RNA–Protein interactions for RNA: ENST00000569957.5

INO80E-213, Transcript of INO80 complex subunit E, humanhuman

TSL 2

Gene INO80E, Length 4,469 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
INO80E-213ENST00000569957 SMC4Q9NTJ3 1288 aa16.11■□□□□ 0.17
INO80E-213ENST00000569957 RTF1Q92541 710 aaKnown RBP16.1■□□□□ 0.17
INO80E-213ENST00000569957 RTN4Q9NQC3 1192 aaKnown RBP16.1■□□□□ 0.17
INO80E-213ENST00000569957 ADGRL1O94910 1474 aa16.09■□□□□ 0.17
INO80E-213ENST00000569957 C11orf95C9JLR9 678 aaPredicted RBP16.09■□□□□ 0.17
INO80E-213ENST00000569957 TRIM44Q96DX7 344 aaPredicted RBP16.09■□□□□ 0.17
INO80E-213ENST00000569957 PLCH2O75038 1416 aa16.09■□□□□ 0.17
INO80E-213ENST00000569957 CDCA7LQ96GN5 454 aa16.09■□□□□ 0.17
INO80E-213ENST00000569957 CABP2Q9NPB3 220 aa16.09■□□□□ 0.17
INO80E-213ENST00000569957 GGNBP2Q9H3C7 697 aa16.08■□□□□ 0.17
INO80E-213ENST00000569957 CLASP1Q7Z460 1538 aa16.08■□□□□ 0.16
INO80E-213ENST00000569957 CDC42BPAQ5VT25 1732 aa16.08■□□□□ 0.16
INO80E-213ENST00000569957 NCLP19338 710 aaKnown RBP16.08■□□□□ 0.16
INO80E-213ENST00000569957 PREX2Q70Z35 1606 aa16.07■□□□□ 0.16
INO80E-213ENST00000569957 FANCAO15360 1455 aa16.07■□□□□ 0.16
INO80E-213ENST00000569957 OS9Q13438 667 aaPredicted RBP16.07■□□□□ 0.16
INO80E-213ENST00000569957 ZNF330Q9Y3S2 320 aaPredicted RBP16.07■□□□□ 0.16
INO80E-213ENST00000569957 EID1Q9Y6B2 187 aa16.07■□□□□ 0.16
INO80E-213ENST00000569957 PNNQ9H307 717 aaKnown RBP16.06■□□□□ 0.16
INO80E-213ENST00000569957 CROCC2H7BZ55 1655 aa16.06■□□□□ 0.16
INO80E-213ENST00000569957 SLC4A10Q6U841 1118 aa16.05■□□□□ 0.16
INO80E-213ENST00000569957 COG6Q9Y2V7 657 aa16.05■□□□□ 0.16
INO80E-213ENST00000569957 ZBED9Q6R2W3 1325 aa16.04■□□□□ 0.16
INO80E-213ENST00000569957 KDM5BQ9UGL1 1544 aa16.04■□□□□ 0.16
INO80E-213ENST00000569957 ASXL2Q76L83 1435 aa16.04■□□□□ 0.16
INO80E-213ENST00000569957 SYCP2Q9BX26 1530 aa16.04■□□□□ 0.16
INO80E-213ENST00000569957 ADAMTS8Q9UP79 889 aa16.04■□□□□ 0.16
INO80E-213ENST00000569957 PZPP20742 1482 aa16.04■□□□□ 0.16
INO80E-213ENST00000569957 KDM6BO15054 1643 aa16.04■□□□□ 0.16
INO80E-213ENST00000569957 CSB-PGBD3P0DP91 1061 aa16.04■□□□□ 0.16
INO80E-213ENST00000569957 AMPHP49418 695 aa16.04■□□□□ 0.16
INO80E-213ENST00000569957 SLC12A5Q9H2X9 1139 aa16.04■□□□□ 0.16
INO80E-213ENST00000569957 CENPJQ9HC77 1338 aaPredicted RBP16.03■□□□□ 0.16
INO80E-213ENST00000569957 CRBNQ96SW2 442 aa16.03■□□□□ 0.16
INO80E-213ENST00000569957 MYO5CQ9NQX4 1742 aa16.03■□□□□ 0.16
INO80E-213ENST00000569957 SLKQ9H2G2 1235 aaPredicted RBP16.03■□□□□ 0.16
INO80E-213ENST00000569957 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.02■□□□□ 0.16
INO80E-213ENST00000569957 WDR7Q9Y4E6 1490 aa16.02■□□□□ 0.16
INO80E-213ENST00000569957 EVC2Q86UK5 1308 aa16.02■□□□□ 0.15
INO80E-213ENST00000569957 MBD5Q9P267 1494 aa16.01■□□□□ 0.15
INO80E-213ENST00000569957 NUTM2GQ5VZR2 741 aa16.01■□□□□ 0.15
INO80E-213ENST00000569957 NAP1L5Q96NT1 182 aaPredicted RBP16.01■□□□□ 0.15
INO80E-213ENST00000569957 DUOX2Q9NRD8 1548 aa16.01■□□□□ 0.15
INO80E-213ENST00000569957 SLC4A3P48751 1232 aa16.01■□□□□ 0.15
INO80E-213ENST00000569957 HMOX1P09601 288 aa16■□□□□ 0.15
INO80E-213ENST00000569957 SAMD9LQ8IVG5 1584 aa16■□□□□ 0.15
INO80E-213ENST00000569957 CNTLNQ9NXG0 1405 aa16■□□□□ 0.15
INO80E-213ENST00000569957 CGNL1Q0VF96 1302 aa16■□□□□ 0.15
INO80E-213ENST00000569957 MS4A1P11836 297 aa16■□□□□ 0.15
INO80E-213ENST00000569957 ERBINQ96RT1 1412 aa15.99■□□□□ 0.15
INO80E-213ENST00000569957 ZCCHC11Q5TAX3 1644 aaKnown RBP15.99■□□□□ 0.15
INO80E-213ENST00000569957 RRP1P56182 461 aaKnown RBP15.99■□□□□ 0.15
INO80E-213ENST00000569957 ERCC6L2Q5T890 1561 aa15.98■□□□□ 0.15
INO80E-213ENST00000569957 PDE3BQ13370 1112 aa15.98■□□□□ 0.15
INO80E-213ENST00000569957 IPO8O15397 1037 aaKnown RBP15.98■□□□□ 0.15
INO80E-213ENST00000569957 NECTIN2Q92692 538 aa15.98■□□□□ 0.15
INO80E-213ENST00000569957 MTHFSP49914 203 aa15.97■□□□□ 0.15
INO80E-213ENST00000569957 TTC37Q6PGP7 1564 aa15.97■□□□□ 0.15
INO80E-213ENST00000569957 MAST1Q9Y2H9 1570 aa15.97■□□□□ 0.15
INO80E-213ENST00000569957 KDM5DQ9BY66 1539 aa15.96■□□□□ 0.15
INO80E-213ENST00000569957 RTEL1-TNFRSF6BF6WH68 1400 aa15.96■□□□□ 0.14
INO80E-213ENST00000569957 L1TD1Q5T7N2 865 aaKnown RBP15.95■□□□□ 0.14
INO80E-213ENST00000569957 DHX29Q7Z478 1369 aaKnown RBP15.95■□□□□ 0.14
INO80E-213ENST00000569957 MFAP1P55081 439 aaKnown RBP15.95■□□□□ 0.14
INO80E-213ENST00000569957 COG3Q96JB2 828 aa15.95■□□□□ 0.14
INO80E-213ENST00000569957 SLC52A1Q9NWF4 448 aa15.95■□□□□ 0.14
INO80E-213ENST00000569957 ARAP3Q8WWN8 1544 aa15.95■□□□□ 0.14
INO80E-213ENST00000569957 DENND4BO75064 1496 aaPredicted RBP15.94■□□□□ 0.14
INO80E-213ENST00000569957 HSP90AB1P08238 724 aaKnown RBP15.94■□□□□ 0.14
INO80E-213ENST00000569957 FANCIQ9NVI1 1328 aa15.94■□□□□ 0.14
INO80E-213ENST00000569957 FAM135AQ9P2D6 1515 aa15.94■□□□□ 0.14
INO80E-213ENST00000569957 RWDD1Q9H446 243 aaPredicted RBP15.94■□□□□ 0.14
INO80E-213ENST00000569957 TEX14Q8IWB6 1497 aa15.94■□□□□ 0.14
INO80E-213ENST00000569957 KCNJ4P48050 445 aa15.94■□□□□ 0.14
INO80E-213ENST00000569957 TRAPPC8Q9Y2L5 1435 aa15.93■□□□□ 0.14
INO80E-213ENST00000569957 ARHGEF12Q9NZN5 1544 aa15.93■□□□□ 0.14
INO80E-213ENST00000569957 CASC1Q6TDU7 716 aa15.93■□□□□ 0.14
INO80E-213ENST00000569957 RIPK4P57078 832 aa15.92■□□□□ 0.14
INO80E-213ENST00000569957 TXNDC2Q86VQ3 553 aa15.92■□□□□ 0.14
INO80E-213ENST00000569957 CDC42BPBQ9Y5S2 1711 aa15.92■□□□□ 0.14
INO80E-213ENST00000569957 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.92■□□□□ 0.14
INO80E-213ENST00000569957 USP35Q9P2H5 1018 aa15.92■□□□□ 0.14
INO80E-213ENST00000569957 PRAM1Q96QH2 718 aa15.92■□□□□ 0.14
INO80E-213ENST00000569957 NAP1L2Q9ULW6 460 aaPredicted RBP15.91■□□□□ 0.14
INO80E-213ENST00000569957 GOLGA6L22H0YM25 854 aa15.91■□□□□ 0.14
INO80E-213ENST00000569957 FOXD4L1Q9NU39 408 aa15.9■□□□□ 0.14
INO80E-213ENST00000569957 PLXNC1O60486 1568 aa15.9■□□□□ 0.14
INO80E-213ENST00000569957 DIAPH1O60610 1272 aaKnown RBP15.9■□□□□ 0.14
INO80E-213ENST00000569957 PANK1Q8TE04 598 aa15.9■□□□□ 0.14
INO80E-213ENST00000569957 SLC26A8Q96RN1 970 aa15.9■□□□□ 0.14
INO80E-213ENST00000569957 PPP2R1AP30153 589 aa15.9■□□□□ 0.14
INO80E-213ENST00000569957 STK31Q9BXU1 1019 aa15.9■□□□□ 0.14
INO80E-213ENST00000569957 NPHP1O15259 732 aa15.89■□□□□ 0.13
INO80E-213ENST00000569957 PMFBP1Q8TBY8 1022 aa15.89■□□□□ 0.13
INO80E-213ENST00000569957 E9PSI1 815 aa15.89■□□□□ 0.13
INO80E-213ENST00000569957 PNISRQ8TF01 805 aaKnown RBP15.89■□□□□ 0.13
INO80E-213ENST00000569957 GZF1Q9H116 711 aaPredicted RBP15.88■□□□□ 0.13
INO80E-213ENST00000569957 CHMP4BQ9H444 224 aaKnown RBP15.88■□□□□ 0.13
INO80E-213ENST00000569957 ABCC1P33527 1531 aa15.88■□□□□ 0.13
INO80E-213ENST00000569957 RPGRIP1LQ68CZ1 1315 aa15.88■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms