RNA–Protein interactions for RNA: ENST00000569720.1

SPG7-221, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 2

Gene SPG7, Length 909 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-221ENST00000569720 E9PCH4 1651 aa20.09■□□□□ 0.81
SPG7-221ENST00000569720 IQGAP3Q86VI3 1631 aa20.09■□□□□ 0.81
SPG7-221ENST00000569720 PPP1R15AO75807 674 aaPredicted RBP20.08■□□□□ 0.81
SPG7-221ENST00000569720 TMEM94Q12767 1356 aa20.08■□□□□ 0.8
SPG7-221ENST00000569720 TMEM131LA2VDJ0 1609 aa20.07■□□□□ 0.8
SPG7-221ENST00000569720 ITGAEP38570 1179 aa20.07■□□□□ 0.8
SPG7-221ENST00000569720 PROSER2Q86WR7 435 aaPredicted RBP20.07■□□□□ 0.8
SPG7-221ENST00000569720 RIMS2Q9UQ26 1411 aa20.06■□□□□ 0.8
SPG7-221ENST00000569720 NKTRP30414 1462 aaKnown RBP20.05■□□□□ 0.8
SPG7-221ENST00000569720 NWD1Q149M9 1564 aa20.05■□□□□ 0.8
SPG7-221ENST00000569720 ZFYVE9O95405 1425 aa20.05■□□□□ 0.8
SPG7-221ENST00000569720 CHGAP10645 457 aaKnown RBP20.05■□□□□ 0.8
SPG7-221ENST00000569720 PHF23Q9BUL5 403 aaPredicted RBP20.05■□□□□ 0.8
SPG7-221ENST00000569720 PLEKHG1Q9ULL1 1385 aa20.05■□□□□ 0.8
SPG7-221ENST00000569720 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.04■□□□□ 0.8
SPG7-221ENST00000569720 NUP155O75694 1391 aa20.04■□□□□ 0.8
SPG7-221ENST00000569720 PPARGC1BQ86YN6 1023 aaKnown RBP20.03■□□□□ 0.8
SPG7-221ENST00000569720 CHD2O14647 1828 aaKnown RBP20.03■□□□□ 0.8
SPG7-221ENST00000569720 FAM135BQ49AJ0 1406 aa20.02■□□□□ 0.79
SPG7-221ENST00000569720 MSH6P52701 1360 aa19.99■□□□□ 0.79
SPG7-221ENST00000569720 RBM33Q96EV2 1170 aaKnown RBP19.98■□□□□ 0.79
SPG7-221ENST00000569720 TBX22Q9Y458 520 aa19.98■□□□□ 0.79
SPG7-221ENST00000569720 ROBO1Q9Y6N7 1651 aa19.97■□□□□ 0.79
SPG7-221ENST00000569720 DIP2AQ14689 1571 aa19.95■□□□□ 0.78
SPG7-221ENST00000569720 SPHKAPQ2M3C7 1700 aa19.95■□□□□ 0.78
SPG7-221ENST00000569720 NUTM2DQ5VT03 806 aaPredicted RBP19.94■□□□□ 0.78
SPG7-221ENST00000569720 PIK3R4Q99570 1358 aa19.92■□□□□ 0.78
SPG7-221ENST00000569720 NCOA3Q9Y6Q9 1424 aa19.92■□□□□ 0.78
SPG7-221ENST00000569720 C14orf37Q86TY3 774 aa19.91■□□□□ 0.78
SPG7-221ENST00000569720 SLAIN2Q9P270 581 aa19.91■□□□□ 0.78
SPG7-221ENST00000569720 ADAMTS13Q76LX8 1427 aa19.91■□□□□ 0.78
SPG7-221ENST00000569720 RRBP1Q9P2E9 1410 aaKnown RBP19.9■□□□□ 0.78
SPG7-221ENST00000569720 TRPM2O94759 1503 aa19.9■□□□□ 0.78
SPG7-221ENST00000569720 PHLPP1O60346 1717 aa19.88■□□□□ 0.77
SPG7-221ENST00000569720 ZNF326Q5BKZ1 582 aaKnown RBP19.87■□□□□ 0.77
SPG7-221ENST00000569720 SIPA1L2Q9P2F8 1722 aaPredicted RBP19.85■□□□□ 0.77
SPG7-221ENST00000569720 KIF1BO60333 1816 aa19.84■□□□□ 0.77
SPG7-221ENST00000569720 CADPS2Q86UW7 1296 aa19.84■□□□□ 0.77
SPG7-221ENST00000569720 C19orf44Q9H6X5 657 aa19.84■□□□□ 0.77
SPG7-221ENST00000569720 AMOTL2Q9Y2J4 779 aa19.84■□□□□ 0.77
SPG7-221ENST00000569720 NAIPQ13075 1403 aa19.84■□□□□ 0.77
SPG7-221ENST00000569720 ATF3P18847 181 aa19.83■□□□□ 0.77
SPG7-221ENST00000569720 SETBP1Q9Y6X0 1596 aa19.83■□□□□ 0.76
SPG7-221ENST00000569720 CLTCL1P53675 1640 aa19.81■□□□□ 0.76
SPG7-221ENST00000569720 NRXN3Q9Y4C0 1643 aa19.81■□□□□ 0.76
SPG7-221ENST00000569720 RGS17Q9UGC6 210 aaPredicted RBP19.8■□□□□ 0.76
SPG7-221ENST00000569720 JCADQ9P266 1359 aa19.8■□□□□ 0.76
SPG7-221ENST00000569720 PTPRUQ92729 1446 aa19.79■□□□□ 0.76
SPG7-221ENST00000569720 TRIM52Q96A61 297 aa19.79■□□□□ 0.76
SPG7-221ENST00000569720 XRN1Q8IZH2 1706 aaKnown RBP19.78■□□□□ 0.76
SPG7-221ENST00000569720 COL16A1Q07092 1604 aaPredicted RBP19.77■□□□□ 0.76
SPG7-221ENST00000569720 HFM1A2PYH4 1435 aa19.76■□□□□ 0.75
SPG7-221ENST00000569720 NEXMIFQ5QGS0 1516 aa19.76■□□□□ 0.75
SPG7-221ENST00000569720 DCCP43146 1447 aa19.75■□□□□ 0.75
SPG7-221ENST00000569720 AHDC1Q5TGY3 1603 aaPredicted RBP19.74■□□□□ 0.75
SPG7-221ENST00000569720 SLC4A1APQ9BWU0 796 aaKnown RBP19.73■□□□□ 0.75
SPG7-221ENST00000569720 METP08581 1390 aa19.72■□□□□ 0.75
SPG7-221ENST00000569720 VGFO15240 615 aaPredicted RBP19.71■□□□□ 0.75
SPG7-221ENST00000569720 POTEAQ6S8J7 498 aa19.71■□□□□ 0.75
SPG7-221ENST00000569720 SPATA31A6Q5VVP1 1343 aa19.71■□□□□ 0.75
SPG7-221ENST00000569720 SHPRHQ149N8 1683 aa19.7■□□□□ 0.74
SPG7-221ENST00000569720 BRINP3Q76B58 766 aa19.69■□□□□ 0.74
SPG7-221ENST00000569720 MEX3CQ5U5Q3 659 aaKnown RBP19.68■□□□□ 0.74
SPG7-221ENST00000569720 RPGRIP1LQ68CZ1 1315 aa19.68■□□□□ 0.74
SPG7-221ENST00000569720 ADGRL3Q9HAR2 1447 aa19.67■□□□□ 0.74
SPG7-221ENST00000569720 NALCNQ8IZF0 1738 aa19.66■□□□□ 0.74
SPG7-221ENST00000569720 MST1RQ04912 1400 aa19.66■□□□□ 0.74
SPG7-221ENST00000569720 ASXL1Q8IXJ9 1541 aa19.66■□□□□ 0.74
SPG7-221ENST00000569720 PPLO60437 1756 aa19.65■□□□□ 0.74
SPG7-221ENST00000569720 SETD1AO15047 1707 aaKnown RBP19.65■□□□□ 0.74
SPG7-221ENST00000569720 NHSL1Q5SYE7 1610 aa19.64■□□□□ 0.73
SPG7-221ENST00000569720 LRP6O75581 1613 aa19.63■□□□□ 0.73
SPG7-221ENST00000569720 PTCH1Q13635 1447 aa19.62■□□□□ 0.73
SPG7-221ENST00000569720 ZNF772Q68DY9 489 aaPredicted RBP19.61■□□□□ 0.73
SPG7-221ENST00000569720 SETD5Q9C0A6 1442 aa19.6■□□□□ 0.73
SPG7-221ENST00000569720 LRRC59Q96AG4 307 aaKnown RBP19.6■□□□□ 0.73
SPG7-221ENST00000569720 CCDC144AA2RUR9 1427 aa19.59■□□□□ 0.73
SPG7-221ENST00000569720 NUTM2BA6NNL0 878 aaPredicted RBP19.58■□□□□ 0.72
SPG7-221ENST00000569720 NUTM2EB1AL46 878 aaPredicted RBP19.58■□□□□ 0.72
SPG7-221ENST00000569720 FOXD1Q16676 465 aa19.58■□□□□ 0.72
SPG7-221ENST00000569720 NUTM2AQ8IVF1 878 aaPredicted RBP19.58■□□□□ 0.72
SPG7-221ENST00000569720 PRAG1Q86YV5 1406 aa19.57■□□□□ 0.72
SPG7-221ENST00000569720 ROBO2Q9HCK4 1378 aa19.57■□□□□ 0.72
SPG7-221ENST00000569720 ACIN1Q9UKV3 1341 aaKnown RBP19.56■□□□□ 0.72
SPG7-221ENST00000569720 C1orf167Q5SNV9 1468 aa19.56■□□□□ 0.72
SPG7-221ENST00000569720 MPHOSPH9Q99550 1183 aa19.55■□□□□ 0.72
SPG7-221ENST00000569720 RGL3Q3MIN7 710 aa19.53■□□□□ 0.72
SPG7-221ENST00000569720 DDX17Q92841 729 aaKnown RBP19.53■□□□□ 0.72
SPG7-221ENST00000569720 IFT172Q9UG01 1749 aa19.53■□□□□ 0.72
SPG7-221ENST00000569720 ANKRD30BQ9BXX2 1392 aa19.52■□□□□ 0.72
SPG7-221ENST00000569720 LAMC1P11047 1609 aa19.51■□□□□ 0.71
SPG7-221ENST00000569720 PNPLA6Q8IY17 1366 aa19.51■□□□□ 0.71
SPG7-221ENST00000569720 SPATA31E1Q6ZUB1 1445 aa19.51■□□□□ 0.71
SPG7-221ENST00000569720 ADGRF5Q8IZF2 1346 aa19.51■□□□□ 0.71
SPG7-221ENST00000569720 RXRBP28702 533 aa19.5■□□□□ 0.71
SPG7-221ENST00000569720 ORAI2Q96SN7 254 aa19.49■□□□□ 0.71
SPG7-221ENST00000569720 AFF2P51816 1311 aa19.49■□□□□ 0.71
SPG7-221ENST00000569720 CDC42BPGQ6DT37 1551 aa19.48■□□□□ 0.71
SPG7-221ENST00000569720 SOS2Q07890 1332 aaPredicted RBP19.47■□□□□ 0.71
SPG7-221ENST00000569720 C8orf37Q96NL8 207 aa19.46■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms