RNA–Protein interactions for RNA: ENST00000571442.5

SMG6-209, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 588 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-209ENST00000571442 NPHP4O75161 1426 aaPredicted RBP10.39□□□□□ -0.75
SMG6-209ENST00000571442 LTBP4Q8N2S1 1624 aa10.38□□□□□ -0.75
SMG6-209ENST00000571442 TXNDC2Q86VQ3 553 aa10.38□□□□□ -0.75
SMG6-209ENST00000571442 STRCP1A6NGW2 1772 aa10.38□□□□□ -0.75
SMG6-209ENST00000571442 RIMS2Q9UQ26 1411 aa10.38□□□□□ -0.75
SMG6-209ENST00000571442 NEXMIFQ5QGS0 1516 aa10.37□□□□□ -0.75
SMG6-209ENST00000571442 ZNF335Q9H4Z2 1342 aaPredicted RBP10.36□□□□□ -0.75
SMG6-209ENST00000571442 ANKRD30BQ9BXX2 1392 aa10.36□□□□□ -0.75
SMG6-209ENST00000571442 SPATA31E1Q6ZUB1 1445 aa10.35□□□□□ -0.75
SMG6-209ENST00000571442 NRXN3Q9Y4C0 1643 aa10.35□□□□□ -0.75
SMG6-209ENST00000571442 IQSEC2Q5JU85 1478 aa10.35□□□□□ -0.75
SMG6-209ENST00000571442 PPLO60437 1756 aa10.34□□□□□ -0.75
SMG6-209ENST00000571442 CCDC144AA2RUR9 1427 aa10.33□□□□□ -0.76
SMG6-209ENST00000571442 ADAMTS13Q76LX8 1427 aa10.33□□□□□ -0.76
SMG6-209ENST00000571442 IFT172Q9UG01 1749 aa10.33□□□□□ -0.76
SMG6-209ENST00000571442 EID1Q9Y6B2 187 aa10.33□□□□□ -0.76
SMG6-209ENST00000571442 ACIN1Q9UKV3 1341 aaKnown RBP10.33□□□□□ -0.76
SMG6-209ENST00000571442 DHX57Q6P158 1386 aaKnown RBP10.32□□□□□ -0.76
SMG6-209ENST00000571442 PLEKHG1Q9ULL1 1385 aa10.32□□□□□ -0.76
SMG6-209ENST00000571442 ZNF326Q5BKZ1 582 aaKnown RBP10.32□□□□□ -0.76
SMG6-209ENST00000571442 SLC26A8Q96RN1 970 aa10.32□□□□□ -0.76
SMG6-209ENST00000571442 RGL3Q3MIN7 710 aa10.31□□□□□ -0.76
SMG6-209ENST00000571442 SETD1AO15047 1707 aaKnown RBP10.3□□□□□ -0.76
SMG6-209ENST00000571442 DISP3Q9P2K9 1392 aa10.3□□□□□ -0.76
SMG6-209ENST00000571442 PCGF6Q9BYE7 350 aa10.3□□□□□ -0.76
SMG6-209ENST00000571442 SETBP1Q9Y6X0 1596 aa10.3□□□□□ -0.76
SMG6-209ENST00000571442 XIRP1Q702N8 1843 aaKnown RBP10.29□□□□□ -0.76
SMG6-209ENST00000571442 PPP1R15AO75807 674 aaPredicted RBP10.29□□□□□ -0.76
SMG6-209ENST00000571442 ADGRF5Q8IZF2 1346 aa10.29□□□□□ -0.76
SMG6-209ENST00000571442 CHD2O14647 1828 aaKnown RBP10.28□□□□□ -0.76
SMG6-209ENST00000571442 NWD1Q149M9 1564 aa10.28□□□□□ -0.76
SMG6-209ENST00000571442 PTPRUQ92729 1446 aa10.28□□□□□ -0.76
SMG6-209ENST00000571442 ABCF1Q8NE71 845 aaKnown RBP eCLIP10.28□□□□□ -0.76
SMG6-209ENST00000571442 SIN3AQ96ST3 1273 aa10.27□□□□□ -0.77
SMG6-209ENST00000571442 LRRC7Q96NW7 1537 aa10.27□□□□□ -0.77
SMG6-209ENST00000571442 METP08581 1390 aa10.26□□□□□ -0.77
SMG6-209ENST00000571442 RBM33Q96EV2 1170 aaKnown RBP10.26□□□□□ -0.77
SMG6-209ENST00000571442 BCANQ96GW7 911 aa10.26□□□□□ -0.77
SMG6-209ENST00000571442 ASXL1Q8IXJ9 1541 aa10.26□□□□□ -0.77
SMG6-209ENST00000571442 RPGRIP1LQ68CZ1 1315 aa10.26□□□□□ -0.77
SMG6-209ENST00000571442 DIP2AQ14689 1571 aa10.26□□□□□ -0.77
SMG6-209ENST00000571442 ALKQ9UM73 1620 aa10.25□□□□□ -0.77
SMG6-209ENST00000571442 CPS1P31327 1500 aa10.25□□□□□ -0.77
SMG6-209ENST00000571442 UBAP1LF5GYI3 381 aa10.25□□□□□ -0.77
SMG6-209ENST00000571442 HDGFP51858 240 aaKnown RBP10.25□□□□□ -0.77
SMG6-209ENST00000571442 TBX22Q9Y458 520 aa10.25□□□□□ -0.77
SMG6-209ENST00000571442 XRN1Q8IZH2 1706 aaKnown RBP10.24□□□□□ -0.77
SMG6-209ENST00000571442 NRXN1Q9ULB1 1477 aa10.24□□□□□ -0.77
SMG6-209ENST00000571442 KCNA6P17658 529 aa10.24□□□□□ -0.77
SMG6-209ENST00000571442 PIK3C2GO75747 1445 aa10.24□□□□□ -0.77
SMG6-209ENST00000571442 MYOM2P54296 1465 aa10.23□□□□□ -0.77
SMG6-209ENST00000571442 VGFO15240 615 aaPredicted RBP10.23□□□□□ -0.77
SMG6-209ENST00000571442 AMOTL2Q9Y2J4 779 aa10.21□□□□□ -0.77
SMG6-209ENST00000571442 KDM2AQ9Y2K7 1162 aa10.21□□□□□ -0.77
SMG6-209ENST00000571442 SCAF1Q9H7N4 1312 aaKnown RBP10.21□□□□□ -0.78
SMG6-209ENST00000571442 TMEM94Q12767 1356 aa10.21□□□□□ -0.78
SMG6-209ENST00000571442 NKTRP30414 1462 aaKnown RBP10.21□□□□□ -0.78
SMG6-209ENST00000571442 NEUROD1Q13562 356 aa10.2□□□□□ -0.78
SMG6-209ENST00000571442 CFAP70Q5T0N1 1121 aa10.2□□□□□ -0.78
SMG6-209ENST00000571442 TMEM132EQ6IEE7 984 aa10.2□□□□□ -0.78
SMG6-209ENST00000571442 DCAF11Q8TEB1 546 aa10.2□□□□□ -0.78
SMG6-209ENST00000571442 PIK3R4Q99570 1358 aa10.2□□□□□ -0.78
SMG6-209ENST00000571442 ILDR2Q71H61 639 aa10.19□□□□□ -0.78
SMG6-209ENST00000571442 ROBO2Q9HCK4 1378 aa10.18□□□□□ -0.78
SMG6-209ENST00000571442 PROSER2Q86WR7 435 aaPredicted RBP10.18□□□□□ -0.78
SMG6-209ENST00000571442 L3MBTL2Q969R5 705 aa10.18□□□□□ -0.78
SMG6-209ENST00000571442 C14orf93Q9H972 538 aaKnown RBP10.18□□□□□ -0.78
SMG6-209ENST00000571442 ADGRB1O14514 1584 aa10.18□□□□□ -0.78
SMG6-209ENST00000571442 PIP4K2BP78356 416 aa10.17□□□□□ -0.78
SMG6-209ENST00000571442 KNDC1Q76NI1 1749 aa10.16□□□□□ -0.78
SMG6-209ENST00000571442 NALCNQ8IZF0 1738 aa10.16□□□□□ -0.78
SMG6-209ENST00000571442 PLEKHH1Q9ULM0 1364 aa10.16□□□□□ -0.78
SMG6-209ENST00000571442 LAMC1P11047 1609 aa10.16□□□□□ -0.78
SMG6-209ENST00000571442 SOCS7O14512 581 aa10.16□□□□□ -0.78
SMG6-209ENST00000571442 SIPA1L2Q9P2F8 1722 aaPredicted RBP10.16□□□□□ -0.78
SMG6-209ENST00000571442 PRAG1Q86YV5 1406 aa10.16□□□□□ -0.78
SMG6-209ENST00000571442 LRPPRCP42704 1394 aaKnown RBP10.15□□□□□ -0.78
SMG6-209ENST00000571442 TOM1O60784 492 aa10.15□□□□□ -0.78
SMG6-209ENST00000571442 STK26Q9P289 416 aa10.15□□□□□ -0.78
SMG6-209ENST00000571442 PTCH1Q13635 1447 aa10.15□□□□□ -0.79
SMG6-209ENST00000571442 YTHDC2Q9H6S0 1430 aaKnown RBP10.15□□□□□ -0.79
SMG6-209ENST00000571442 MED1Q15648 1581 aaPredicted RBP10.14□□□□□ -0.79
SMG6-209ENST00000571442 NBPF1Q3BBV0 1214 aa10.14□□□□□ -0.79
SMG6-209ENST00000571442 NBPF8Q3BBV2 869 aa10.14□□□□□ -0.79
SMG6-209ENST00000571442 TECPR2O15040 1411 aa10.14□□□□□ -0.79
SMG6-209ENST00000571442 WAPLQ7Z5K2 1190 aa10.13□□□□□ -0.79
SMG6-209ENST00000571442 KIAA1210Q9ULL0 1709 aa10.13□□□□□ -0.79
SMG6-209ENST00000571442 ABCC11Q96J66 1382 aa10.13□□□□□ -0.79
SMG6-209ENST00000571442 TRPM1Q7Z4N2 1603 aa10.12□□□□□ -0.79
SMG6-209ENST00000571442 HSPA1LP34931 641 aa10.12□□□□□ -0.79
SMG6-209ENST00000571442 ARHGEF28Q8N1W1 1705 aaKnown RBP10.11□□□□□ -0.79
SMG6-209ENST00000571442 ADGRL3Q9HAR2 1447 aa10.11□□□□□ -0.79
SMG6-209ENST00000571442 NCOA3Q9Y6Q9 1424 aa10.11□□□□□ -0.79
SMG6-209ENST00000571442 MSH6P52701 1360 aa10.11□□□□□ -0.79
SMG6-209ENST00000571442 STAC3Q96MF2 364 aa10.1□□□□□ -0.79
SMG6-209ENST00000571442 TRAK1Q9UPV9 953 aa10.1□□□□□ -0.79
SMG6-209ENST00000571442 DLC1Q96QB1 1528 aa10.1□□□□□ -0.79
SMG6-209ENST00000571442 ROBO1Q9Y6N7 1651 aa10.09□□□□□ -0.79
SMG6-209ENST00000571442 C14orf37Q86TY3 774 aa10.09□□□□□ -0.79
SMG6-209ENST00000571442 C19orf44Q9H6X5 657 aa10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 71.3 ms