RNA–Protein interactions for RNA: ENST00000569990.2

HCCAT5-201, hepatocellular carcinoma associated transcript 5, humanhuman

TSL 1 (best) BASIC

Gene HCCAT5, Length 1,079 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCCAT5-201ENST00000569990 TRPM2O94759 1503 aa14.26□□□□□ -0.13
HCCAT5-201ENST00000569990 TMEM2Q9UHN6 1383 aa14.26□□□□□ -0.13
HCCAT5-201ENST00000569990 TMEM131LA2VDJ0 1609 aa14.26□□□□□ -0.13
HCCAT5-201ENST00000569990 HRCP23327 699 aa14.25□□□□□ -0.13
HCCAT5-201ENST00000569990 U3KPZ7 1027 aaPredicted RBP14.25□□□□□ -0.13
HCCAT5-201ENST00000569990 MED14O60244 1454 aa14.25□□□□□ -0.13
HCCAT5-201ENST00000569990 SCAF11Q99590 1463 aaKnown RBP14.25□□□□□ -0.13
HCCAT5-201ENST00000569990 CLTCL1P53675 1640 aa14.23□□□□□ -0.13
HCCAT5-201ENST00000569990 LTKP29376 864 aa14.23□□□□□ -0.13
HCCAT5-201ENST00000569990 NPHP4O75161 1426 aaPredicted RBP14.23□□□□□ -0.13
HCCAT5-201ENST00000569990 CHGAP10645 457 aaKnown RBP14.22□□□□□ -0.13
HCCAT5-201ENST00000569990 TXNDC2Q86VQ3 553 aa14.22□□□□□ -0.13
HCCAT5-201ENST00000569990 EID1Q9Y6B2 187 aa14.22□□□□□ -0.13
HCCAT5-201ENST00000569990 MYO5BQ9ULV0 1848 aa14.21□□□□□ -0.13
HCCAT5-201ENST00000569990 ZFYVE9O95405 1425 aa14.21□□□□□ -0.13
HCCAT5-201ENST00000569990 TRIM26Q12899 539 aaPredicted RBP14.2□□□□□ -0.14
HCCAT5-201ENST00000569990 IQGAP1P46940 1657 aa14.2□□□□□ -0.14
HCCAT5-201ENST00000569990 RIMS2Q9UQ26 1411 aa14.19□□□□□ -0.14
HCCAT5-201ENST00000569990 ZNF335Q9H4Z2 1342 aaPredicted RBP14.16□□□□□ -0.14
HCCAT5-201ENST00000569990 CCDC144AA2RUR9 1427 aa14.16□□□□□ -0.14
HCCAT5-201ENST00000569990 LTBP4Q8N2S1 1624 aa14.16□□□□□ -0.14
HCCAT5-201ENST00000569990 CAPN15O75808 1086 aa14.16□□□□□ -0.14
HCCAT5-201ENST00000569990 ABCF1Q8NE71 845 aaKnown RBP eCLIP14.16□□□□□ -0.14
HCCAT5-201ENST00000569990 HDGFP51858 240 aaKnown RBP14.15□□□□□ -0.14
HCCAT5-201ENST00000569990 KIF1BO60333 1816 aa14.15□□□□□ -0.14
HCCAT5-201ENST00000569990 PLEKHG1Q9ULL1 1385 aa14.14□□□□□ -0.15
HCCAT5-201ENST00000569990 PPP1R15AO75807 674 aaPredicted RBP14.14□□□□□ -0.15
HCCAT5-201ENST00000569990 ZNF326Q5BKZ1 582 aaKnown RBP14.13□□□□□ -0.15
HCCAT5-201ENST00000569990 SPINK5Q9NQ38 1064 aaPredicted RBP14.13□□□□□ -0.15
HCCAT5-201ENST00000569990 NEXMIFQ5QGS0 1516 aa14.13□□□□□ -0.15
HCCAT5-201ENST00000569990 ANKRD30BQ9BXX2 1392 aa14.12□□□□□ -0.15
HCCAT5-201ENST00000569990 NUTM2DQ5VT03 806 aaPredicted RBP14.12□□□□□ -0.15
HCCAT5-201ENST00000569990 SPATA31E1Q6ZUB1 1445 aa14.11□□□□□ -0.15
HCCAT5-201ENST00000569990 CERKQ8TCT0 537 aa14.11□□□□□ -0.15
HCCAT5-201ENST00000569990 SLC26A8Q96RN1 970 aa14.11□□□□□ -0.15
HCCAT5-201ENST00000569990 DSG3P32926 999 aa14.09□□□□□ -0.15
HCCAT5-201ENST00000569990 BCANQ96GW7 911 aa14.09□□□□□ -0.15
HCCAT5-201ENST00000569990 CPS1P31327 1500 aa14.09□□□□□ -0.15
HCCAT5-201ENST00000569990 RPGRIP1LQ68CZ1 1315 aa14.09□□□□□ -0.15
HCCAT5-201ENST00000569990 ADAMTS13Q76LX8 1427 aa14.08□□□□□ -0.15
HCCAT5-201ENST00000569990 RGL3Q3MIN7 710 aa14.07□□□□□ -0.16
HCCAT5-201ENST00000569990 TBX22Q9Y458 520 aa14.07□□□□□ -0.16
HCCAT5-201ENST00000569990 DIP2AQ14689 1571 aa14.07□□□□□ -0.16
HCCAT5-201ENST00000569990 SETBP1Q9Y6X0 1596 aa14.07□□□□□ -0.16
HCCAT5-201ENST00000569990 STRCP1A6NGW2 1772 aa14.06□□□□□ -0.16
HCCAT5-201ENST00000569990 IQSEC2Q5JU85 1478 aa14.06□□□□□ -0.16
HCCAT5-201ENST00000569990 NRXN3Q9Y4C0 1643 aa14.06□□□□□ -0.16
HCCAT5-201ENST00000569990 VGFO15240 615 aaPredicted RBP14.06□□□□□ -0.16
HCCAT5-201ENST00000569990 PPLO60437 1756 aa14.06□□□□□ -0.16
HCCAT5-201ENST00000569990 KCNA6P17658 529 aa14.04□□□□□ -0.16
HCCAT5-201ENST00000569990 NWD1Q149M9 1564 aa14.04□□□□□ -0.16
HCCAT5-201ENST00000569990 IFT172Q9UG01 1749 aa14.04□□□□□ -0.16
HCCAT5-201ENST00000569990 PIK3R4Q99570 1358 aa14.03□□□□□ -0.16
HCCAT5-201ENST00000569990 LRRC7Q96NW7 1537 aa14.03□□□□□ -0.16
HCCAT5-201ENST00000569990 DHX57Q6P158 1386 aaKnown RBP14.02□□□□□ -0.17
HCCAT5-201ENST00000569990 NKTRP30414 1462 aaKnown RBP14.01□□□□□ -0.17
HCCAT5-201ENST00000569990 ADGRF5Q8IZF2 1346 aa14.01□□□□□ -0.17
HCCAT5-201ENST00000569990 KCNA4P22459 653 aa14.01□□□□□ -0.17
HCCAT5-201ENST00000569990 FBXO41Q8TF61 875 aa14.01□□□□□ -0.17
HCCAT5-201ENST00000569990 CHD2O14647 1828 aaKnown RBP14□□□□□ -0.17
HCCAT5-201ENST00000569990 MYOM2P54296 1465 aa13.99□□□□□ -0.17
HCCAT5-201ENST00000569990 PTPRUQ92729 1446 aa13.99□□□□□ -0.17
HCCAT5-201ENST00000569990 METP08581 1390 aa13.99□□□□□ -0.17
HCCAT5-201ENST00000569990 PCGF6Q9BYE7 350 aa13.99□□□□□ -0.17
HCCAT5-201ENST00000569990 ALKQ9UM73 1620 aa13.99□□□□□ -0.17
HCCAT5-201ENST00000569990 PIK3C2GO75747 1445 aa13.98□□□□□ -0.17
HCCAT5-201ENST00000569990 SETD1AO15047 1707 aaKnown RBP13.98□□□□□ -0.17
HCCAT5-201ENST00000569990 NRXN1Q9ULB1 1477 aa13.98□□□□□ -0.17
HCCAT5-201ENST00000569990 ILDR1Q86SU0 546 aaPredicted RBP13.97□□□□□ -0.17
HCCAT5-201ENST00000569990 TMEM94Q12767 1356 aa13.96□□□□□ -0.17
HCCAT5-201ENST00000569990 XRN1Q8IZH2 1706 aaKnown RBP13.96□□□□□ -0.17
HCCAT5-201ENST00000569990 PROSER2Q86WR7 435 aaPredicted RBP13.96□□□□□ -0.17
HCCAT5-201ENST00000569990 AMOTL2Q9Y2J4 779 aa13.96□□□□□ -0.17
HCCAT5-201ENST00000569990 XIRP1Q702N8 1843 aaKnown RBP13.95□□□□□ -0.18
HCCAT5-201ENST00000569990 UBAP1LF5GYI3 381 aa13.94□□□□□ -0.18
HCCAT5-201ENST00000569990 DCAF11Q8TEB1 546 aa13.94□□□□□ -0.18
HCCAT5-201ENST00000569990 RBM33Q96EV2 1170 aaKnown RBP13.94□□□□□ -0.18
HCCAT5-201ENST00000569990 POTEHQ6S545 545 aa13.93□□□□□ -0.18
HCCAT5-201ENST00000569990 STAC3Q96MF2 364 aa13.93□□□□□ -0.18
HCCAT5-201ENST00000569990 SIN3AQ96ST3 1273 aa13.93□□□□□ -0.18
HCCAT5-201ENST00000569990 ASXL1Q8IXJ9 1541 aa13.93□□□□□ -0.18
HCCAT5-201ENST00000569990 PRAG1Q86YV5 1406 aa13.92□□□□□ -0.18
HCCAT5-201ENST00000569990 NCOA3Q9Y6Q9 1424 aa13.92□□□□□ -0.18
HCCAT5-201ENST00000569990 SLC4A2P04920 1241 aa13.92□□□□□ -0.18
HCCAT5-201ENST00000569990 KDM2AQ9Y2K7 1162 aa13.92□□□□□ -0.18
HCCAT5-201ENST00000569990 LAMC1P11047 1609 aa13.91□□□□□ -0.18
HCCAT5-201ENST00000569990 TOM1O60784 492 aa13.91□□□□□ -0.18
HCCAT5-201ENST00000569990 C14orf93Q9H972 538 aaKnown RBP13.91□□□□□ -0.18
HCCAT5-201ENST00000569990 PTCH1Q13635 1447 aa13.9□□□□□ -0.18
HCCAT5-201ENST00000569990 CFAP70Q5T0N1 1121 aa13.9□□□□□ -0.18
HCCAT5-201ENST00000569990 MSH6P52701 1360 aa13.89□□□□□ -0.19
HCCAT5-201ENST00000569990 NEUROD1Q13562 356 aa13.89□□□□□ -0.19
HCCAT5-201ENST00000569990 TMEM132EQ6IEE7 984 aa13.89□□□□□ -0.19
HCCAT5-201ENST00000569990 LRPPRCP42704 1394 aaKnown RBP13.88□□□□□ -0.19
HCCAT5-201ENST00000569990 ROBO2Q9HCK4 1378 aa13.88□□□□□ -0.19
HCCAT5-201ENST00000569990 TECPR2O15040 1411 aa13.88□□□□□ -0.19
HCCAT5-201ENST00000569990 L3MBTL2Q969R5 705 aa13.87□□□□□ -0.19
HCCAT5-201ENST00000569990 YTHDC2Q9H6S0 1430 aaKnown RBP13.87□□□□□ -0.19
HCCAT5-201ENST00000569990 ADGRB1O14514 1584 aa13.87□□□□□ -0.19
HCCAT5-201ENST00000569990 ABCC11Q96J66 1382 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms