RNA–Protein interactions for RNA: ENST00000571545.1

CIITA-207, Transcript of class II major histocompatibility complex transactivator, humanhuman

TSL 3

Gene CIITA, Length 567 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-207ENST00000571545 NKTRP30414 1462 aaKnown RBP14.8□□□□□ -0.04
CIITA-207ENST00000571545 MYO5BQ9ULV0 1848 aa14.8□□□□□ -0.04
CIITA-207ENST00000571545 ITGAEP38570 1179 aa14.79□□□□□ -0.04
CIITA-207ENST00000571545 NWD1Q149M9 1564 aa14.79□□□□□ -0.04
CIITA-207ENST00000571545 ZFYVE9O95405 1425 aa14.78□□□□□ -0.04
CIITA-207ENST00000571545 PLEKHG1Q9ULL1 1385 aa14.78□□□□□ -0.04
CIITA-207ENST00000571545 PPP1R15AO75807 674 aaPredicted RBP14.78□□□□□ -0.04
CIITA-207ENST00000571545 PIP4K2BP78356 416 aa14.78□□□□□ -0.04
CIITA-207ENST00000571545 ABCF1Q8NE71 845 aaKnown RBP eCLIP14.78□□□□□ -0.04
CIITA-207ENST00000571545 SPHKAPQ2M3C7 1700 aa14.78□□□□□ -0.04
CIITA-207ENST00000571545 DIP2AQ14689 1571 aa14.77□□□□□ -0.04
CIITA-207ENST00000571545 RIMS2Q9UQ26 1411 aa14.77□□□□□ -0.04
CIITA-207ENST00000571545 XIRP1Q702N8 1843 aaKnown RBP14.76□□□□□ -0.05
CIITA-207ENST00000571545 ALKQ9UM73 1620 aa14.75□□□□□ -0.05
CIITA-207ENST00000571545 KCNA6P17658 529 aa14.75□□□□□ -0.05
CIITA-207ENST00000571545 PPARGC1BQ86YN6 1023 aaKnown RBP14.75□□□□□ -0.05
CIITA-207ENST00000571545 BCANQ96GW7 911 aa14.75□□□□□ -0.05
CIITA-207ENST00000571545 CHD2O14647 1828 aaKnown RBP14.72□□□□□ -0.05
CIITA-207ENST00000571545 CHGAP10645 457 aaKnown RBP14.72□□□□□ -0.05
CIITA-207ENST00000571545 HSPA1LP34931 641 aa14.72□□□□□ -0.05
CIITA-207ENST00000571545 SLC26A8Q96RN1 970 aa14.72□□□□□ -0.05
CIITA-207ENST00000571545 HFM1A2PYH4 1435 aa14.72□□□□□ -0.05
CIITA-207ENST00000571545 NAIPQ13075 1403 aa14.72□□□□□ -0.05
CIITA-207ENST00000571545 PIK3R4Q99570 1358 aa14.72□□□□□ -0.05
CIITA-207ENST00000571545 TMEM94Q12767 1356 aa14.71□□□□□ -0.06
CIITA-207ENST00000571545 NCOA3Q9Y6Q9 1424 aa14.7□□□□□ -0.06
CIITA-207ENST00000571545 TRPM2O94759 1503 aa14.7□□□□□ -0.06
CIITA-207ENST00000571545 MSH6P52701 1360 aa14.7□□□□□ -0.06
CIITA-207ENST00000571545 MED1Q15648 1581 aaPredicted RBP14.69□□□□□ -0.06
CIITA-207ENST00000571545 PROSER2Q86WR7 435 aaPredicted RBP14.69□□□□□ -0.06
CIITA-207ENST00000571545 TBX22Q9Y458 520 aa14.69□□□□□ -0.06
CIITA-207ENST00000571545 KIF1BO60333 1816 aa14.68□□□□□ -0.06
CIITA-207ENST00000571545 FAM135BQ49AJ0 1406 aa14.67□□□□□ -0.06
CIITA-207ENST00000571545 SETBP1Q9Y6X0 1596 aa14.66□□□□□ -0.06
CIITA-207ENST00000571545 ADAMTS13Q76LX8 1427 aa14.66□□□□□ -0.06
CIITA-207ENST00000571545 ACIN1Q9UKV3 1341 aaKnown RBP14.66□□□□□ -0.06
CIITA-207ENST00000571545 CLTCL1P53675 1640 aa14.64□□□□□ -0.07
CIITA-207ENST00000571545 ROBO1Q9Y6N7 1651 aa14.64□□□□□ -0.07
CIITA-207ENST00000571545 ZNF326Q5BKZ1 582 aaKnown RBP14.63□□□□□ -0.07
CIITA-207ENST00000571545 TRIM52Q96A61 297 aa14.62□□□□□ -0.07
CIITA-207ENST00000571545 SOCS7O14512 581 aa14.61□□□□□ -0.07
CIITA-207ENST00000571545 NEXMIFQ5QGS0 1516 aa14.61□□□□□ -0.07
CIITA-207ENST00000571545 NRXN3Q9Y4C0 1643 aa14.6□□□□□ -0.07
CIITA-207ENST00000571545 ILDR2Q71H61 639 aa14.6□□□□□ -0.07
CIITA-207ENST00000571545 C14orf37Q86TY3 774 aa14.6□□□□□ -0.07
CIITA-207ENST00000571545 XRN1Q8IZH2 1706 aaKnown RBP14.6□□□□□ -0.07
CIITA-207ENST00000571545 DCCP43146 1447 aa14.59□□□□□ -0.07
CIITA-207ENST00000571545 NUTM2DQ5VT03 806 aaPredicted RBP14.59□□□□□ -0.07
CIITA-207ENST00000571545 CADPS2Q86UW7 1296 aa14.59□□□□□ -0.07
CIITA-207ENST00000571545 SLC4A1APQ9BWU0 796 aaKnown RBP14.59□□□□□ -0.07
CIITA-207ENST00000571545 SIPA1L2Q9P2F8 1722 aaPredicted RBP14.58□□□□□ -0.08
CIITA-207ENST00000571545 SLAIN2Q9P270 581 aa14.57□□□□□ -0.08
CIITA-207ENST00000571545 RPGRIP1LQ68CZ1 1315 aa14.57□□□□□ -0.08
CIITA-207ENST00000571545 PHLPP1O60346 1717 aa14.57□□□□□ -0.08
CIITA-207ENST00000571545 ATF3P18847 181 aa14.56□□□□□ -0.08
CIITA-207ENST00000571545 C19orf44Q9H6X5 657 aa14.56□□□□□ -0.08
CIITA-207ENST00000571545 VGFO15240 615 aaPredicted RBP14.55□□□□□ -0.08
CIITA-207ENST00000571545 RBM33Q96EV2 1170 aaKnown RBP14.55□□□□□ -0.08
CIITA-207ENST00000571545 AMOTL2Q9Y2J4 779 aa14.55□□□□□ -0.08
CIITA-207ENST00000571545 CCDC144AA2RUR9 1427 aa14.54□□□□□ -0.08
CIITA-207ENST00000571545 PPLO60437 1756 aa14.54□□□□□ -0.08
CIITA-207ENST00000571545 PTPRUQ92729 1446 aa14.53□□□□□ -0.08
CIITA-207ENST00000571545 AHDC1Q5TGY3 1603 aaPredicted RBP14.52□□□□□ -0.09
CIITA-207ENST00000571545 PTCH1Q13635 1447 aa14.51□□□□□ -0.09
CIITA-207ENST00000571545 PRAG1Q86YV5 1406 aa14.51□□□□□ -0.09
CIITA-207ENST00000571545 JCADQ9P266 1359 aa14.51□□□□□ -0.09
CIITA-207ENST00000571545 ADGRL3Q9HAR2 1447 aa14.5□□□□□ -0.09
CIITA-207ENST00000571545 METP08581 1390 aa14.5□□□□□ -0.09
CIITA-207ENST00000571545 SETD1AO15047 1707 aaKnown RBP14.5□□□□□ -0.09
CIITA-207ENST00000571545 COL16A1Q07092 1604 aaPredicted RBP14.5□□□□□ -0.09
CIITA-207ENST00000571545 SETD5Q9C0A6 1442 aa14.48□□□□□ -0.09
CIITA-207ENST00000571545 ANKRD30BQ9BXX2 1392 aa14.47□□□□□ -0.09
CIITA-207ENST00000571545 NALCNQ8IZF0 1738 aa14.47□□□□□ -0.09
CIITA-207ENST00000571545 SHPRHQ149N8 1683 aa14.47□□□□□ -0.09
CIITA-207ENST00000571545 MPHOSPH9Q99550 1183 aa14.47□□□□□ -0.09
CIITA-207ENST00000571545 IFT172Q9UG01 1749 aa14.46□□□□□ -0.09
CIITA-207ENST00000571545 ASXL1Q8IXJ9 1541 aa14.46□□□□□ -0.09
CIITA-207ENST00000571545 SPATA31A6Q5VVP1 1343 aa14.46□□□□□ -0.09
CIITA-207ENST00000571545 MST1RQ04912 1400 aa14.45□□□□□ -0.1
CIITA-207ENST00000571545 SPATA31E1Q6ZUB1 1445 aa14.44□□□□□ -0.1
CIITA-207ENST00000571545 NHSL1Q5SYE7 1610 aa14.44□□□□□ -0.1
CIITA-207ENST00000571545 BRINP3Q76B58 766 aa14.43□□□□□ -0.1
CIITA-207ENST00000571545 LAMC1P11047 1609 aa14.42□□□□□ -0.1
CIITA-207ENST00000571545 MAPK8IP2Q13387 824 aaPredicted RBP14.42□□□□□ -0.1
CIITA-207ENST00000571545 KNDC1Q76NI1 1749 aa14.41□□□□□ -0.1
CIITA-207ENST00000571545 CDC42BPGQ6DT37 1551 aa14.4□□□□□ -0.1
CIITA-207ENST00000571545 TECPR2O15040 1411 aa14.4□□□□□ -0.1
CIITA-207ENST00000571545 PIK3C2GO75747 1445 aa14.4□□□□□ -0.1
CIITA-207ENST00000571545 MYOM2P54296 1465 aa14.39□□□□□ -0.11
CIITA-207ENST00000571545 RAB3GAP2Q9H2M9 1393 aa14.39□□□□□ -0.11
CIITA-207ENST00000571545 ROBO2Q9HCK4 1378 aa14.39□□□□□ -0.11
CIITA-207ENST00000571545 C1orf167Q5SNV9 1468 aa14.38□□□□□ -0.11
CIITA-207ENST00000571545 RGL3Q3MIN7 710 aa14.38□□□□□ -0.11
CIITA-207ENST00000571545 MEX3CQ5U5Q3 659 aaKnown RBP14.38□□□□□ -0.11
CIITA-207ENST00000571545 LRRC59Q96AG4 307 aaKnown RBP14.37□□□□□ -0.11
CIITA-207ENST00000571545 ADGRF5Q8IZF2 1346 aa14.37□□□□□ -0.11
CIITA-207ENST00000571545 RGS17Q9UGC6 210 aaPredicted RBP14.36□□□□□ -0.11
CIITA-207ENST00000571545 LRPPRCP42704 1394 aaKnown RBP14.35□□□□□ -0.11
CIITA-207ENST00000571545 HRCP23327 699 aa14.35□□□□□ -0.11
CIITA-207ENST00000571545 ZNF772Q68DY9 489 aaPredicted RBP14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms