ROBO1Q9Y6N7 1651 aa15.22■□□□□ 0.03
TRAPPC1-205ENST00000572656 CHGAP10645 457 aaKnown RBP15.21■□□□□ 0.03
TRAPPC1-205ENST00000572656 POTEAQ6S8J7 498 aa15.21■□□□□ 0.03
TRAPPC1-205ENST00000572656 ROCK1Q13464 1354 aa15.21■□□□□ 0.02
TRAPPC1-205ENST00000572656 NCOA3Q9Y6Q9 1424 aa15.2■□□□□ 0.02
TRAPPC1-205ENST00000572656 TMEM131LA2VDJ0 1609 aa15.2■□□□□ 0.02
TRAPPC1-205ENST00000572656 JCADQ9P266 1359 aa15.18■□□□□ 0.02
TRAPPC1-205ENST00000572656 UNC13BO14795 1591 aa15.18■□□□□ 0.02
TRAPPC1-205ENST00000572656 PIK3R4Q99570 1358 aa15.17■□□□□ 0.02
TRAPPC1-205ENST00000572656 NUTM2DQ5VT03 806 aaPredicted RBP15.17■□□□□ 0.02
TRAPPC1-205ENST00000572656 C14orf37Q86TY3 774 aa15.17■□□□□ 0.02
TRAPPC1-205ENST00000572656 ADAMTS13Q76LX8 1427 aa15.17■□□□□ 0.02
TRAPPC1-205ENST00000572656 NUP155O75694 1391 aa15.16■□□□□ 0.02
TRAPPC1-205ENST00000572656 GCC2Q8IWJ2 1684 aa15.16■□□□□ 0.02
TRAPPC1-205ENST00000572656 CADPS2Q86UW7 1296 aa15.15■□□□□ 0.02
TRAPPC1-205ENST00000572656 C19orf44Q9H6X5 657 aa15.15■□□□□ 0.02
TRAPPC1-205ENST00000572656 CHD2O14647 1828 aaKnown RBP15.13■□□□□ 0.01
TRAPPC1-205ENST00000572656 ATF3P18847 181 aa15.13■□□□□ 0.01
TRAPPC1-205ENST00000572656 DIP2AQ14689 1571 aa15.13■□□□□ 0.01
TRAPPC1-205ENST00000572656 E9PCH4 1651 aa15.12■□□□□ 0.01
TRAPPC1-205ENST00000572656 AMOTL2Q9Y2J4 779 aa15.12■□□□□ 0.01
TRAPPC1-205ENST00000572656 IQGAP3Q86VI3 1631 aa15.12■□□□□ 0.01
TRAPPC1-205ENST00000572656 ITGAEP38570 1179 aa15.11■□□□□ 0.01
TRAPPC1-205ENST00000572656 PHLPP1O60346 1717 aa15.11■□□□□ 0.01
TRAPPC1-205ENST00000572656 SPATA31A6Q5VVP1 1343 aa15.11■□□□□ 0.01
TRAPPC1-205ENST00000572656 MYO5BQ9ULV0 1848 aa15.1■□□□□ 0.01
TRAPPC1-205ENST00000572656 COL16A1Q07092 1604 aaPredicted RBP15.1■□□□□ 0.01
TRAPPC1-205ENST00000572656 PTPRUQ92729 1446 aa15.09■□□□□ 0.01
TRAPPC1-205ENST00000572656 TRPM2O94759 1503 aa15.09■□□□□ 0.01
TRAPPC1-205ENST00000572656 MEX3CQ5U5Q3 659 aaKnown RBP15.07■□□□□ 0
TRAPPC1-205ENST00000572656 BRINP3Q76B58 766 aa15.07■□□□□ 0
TRAPPC1-205ENST00000572656 AHDC1Q5TGY3 1603 aaPredicted RBP15.06■□□□□ 0
TRAPPC1-205ENST00000572656 ZNF326Q5BKZ1 582 aaKnown RBP15.06■□□□□ 0
TRAPPC1-205ENST00000572656 ZNF772Q68DY9 489 aaPredicted RBP15.06■□□□□ 0
TRAPPC1-205ENST00000572656 LRP6O75581 1613 aa15.06■□□□□ 0
TRAPPC1-205ENST00000572656 SIPA1L2Q9P2F8 1722 aaPredicted RBP15.06■□□□□ 0
TRAPPC1-205ENST00000572656 DCCP43146 1447 aa15.05■□□□□ -0
TRAPPC1-205ENST00000572656 PPARGC1BQ86YN6 1023 aaKnown RBP15.04■□□□□ -0
TRAPPC1-205ENST00000572656 SETBP1Q9Y6X0 1596 aa15.03■□□□□ -0
TRAPPC1-205ENST00000572656 METP08581 1390 aa15.02■□□□□ -0
TRAPPC1-205ENST00000572656 MST1RQ04912 1400 aa15□□□□□ -0.01
TRAPPC1-205ENST00000572656 NRXN3Q9Y4C0 1643 aa15□□□□□ -0.01
TRAPPC1-205ENST00000572656 NUTM2BA6NNL0 878 aaPredicted RBP15□□□□□ -0.01
TRAPPC1-205ENST00000572656 NUTM2EB1AL46 878 aaPredicted RBP15□□□□□ -0.01
TRAPPC1-205ENST00000572656 NUTM2AQ8IVF1 878 aaPredicted RBP15□□□□□ -0.01
TRAPPC1-205ENST00000572656 SETD5Q9C0A6 1442 aa15□□□□□ -0.01
TRAPPC1-205ENST00000572656 ASXL1Q8IXJ9 1541 aa14.99□□□□□ -0.01
TRAPPC1-205ENST00000572656 TRIM52Q96A61 297 aa14.99□□□□□ -0.01
TRAPPC1-205ENST00000572656 LRRC59Q96AG4 307 aaKnown RBP14.99□□□□□ -0.01
TRAPPC1-205ENST00000572656 XRN1Q8IZH2 1706 aaKnown RBP14.99□□□□□ -0.01
TRAPPC1-205ENST00000572656 SHPRHQ149N8 1683 aa14.99□□□□□ -0.01
TRAPPC1-205ENST00000572656 RXRBP28702 533 aa14.98□□□□□ -0.01
TRAPPC1-205ENST00000572656 ADGRL3Q9HAR2 1447 aa14.98□□□□□ -0.01
TRAPPC1-205ENST00000572656 UPF1Q92900 1129 aaKnown RBP eCLIP14.97□□□□□ -0.01
TRAPPC1-205ENST00000572656 SPHKAPQ2M3C7 1700 aa14.97□□□□□ -0.01
TRAPPC1-205ENST00000572656 NEXMIFQ5QGS0 1516 aa14.96□□□□□ -0.02
TRAPPC1-205ENST00000572656 AFF2P51816 1311 aa14.95□□□□□ -0.02
TRAPPC1-205ENST00000572656 SETD1AO15047 1707 aaKnown RBP14.95□□□□□ -0.02
TRAPPC1-205ENST00000572656 NAIPQ13075 1403 aa14.95□□□□□ -0.02
TRAPPC1-205ENST00000572656 RRBP1Q9P2E9 1410 aaKnown RBP14.95□□□□□ -0.02
TRAPPC1-205ENST00000572656 VGFO15240 615 aaPredicted RBP14.95□□□□□ -0.02
TRAPPC1-205ENST00000572656 DDX17Q92841 729 aaKnown RBP14.94□□□□□ -0.02
TRAPPC1-205ENST00000572656 CLTCL1P53675 1640 aa14.94□□□□□ -0.02
TRAPPC1-205ENST00000572656 CDK12Q9NYV4 1490 aaPredicted RBP14.93□□□□□ -0.02
TRAPPC1-205ENST00000572656 PNPLA6Q8IY17 1366 aa14.92□□□□□ -0.02
TRAPPC1-205ENST00000572656 C1orf167Q5SNV9 1468 aa14.92□□□□□ -0.02
TRAPPC1-205ENST00000572656 NHSL1Q5SYE7 1610 aa14.92□□□□□ -0.02
TRAPPC1-205ENST00000572656 PTCH1Q13635 1447 aa14.92□□□□□ -0.02
TRAPPC1-205ENST00000572656 RPGRIP1LQ68CZ1 1315 aa14.92□□□□□ -0.02
TRAPPC1-205ENST00000572656 C8orf37Q96NL8 207 aa14.91□□□□□ -0.02
TRAPPC1-205ENST00000572656 ROBO2Q9HCK4 1378 aa14.9□□□□□ -0.02
TRAPPC1-205ENST00000572656 QTRT2Q9H974 415 aaKnown RBP14.9□□□□□ -0.02
TRAPPC1-205ENST00000572656 RBM6P78332 1123 aaKnown RBP14.89□□□□□ -0.03
TRAPPC1-205ENST00000572656 SLC4A1APQ9BWU0 796 aaKnown RBP14.89□□□□□ -0.03
TRAPPC1-205ENST00000572656 ORAI2Q96SN7 254 aa14.88□□□□□ -0.03
TRAPPC1-205ENST00000572656 HFM1A2PYH4 1435 aa14.88□□□□□ -0.03
TRAPPC1-205ENST00000572656 PRAG1Q86YV5 1406 aa14.88□□□□□ -0.03
TRAPPC1-205ENST00000572656 SOS2Q07890 1332 aaPredicted RBP14.88□□□□□ -0.03
TRAPPC1-205ENST00000572656 NALCNQ8IZF0 1738 aa14.87□□□□□ -0.03
TRAPPC1-205ENST00000572656 NGLY1Q96IV0 654 aa14.87□□□□□ -0.03
TRAPPC1-205ENST00000572656 ADAMTS2O95450 1211 aa14.86□□□□□ -0.03
TRAPPC1-205ENST00000572656 KIF1BO60333 1816 aa14.84□□□□□ -0.03
TRAPPC1-205ENST00000572656 RGS12O14924 1447 aa14.83□□□□□ -0.03
TRAPPC1-205ENST00000572656 LAMC1P11047 1609 aa14.83□□□□□ -0.04
TRAPPC1-205ENST00000572656 USP21Q9UK80 565 aa14.82□□□□□ -0.04
TRAPPC1-205ENST00000572656 FOXD1Q16676 465 aa14.81□□□□□ -0.04
TRAPPC1-205ENST00000572656 ESCO1Q5FWF5 840 aa14.81□□□□□ -0.04
TRAPPC1-205ENST00000572656 FNBP4Q8N3X1 1017 aaPredicted RBP14.81□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms