RNA–Protein interactions for RNA: ENST00000570641.1

SPNS2-202, Transcript of sphingolipid transporter 2, humanhuman

TSL 5

Gene SPNS2, Length 783 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPNS2-202ENST00000570641 UBR1Q8IWV7 1749 aa25.83■■□□□ 1.72
SPNS2-202ENST00000570641 A2ML1A8K2U0 1454 aa25.81■■□□□ 1.72
SPNS2-202ENST00000570641 NEXMIFQ5QGS0 1516 aa25.8■■□□□ 1.72
SPNS2-202ENST00000570641 NBPF8Q3BBV2 869 aa25.8■■□□□ 1.72
SPNS2-202ENST00000570641 PRAG1Q86YV5 1406 aa25.8■■□□□ 1.72
SPNS2-202ENST00000570641 TRPM1Q7Z4N2 1603 aa25.76■■□□□ 1.71
SPNS2-202ENST00000570641 ZNF142P52746 1687 aaPredicted RBP25.75■■□□□ 1.71
SPNS2-202ENST00000570641 RALGAPBQ86X10 1494 aa25.75■■□□□ 1.71
SPNS2-202ENST00000570641 KIAA1210Q9ULL0 1709 aa25.74■■□□□ 1.71
SPNS2-202ENST00000570641 CEP170BQ9Y4F5 1589 aaPredicted RBP25.73■■□□□ 1.71
SPNS2-202ENST00000570641 ZFYVE9O95405 1425 aa25.73■■□□□ 1.71
SPNS2-202ENST00000570641 VGFO15240 615 aaPredicted RBP25.73■■□□□ 1.71
SPNS2-202ENST00000570641 NRXN1Q9ULB1 1477 aa25.72■■□□□ 1.71
SPNS2-202ENST00000570641 RIMS2Q9UQ26 1411 aa25.71■■□□□ 1.71
SPNS2-202ENST00000570641 FBXO41Q8TF61 875 aa25.71■■□□□ 1.71
SPNS2-202ENST00000570641 ADGRF5Q8IZF2 1346 aa25.69■■□□□ 1.7
SPNS2-202ENST00000570641 HDGFP51858 240 aaKnown RBP25.69■■□□□ 1.7
SPNS2-202ENST00000570641 ABCF1Q8NE71 845 aaKnown RBP eCLIP25.69■■□□□ 1.7
SPNS2-202ENST00000570641 THEMISQ8N1K5 641 aaPredicted RBP25.67■■□□□ 1.7
SPNS2-202ENST00000570641 TMEM2Q9UHN6 1383 aa25.67■■□□□ 1.7
SPNS2-202ENST00000570641 PIK3C2GO75747 1445 aa25.66■■□□□ 1.7
SPNS2-202ENST00000570641 LAMC1P11047 1609 aa25.66■■□□□ 1.7
SPNS2-202ENST00000570641 SLIT1O75093 1534 aa25.65■■□□□ 1.7
SPNS2-202ENST00000570641 ROCK2O75116 1388 aaKnown RBP25.64■■□□□ 1.69
SPNS2-202ENST00000570641 ARHGAP23Q9P227 1491 aa25.63■■□□□ 1.69
SPNS2-202ENST00000570641 NUTM2DQ5VT03 806 aaPredicted RBP25.62■■□□□ 1.69
SPNS2-202ENST00000570641 GPRASP1Q5JY77 1395 aa25.61■■□□□ 1.69
SPNS2-202ENST00000570641 CARD11Q9BXL7 1154 aa25.59■■□□□ 1.69
SPNS2-202ENST00000570641 EID1Q9Y6B2 187 aa25.59■■□□□ 1.69
SPNS2-202ENST00000570641 SETBP1Q9Y6X0 1596 aa25.58■■□□□ 1.69
SPNS2-202ENST00000570641 EIF4G2P78344 907 aaKnown RBP eCLIP25.57■■□□□ 1.68
SPNS2-202ENST00000570641 NBPF1Q3BBV0 1214 aa25.57■■□□□ 1.68
SPNS2-202ENST00000570641 CFAP70Q5T0N1 1121 aa25.57■■□□□ 1.68
SPNS2-202ENST00000570641 C14orf93Q9H972 538 aaKnown RBP25.57■■□□□ 1.68
SPNS2-202ENST00000570641 ZNF316A6NFI3 1004 aaPredicted RBP25.54■■□□□ 1.68
SPNS2-202ENST00000570641 TXNDC2Q86VQ3 553 aa25.54■■□□□ 1.68
SPNS2-202ENST00000570641 ALKQ9UM73 1620 aa25.53■■□□□ 1.68
SPNS2-202ENST00000570641 IQGAP1P46940 1657 aa25.53■■□□□ 1.68
SPNS2-202ENST00000570641 SCAF11Q99590 1463 aaKnown RBP25.53■■□□□ 1.68
SPNS2-202ENST00000570641 USP47Q96K76 1375 aa25.52■■□□□ 1.68
SPNS2-202ENST00000570641 PLEKHG1Q9ULL1 1385 aa25.52■■□□□ 1.68
SPNS2-202ENST00000570641 NRXN3Q9Y4C0 1643 aa25.52■■□□□ 1.68
SPNS2-202ENST00000570641 HSPA5P11021 654 aaKnown RBP25.51■■□□□ 1.67
SPNS2-202ENST00000570641 LTKP29376 864 aa25.51■■□□□ 1.67
SPNS2-202ENST00000570641 SETD1AO15047 1707 aaKnown RBP25.49■■□□□ 1.67
SPNS2-202ENST00000570641 ADGRB1O14514 1584 aa25.49■■□□□ 1.67
SPNS2-202ENST00000570641 POLR1AO95602 1720 aaPredicted RBP25.48■■□□□ 1.67
SPNS2-202ENST00000570641 ANKLE2Q86XL3 938 aa25.47■■□□□ 1.67
SPNS2-202ENST00000570641 BCANQ96GW7 911 aa25.46■■□□□ 1.67
SPNS2-202ENST00000570641 ASXL1Q8IXJ9 1541 aa25.44■■□□□ 1.66
SPNS2-202ENST00000570641 DIP2AQ14689 1571 aa25.44■■□□□ 1.66
SPNS2-202ENST00000570641 EIF3AQ14152 1382 aaKnown RBP25.44■■□□□ 1.66
SPNS2-202ENST00000570641 SENP3Q9H4L4 574 aaPredicted RBP25.43■■□□□ 1.66
SPNS2-202ENST00000570641 ADAMTS13Q76LX8 1427 aa25.41■■□□□ 1.66
SPNS2-202ENST00000570641 TMEM132EQ6IEE7 984 aa25.41■■□□□ 1.66
SPNS2-202ENST00000570641 HIRIP3Q9BW71 556 aaPredicted RBP25.41■■□□□ 1.66
SPNS2-202ENST00000570641 MED14O60244 1454 aa25.39■■□□□ 1.65
SPNS2-202ENST00000570641 LMTK3Q96Q04 1460 aa25.39■■□□□ 1.65
SPNS2-202ENST00000570641 YTHDC2Q9H6S0 1430 aaKnown RBP25.37■■□□□ 1.65
SPNS2-202ENST00000570641 ARHGEF28Q8N1W1 1705 aaKnown RBP25.37■■□□□ 1.65
SPNS2-202ENST00000570641 ST20-MTHFSA0A0A6YYL1 179 aa25.37■■□□□ 1.65
SPNS2-202ENST00000570641 TBX22Q9Y458 520 aa25.36■■□□□ 1.65
SPNS2-202ENST00000570641 KNDC1Q76NI1 1749 aa25.35■■□□□ 1.65
SPNS2-202ENST00000570641 LRPPRCP42704 1394 aaKnown RBP25.35■■□□□ 1.65
SPNS2-202ENST00000570641 TRAK1Q9UPV9 953 aa25.35■■□□□ 1.65
SPNS2-202ENST00000570641 NPHP4O75161 1426 aaPredicted RBP25.35■■□□□ 1.65
SPNS2-202ENST00000570641 METP08581 1390 aa25.33■■□□□ 1.65
SPNS2-202ENST00000570641 DLC1Q96QB1 1528 aa25.32■■□□□ 1.64
SPNS2-202ENST00000570641 SLC26A8Q96RN1 970 aa25.32■■□□□ 1.64
SPNS2-202ENST00000570641 STK26Q9P289 416 aa25.31■■□□□ 1.64
SPNS2-202ENST00000570641 QRICH2Q9H0J4 1663 aa25.31■■□□□ 1.64
SPNS2-202ENST00000570641 NCKAP5LQ9HCH0 1330 aa25.31■■□□□ 1.64
SPNS2-202ENST00000570641 ABCC11Q96J66 1382 aa25.3■■□□□ 1.64
SPNS2-202ENST00000570641 PIK3R4Q99570 1358 aa25.3■■□□□ 1.64
SPNS2-202ENST00000570641 SLC24A1O60721 1099 aa25.29■■□□□ 1.64
SPNS2-202ENST00000570641 CENPJQ9HC77 1338 aaPredicted RBP25.29■■□□□ 1.64
SPNS2-202ENST00000570641 HSPA2P54652 639 aa25.28■■□□□ 1.64
SPNS2-202ENST00000570641 TECPR2O15040 1411 aa25.27■■□□□ 1.64
SPNS2-202ENST00000570641 CPS1P31327 1500 aa25.27■■□□□ 1.64
SPNS2-202ENST00000570641 TESK2Q96S53 571 aa25.26■■□□□ 1.63
SPNS2-202ENST00000570641 SBNO2Q9Y2G9 1366 aa25.26■■□□□ 1.63
SPNS2-202ENST00000570641 CHD2O14647 1828 aaKnown RBP25.24■■□□□ 1.63
SPNS2-202ENST00000570641 TMF1P82094 1093 aa25.24■■□□□ 1.63
SPNS2-202ENST00000570641 SIRT1Q96EB6 747 aa25.24■■□□□ 1.63
SPNS2-202ENST00000570641 STRCQ7RTU9 1775 aa25.23■■□□□ 1.63
SPNS2-202ENST00000570641 CCDC7Q96M83 1385 aa25.23■■□□□ 1.63
SPNS2-202ENST00000570641 XRN1Q8IZH2 1706 aaKnown RBP25.23■■□□□ 1.63
SPNS2-202ENST00000570641 FAM135BQ49AJ0 1406 aa25.22■■□□□ 1.63
SPNS2-202ENST00000570641 PTPRUQ92729 1446 aa25.22■■□□□ 1.63
SPNS2-202ENST00000570641 POGKQ9P215 609 aa25.22■■□□□ 1.63
SPNS2-202ENST00000570641 WASHC2AQ641Q2 1341 aa25.2■■□□□ 1.62
SPNS2-202ENST00000570641 C11orf95C9JLR9 678 aaPredicted RBP25.2■■□□□ 1.62
SPNS2-202ENST00000570641 PRAM1Q96QH2 718 aa25.2■■□□□ 1.62
SPNS2-202ENST00000570641 KIF7Q2M1P5 1343 aa25.19■■□□□ 1.62
SPNS2-202ENST00000570641 AMOTL2Q9Y2J4 779 aa25.19■■□□□ 1.62
SPNS2-202ENST00000570641 CDCA8Q53HL2 280 aa25.18■■□□□ 1.62
SPNS2-202ENST00000570641 PTCH1Q13635 1447 aa25.17■■□□□ 1.62
SPNS2-202ENST00000570641 DISP3Q9P2K9 1392 aa25.17■■□□□ 1.62
SPNS2-202ENST00000570641 NWD1Q149M9 1564 aa25.14■■□□□ 1.62
SPNS2-202ENST00000570641 ROBO2Q9HCK4 1378 aa25.14■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms