RNA–Protein interactions for RNA: ENST00000570273.5

HERPUD1-219, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 1 (best)

Gene HERPUD1, Length 1,425 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-219ENST00000570273 UBR1Q8IWV7 1749 aa22.03■■□□□ 1.12
HERPUD1-219ENST00000570273 PRAG1Q86YV5 1406 aa22.02■■□□□ 1.12
HERPUD1-219ENST00000570273 NBPF8Q3BBV2 869 aa22.02■■□□□ 1.12
HERPUD1-219ENST00000570273 STAC3Q96MF2 364 aa22.02■■□□□ 1.12
HERPUD1-219ENST00000570273 CEP170BQ9Y4F5 1589 aaPredicted RBP22.02■■□□□ 1.12
HERPUD1-219ENST00000570273 ZNF142P52746 1687 aaPredicted RBP22.02■■□□□ 1.12
HERPUD1-219ENST00000570273 PPLO60437 1756 aa22.02■■□□□ 1.12
HERPUD1-219ENST00000570273 RIMS2Q9UQ26 1411 aa21.99■■□□□ 1.11
HERPUD1-219ENST00000570273 RALGAPBQ86X10 1494 aa21.97■■□□□ 1.11
HERPUD1-219ENST00000570273 ADGRF5Q8IZF2 1346 aa21.96■■□□□ 1.11
HERPUD1-219ENST00000570273 NRXN1Q9ULB1 1477 aa21.96■■□□□ 1.11
HERPUD1-219ENST00000570273 NUTM2DQ5VT03 806 aaPredicted RBP21.96■■□□□ 1.11
HERPUD1-219ENST00000570273 TMEM2Q9UHN6 1383 aa21.95■■□□□ 1.1
HERPUD1-219ENST00000570273 ZFYVE9O95405 1425 aa21.95■■□□□ 1.1
HERPUD1-219ENST00000570273 VGFO15240 615 aaPredicted RBP21.95■■□□□ 1.1
HERPUD1-219ENST00000570273 THEMISQ8N1K5 641 aaPredicted RBP21.93■■□□□ 1.1
HERPUD1-219ENST00000570273 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.93■■□□□ 1.1
HERPUD1-219ENST00000570273 TRPM1Q7Z4N2 1603 aa21.92■■□□□ 1.1
HERPUD1-219ENST00000570273 PIK3C2GO75747 1445 aa21.92■■□□□ 1.1
HERPUD1-219ENST00000570273 ARHGAP23Q9P227 1491 aa21.91■■□□□ 1.1
HERPUD1-219ENST00000570273 SLIT1O75093 1534 aa21.91■■□□□ 1.1
HERPUD1-219ENST00000570273 HDGFP51858 240 aaKnown RBP21.9■■□□□ 1.1
HERPUD1-219ENST00000570273 ROCK2O75116 1388 aaKnown RBP21.89■■□□□ 1.1
HERPUD1-219ENST00000570273 STRCQ7RTU9 1775 aa21.87■■□□□ 1.09
HERPUD1-219ENST00000570273 HSPA2P54652 639 aa21.87■■□□□ 1.09
HERPUD1-219ENST00000570273 EID1Q9Y6B2 187 aa21.87■■□□□ 1.09
HERPUD1-219ENST00000570273 KIAA1210Q9ULL0 1709 aa21.86■■□□□ 1.09
HERPUD1-219ENST00000570273 CFAP70Q5T0N1 1121 aa21.85■■□□□ 1.09
HERPUD1-219ENST00000570273 SENP3Q9H4L4 574 aaPredicted RBP21.85■■□□□ 1.09
HERPUD1-219ENST00000570273 GPRASP1Q5JY77 1395 aa21.85■■□□□ 1.09
HERPUD1-219ENST00000570273 SCAF11Q99590 1463 aaKnown RBP21.84■■□□□ 1.09
HERPUD1-219ENST00000570273 NBPF1Q3BBV0 1214 aa21.84■■□□□ 1.09
HERPUD1-219ENST00000570273 TXNDC2Q86VQ3 553 aa21.84■■□□□ 1.09
HERPUD1-219ENST00000570273 CARD11Q9BXL7 1154 aa21.84■■□□□ 1.09
HERPUD1-219ENST00000570273 LAMC1P11047 1609 aa21.84■■□□□ 1.09
HERPUD1-219ENST00000570273 LTKP29376 864 aa21.83■■□□□ 1.09
HERPUD1-219ENST00000570273 C14orf93Q9H972 538 aaKnown RBP21.82■■□□□ 1.08
HERPUD1-219ENST00000570273 PLEKHG1Q9ULL1 1385 aa21.82■■□□□ 1.08
HERPUD1-219ENST00000570273 SETBP1Q9Y6X0 1596 aa21.81■■□□□ 1.08
HERPUD1-219ENST00000570273 BCANQ96GW7 911 aa21.8■■□□□ 1.08
HERPUD1-219ENST00000570273 ALKQ9UM73 1620 aa21.79■■□□□ 1.08
HERPUD1-219ENST00000570273 IQGAP1P46940 1657 aa21.79■■□□□ 1.08
HERPUD1-219ENST00000570273 USP47Q96K76 1375 aa21.79■■□□□ 1.08
HERPUD1-219ENST00000570273 NRXN3Q9Y4C0 1643 aa21.78■■□□□ 1.08
HERPUD1-219ENST00000570273 EIF4G2P78344 907 aaKnown RBP eCLIP21.78■■□□□ 1.08
HERPUD1-219ENST00000570273 ANKLE2Q86XL3 938 aa21.78■■□□□ 1.08
HERPUD1-219ENST00000570273 ADGRB1O14514 1584 aa21.77■■□□□ 1.08
HERPUD1-219ENST00000570273 ASXL1Q8IXJ9 1541 aa21.76■■□□□ 1.07
HERPUD1-219ENST00000570273 POLR1AO95602 1720 aaPredicted RBP21.75■■□□□ 1.07
HERPUD1-219ENST00000570273 HSPA5P11021 654 aaKnown RBP21.75■■□□□ 1.07
HERPUD1-219ENST00000570273 ADAMTS13Q76LX8 1427 aa21.74■■□□□ 1.07
HERPUD1-219ENST00000570273 TMEM132EQ6IEE7 984 aa21.73■■□□□ 1.07
HERPUD1-219ENST00000570273 SETD1AO15047 1707 aaKnown RBP21.73■■□□□ 1.07
HERPUD1-219ENST00000570273 DIP2AQ14689 1571 aa21.71■■□□□ 1.07
HERPUD1-219ENST00000570273 ZNF316A6NFI3 1004 aaPredicted RBP21.71■■□□□ 1.07
HERPUD1-219ENST00000570273 HIRIP3Q9BW71 556 aaPredicted RBP21.71■■□□□ 1.07
HERPUD1-219ENST00000570273 EIF3AQ14152 1382 aaKnown RBP21.7■■□□□ 1.07
HERPUD1-219ENST00000570273 NPHP4O75161 1426 aaPredicted RBP21.7■■□□□ 1.06
HERPUD1-219ENST00000570273 NCKAP5LQ9HCH0 1330 aa21.7■■□□□ 1.06
HERPUD1-219ENST00000570273 MED14O60244 1454 aa21.69■■□□□ 1.06
HERPUD1-219ENST00000570273 SLC26A8Q96RN1 970 aa21.68■■□□□ 1.06
HERPUD1-219ENST00000570273 METP08581 1390 aa21.68■■□□□ 1.06
HERPUD1-219ENST00000570273 YTHDC2Q9H6S0 1430 aaKnown RBP21.68■■□□□ 1.06
HERPUD1-219ENST00000570273 TRAK1Q9UPV9 953 aa21.66■■□□□ 1.06
HERPUD1-219ENST00000570273 LRPPRCP42704 1394 aaKnown RBP21.65■■□□□ 1.06
HERPUD1-219ENST00000570273 ST20-MTHFSA0A0A6YYL1 179 aa21.65■■□□□ 1.06
HERPUD1-219ENST00000570273 STK26Q9P289 416 aa21.65■■□□□ 1.06
HERPUD1-219ENST00000570273 TBX22Q9Y458 520 aa21.65■■□□□ 1.06
HERPUD1-219ENST00000570273 DMRT2Q9Y5R5 561 aa21.63■■□□□ 1.05
HERPUD1-219ENST00000570273 ARHGEF28Q8N1W1 1705 aaKnown RBP21.61■■□□□ 1.05
HERPUD1-219ENST00000570273 DLC1Q96QB1 1528 aa21.6■■□□□ 1.05
HERPUD1-219ENST00000570273 CENPJQ9HC77 1338 aaPredicted RBP21.6■■□□□ 1.05
HERPUD1-219ENST00000570273 ABCC11Q96J66 1382 aa21.6■■□□□ 1.05
HERPUD1-219ENST00000570273 KNDC1Q76NI1 1749 aa21.59■■□□□ 1.05
HERPUD1-219ENST00000570273 PIK3R4Q99570 1358 aa21.59■■□□□ 1.05
HERPUD1-219ENST00000570273 TECPR2O15040 1411 aa21.58■■□□□ 1.05
HERPUD1-219ENST00000570273 PTPRUQ92729 1446 aa21.58■■□□□ 1.05
HERPUD1-219ENST00000570273 CPS1P31327 1500 aa21.57■■□□□ 1.04
HERPUD1-219ENST00000570273 QRICH2Q9H0J4 1663 aa21.55■■□□□ 1.04
HERPUD1-219ENST00000570273 PRAM1Q96QH2 718 aa21.55■■□□□ 1.04
HERPUD1-219ENST00000570273 TESK2Q96S53 571 aa21.55■■□□□ 1.04
HERPUD1-219ENST00000570273 POGKQ9P215 609 aa21.55■■□□□ 1.04
HERPUD1-219ENST00000570273 XRN1Q8IZH2 1706 aaKnown RBP21.54■■□□□ 1.04
HERPUD1-219ENST00000570273 AMOTL2Q9Y2J4 779 aa21.54■■□□□ 1.04
HERPUD1-219ENST00000570273 SBNO2Q9Y2G9 1366 aa21.53■■□□□ 1.04
HERPUD1-219ENST00000570273 PTCH1Q13635 1447 aa21.53■■□□□ 1.04
HERPUD1-219ENST00000570273 FAM135BQ49AJ0 1406 aa21.53■■□□□ 1.04
HERPUD1-219ENST00000570273 ROBO2Q9HCK4 1378 aa21.52■■□□□ 1.04
HERPUD1-219ENST00000570273 SAFB2Q14151 953 aaKnown RBP eCLIP21.52■■□□□ 1.04
HERPUD1-219ENST00000570273 LTBP4Q8N2S1 1624 aa21.52■■□□□ 1.04
HERPUD1-219ENST00000570273 PLEKHH1Q9ULM0 1364 aa21.51■■□□□ 1.03
HERPUD1-219ENST00000570273 TMF1P82094 1093 aa21.51■■□□□ 1.03
HERPUD1-219ENST00000570273 CCDC7Q96M83 1385 aa21.5■■□□□ 1.03
HERPUD1-219ENST00000570273 DISP3Q9P2K9 1392 aa21.5■■□□□ 1.03
HERPUD1-219ENST00000570273 C11orf95C9JLR9 678 aaPredicted RBP21.5■■□□□ 1.03
HERPUD1-219ENST00000570273 SIRT1Q96EB6 747 aa21.5■■□□□ 1.03
HERPUD1-219ENST00000570273 WAPLQ7Z5K2 1190 aa21.49■■□□□ 1.03
HERPUD1-219ENST00000570273 NWD1Q149M9 1564 aa21.49■■□□□ 1.03
HERPUD1-219ENST00000570273 KIF7Q2M1P5 1343 aa21.49■■□□□ 1.03
HERPUD1-219ENST00000570273 WASHC2AQ641Q2 1341 aa21.49■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 7.2 ms