RNA–Protein interactions for RNA: ENST00000570676.1

RAB40B-203, Transcript of RAB40B, member RAS oncogene family, humanhuman

TSL 2

Gene RAB40B, Length 1,104 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-203ENST00000570676 PLEKHG1Q9ULL1 1385 aa22.92■■□□□ 1.26
RAB40B-203ENST00000570676 CHD2O14647 1828 aaKnown RBP22.92■■□□□ 1.26
RAB40B-203ENST00000570676 TOM1O60784 492 aa22.91■■□□□ 1.26
RAB40B-203ENST00000570676 NKTRP30414 1462 aaKnown RBP22.9■■□□□ 1.26
RAB40B-203ENST00000570676 CLTCL1P53675 1640 aa22.9■■□□□ 1.26
RAB40B-203ENST00000570676 TRPM2O94759 1503 aa22.89■■□□□ 1.26
RAB40B-203ENST00000570676 DIP2AQ14689 1571 aa22.88■■□□□ 1.25
RAB40B-203ENST00000570676 PIP4K2BP78356 416 aa22.87■■□□□ 1.25
RAB40B-203ENST00000570676 SLC26A8Q96RN1 970 aa22.87■■□□□ 1.25
RAB40B-203ENST00000570676 SCAF1Q9H7N4 1312 aaKnown RBP22.85■■□□□ 1.25
RAB40B-203ENST00000570676 NRXN3Q9Y4C0 1643 aa22.85■■□□□ 1.25
RAB40B-203ENST00000570676 ADAMTS13Q76LX8 1427 aa22.84■■□□□ 1.25
RAB40B-203ENST00000570676 KCNA6P17658 529 aa22.84■■□□□ 1.25
RAB40B-203ENST00000570676 CHGAP10645 457 aaKnown RBP22.83■■□□□ 1.25
RAB40B-203ENST00000570676 HSPA1LP34931 641 aa22.83■■□□□ 1.25
RAB40B-203ENST00000570676 TMEM94Q12767 1356 aa22.83■■□□□ 1.25
RAB40B-203ENST00000570676 DISP3Q9P2K9 1392 aa22.83■■□□□ 1.25
RAB40B-203ENST00000570676 KIF1BO60333 1816 aa22.82■■□□□ 1.24
RAB40B-203ENST00000570676 PPP1R15AO75807 674 aaPredicted RBP22.81■■□□□ 1.24
RAB40B-203ENST00000570676 SETBP1Q9Y6X0 1596 aa22.8■■□□□ 1.24
RAB40B-203ENST00000570676 NEXMIFQ5QGS0 1516 aa22.79■■□□□ 1.24
RAB40B-203ENST00000570676 ABCF1Q8NE71 845 aaKnown RBP eCLIP22.79■■□□□ 1.24
RAB40B-203ENST00000570676 SENP3Q9H4L4 574 aaPredicted RBP22.79■■□□□ 1.24
RAB40B-203ENST00000570676 HDGFP51858 240 aaKnown RBP22.78■■□□□ 1.24
RAB40B-203ENST00000570676 MED1Q15648 1581 aaPredicted RBP22.78■■□□□ 1.24
RAB40B-203ENST00000570676 NUTM2DQ5VT03 806 aaPredicted RBP22.77■■□□□ 1.24
RAB40B-203ENST00000570676 BCANQ96GW7 911 aa22.76■■□□□ 1.23
RAB40B-203ENST00000570676 XRN1Q8IZH2 1706 aaKnown RBP22.76■■□□□ 1.23
RAB40B-203ENST00000570676 TBX22Q9Y458 520 aa22.75■■□□□ 1.23
RAB40B-203ENST00000570676 ROBO1Q9Y6N7 1651 aa22.74■■□□□ 1.23
RAB40B-203ENST00000570676 PROSER2Q86WR7 435 aaPredicted RBP22.73■■□□□ 1.23
RAB40B-203ENST00000570676 PIK3R4Q99570 1358 aa22.73■■□□□ 1.23
RAB40B-203ENST00000570676 RBM33Q96EV2 1170 aaKnown RBP22.71■■□□□ 1.23
RAB40B-203ENST00000570676 SETD1AO15047 1707 aaKnown RBP22.71■■□□□ 1.23
RAB40B-203ENST00000570676 TRIM52Q96A61 297 aa22.7■■□□□ 1.22
RAB40B-203ENST00000570676 PTPRUQ92729 1446 aa22.7■■□□□ 1.22
RAB40B-203ENST00000570676 PPLO60437 1756 aa22.69■■□□□ 1.22
RAB40B-203ENST00000570676 FAM135BQ49AJ0 1406 aa22.69■■□□□ 1.22
RAB40B-203ENST00000570676 ILDR2Q71H61 639 aa22.68■■□□□ 1.22
RAB40B-203ENST00000570676 SIPA1L2Q9P2F8 1722 aaPredicted RBP22.68■■□□□ 1.22
RAB40B-203ENST00000570676 NCOA3Q9Y6Q9 1424 aa22.67■■□□□ 1.22
RAB40B-203ENST00000570676 MSH6P52701 1360 aa22.67■■□□□ 1.22
RAB40B-203ENST00000570676 ZNF326Q5BKZ1 582 aaKnown RBP22.65■■□□□ 1.22
RAB40B-203ENST00000570676 SLC4A1APQ9BWU0 796 aaKnown RBP22.65■■□□□ 1.22
RAB40B-203ENST00000570676 IFT172Q9UG01 1749 aa22.62■■□□□ 1.21
RAB40B-203ENST00000570676 METP08581 1390 aa22.61■■□□□ 1.21
RAB40B-203ENST00000570676 PHLPP1O60346 1717 aa22.6■■□□□ 1.21
RAB40B-203ENST00000570676 NALCNQ8IZF0 1738 aa22.59■■□□□ 1.21
RAB40B-203ENST00000570676 AMOTL2Q9Y2J4 779 aa22.58■■□□□ 1.21
RAB40B-203ENST00000570676 FOXD1Q16676 465 aa22.57■■□□□ 1.2
RAB40B-203ENST00000570676 COL16A1Q07092 1604 aaPredicted RBP22.57■■□□□ 1.2
RAB40B-203ENST00000570676 SETD5Q9C0A6 1442 aa22.57■■□□□ 1.2
RAB40B-203ENST00000570676 CCDC144AA2RUR9 1427 aa22.55■■□□□ 1.2
RAB40B-203ENST00000570676 DCCP43146 1447 aa22.55■■□□□ 1.2
RAB40B-203ENST00000570676 SPATA31E1Q6ZUB1 1445 aa22.55■■□□□ 1.2
RAB40B-203ENST00000570676 MPHOSPH9Q99550 1183 aa22.53■■□□□ 1.2
RAB40B-203ENST00000570676 SLAIN2Q9P270 581 aa22.53■■□□□ 1.2
RAB40B-203ENST00000570676 PRAG1Q86YV5 1406 aa22.53■■□□□ 1.2
RAB40B-203ENST00000570676 AHDC1Q5TGY3 1603 aaPredicted RBP22.53■■□□□ 1.2
RAB40B-203ENST00000570676 RPGRIP1LQ68CZ1 1315 aa22.52■■□□□ 1.2
RAB40B-203ENST00000570676 PTCH1Q13635 1447 aa22.51■■□□□ 1.19
RAB40B-203ENST00000570676 TRIM26Q12899 539 aaPredicted RBP22.51■■□□□ 1.19
RAB40B-203ENST00000570676 C19orf44Q9H6X5 657 aa22.51■■□□□ 1.19
RAB40B-203ENST00000570676 ADGRL3Q9HAR2 1447 aa22.5■■□□□ 1.19
RAB40B-203ENST00000570676 C14orf37Q86TY3 774 aa22.5■■□□□ 1.19
RAB40B-203ENST00000570676 RAB3GAP2Q9H2M9 1393 aa22.5■■□□□ 1.19
RAB40B-203ENST00000570676 VGFO15240 615 aaPredicted RBP22.49■■□□□ 1.19
RAB40B-203ENST00000570676 CADPS2Q86UW7 1296 aa22.48■■□□□ 1.19
RAB40B-203ENST00000570676 NHSL1Q5SYE7 1610 aa22.47■■□□□ 1.19
RAB40B-203ENST00000570676 SOCS7O14512 581 aa22.47■■□□□ 1.19
RAB40B-203ENST00000570676 MST1RQ04912 1400 aa22.47■■□□□ 1.19
RAB40B-203ENST00000570676 ACIN1Q9UKV3 1341 aaKnown RBP22.46■■□□□ 1.19
RAB40B-203ENST00000570676 ASXL1Q8IXJ9 1541 aa22.46■■□□□ 1.19
RAB40B-203ENST00000570676 SHPRHQ149N8 1683 aa22.45■■□□□ 1.18
RAB40B-203ENST00000570676 ATF3P18847 181 aa22.44■■□□□ 1.18
RAB40B-203ENST00000570676 KNDC1Q76NI1 1749 aa22.44■■□□□ 1.18
RAB40B-203ENST00000570676 ROBO2Q9HCK4 1378 aa22.43■■□□□ 1.18
RAB40B-203ENST00000570676 PHF23Q9BUL5 403 aaPredicted RBP22.42■■□□□ 1.18
RAB40B-203ENST00000570676 PIK3C2GO75747 1445 aa22.41■■□□□ 1.18
RAB40B-203ENST00000570676 ANKRD30BQ9BXX2 1392 aa22.41■■□□□ 1.18
RAB40B-203ENST00000570676 ADGRF5Q8IZF2 1346 aa22.41■■□□□ 1.18
RAB40B-203ENST00000570676 JCADQ9P266 1359 aa22.4■■□□□ 1.18
RAB40B-203ENST00000570676 BRINP3Q76B58 766 aa22.39■■□□□ 1.17
RAB40B-203ENST00000570676 LAMC1P11047 1609 aa22.39■■□□□ 1.17
RAB40B-203ENST00000570676 MYOM2P54296 1465 aa22.38■■□□□ 1.17
RAB40B-203ENST00000570676 NRXN1Q9ULB1 1477 aa22.38■■□□□ 1.17
RAB40B-203ENST00000570676 RGL3Q3MIN7 710 aa22.37■■□□□ 1.17
RAB40B-203ENST00000570676 TECPR2O15040 1411 aa22.37■■□□□ 1.17
RAB40B-203ENST00000570676 CDC42BPGQ6DT37 1551 aa22.37■■□□□ 1.17
RAB40B-203ENST00000570676 LRP6O75581 1613 aa22.36■■□□□ 1.17
RAB40B-203ENST00000570676 RGS17Q9UGC6 210 aaPredicted RBP22.35■■□□□ 1.17
RAB40B-203ENST00000570676 C1orf167Q5SNV9 1468 aa22.34■■□□□ 1.17
RAB40B-203ENST00000570676 PCGF6Q9BYE7 350 aa22.33■■□□□ 1.17
RAB40B-203ENST00000570676 LRPPRCP42704 1394 aaKnown RBP22.31■■□□□ 1.16
RAB40B-203ENST00000570676 SPATA31A6Q5VVP1 1343 aa22.28■■□□□ 1.16
RAB40B-203ENST00000570676 YTHDC2Q9H6S0 1430 aaKnown RBP22.27■■□□□ 1.16
RAB40B-203ENST00000570676 FMN2Q9NZ56 1722 aa22.27■■□□□ 1.16
RAB40B-203ENST00000570676 ABCC11Q96J66 1382 aa22.26■■□□□ 1.15
RAB40B-203ENST00000570676 HRCP23327 699 aa22.26■■□□□ 1.15
RAB40B-203ENST00000570676 PLEKHH1Q9ULM0 1364 aa22.25■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms