RNA–Protein interactions for RNA: ENST00000568977.1

CPNE7-209, Transcript of copine 7, humanhuman

TSL 5

Gene CPNE7, Length 682 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE7-209ENST00000568977 NWD1Q149M9 1564 aa28.29■■■□□ 2.12
CPNE7-209ENST00000568977 SLC26A8Q96RN1 970 aa28.29■■■□□ 2.12
CPNE7-209ENST00000568977 SPHKAPQ2M3C7 1700 aa28.29■■■□□ 2.12
CPNE7-209ENST00000568977 HSPA1LP34931 641 aa28.28■■■□□ 2.12
CPNE7-209ENST00000568977 PLEKHG1Q9ULL1 1385 aa28.27■■■□□ 2.12
CPNE7-209ENST00000568977 NAIPQ13075 1403 aa28.26■■■□□ 2.12
CPNE7-209ENST00000568977 CHGAP10645 457 aaKnown RBP28.25■■■□□ 2.11
CPNE7-209ENST00000568977 NKTRP30414 1462 aaKnown RBP28.24■■■□□ 2.11
CPNE7-209ENST00000568977 PPP1R15AO75807 674 aaPredicted RBP28.24■■■□□ 2.11
CPNE7-209ENST00000568977 KCNA6P17658 529 aa28.23■■■□□ 2.11
CPNE7-209ENST00000568977 BCANQ96GW7 911 aa28.23■■■□□ 2.11
CPNE7-209ENST00000568977 TMEM94Q12767 1356 aa28.21■■■□□ 2.11
CPNE7-209ENST00000568977 HDGFP51858 240 aaKnown RBP28.2■■■□□ 2.1
CPNE7-209ENST00000568977 SENP3Q9H4L4 574 aaPredicted RBP28.2■■■□□ 2.1
CPNE7-209ENST00000568977 CHD2O14647 1828 aaKnown RBP28.19■■■□□ 2.1
CPNE7-209ENST00000568977 HFM1A2PYH4 1435 aa28.18■■■□□ 2.1
CPNE7-209ENST00000568977 ABCF1Q8NE71 845 aaKnown RBP eCLIP28.18■■■□□ 2.1
CPNE7-209ENST00000568977 DIP2AQ14689 1571 aa28.16■■■□□ 2.1
CPNE7-209ENST00000568977 MED1Q15648 1581 aaPredicted RBP28.16■■■□□ 2.1
CPNE7-209ENST00000568977 ILDR2Q71H61 639 aa28.15■■■□□ 2.1
CPNE7-209ENST00000568977 ADAMTS13Q76LX8 1427 aa28.14■■■□□ 2.1
CPNE7-209ENST00000568977 TRPM2O94759 1503 aa28.13■■■□□ 2.09
CPNE7-209ENST00000568977 NUTM2DQ5VT03 806 aaPredicted RBP28.13■■■□□ 2.09
CPNE7-209ENST00000568977 PROSER2Q86WR7 435 aaPredicted RBP28.13■■■□□ 2.09
CPNE7-209ENST00000568977 CLTCL1P53675 1640 aa28.13■■■□□ 2.09
CPNE7-209ENST00000568977 RBM33Q96EV2 1170 aaKnown RBP28.1■■■□□ 2.09
CPNE7-209ENST00000568977 TBX22Q9Y458 520 aa28.1■■■□□ 2.09
CPNE7-209ENST00000568977 NRXN3Q9Y4C0 1643 aa28.07■■■□□ 2.08
CPNE7-209ENST00000568977 KIF1BO60333 1816 aa28.05■■■□□ 2.08
CPNE7-209ENST00000568977 MSH6P52701 1360 aa28.05■■■□□ 2.08
CPNE7-209ENST00000568977 ROBO1Q9Y6N7 1651 aa28.04■■■□□ 2.08
CPNE7-209ENST00000568977 SETBP1Q9Y6X0 1596 aa28.04■■■□□ 2.08
CPNE7-209ENST00000568977 FAM135BQ49AJ0 1406 aa28.04■■■□□ 2.08
CPNE7-209ENST00000568977 PIK3R4Q99570 1358 aa28.04■■■□□ 2.08
CPNE7-209ENST00000568977 TRIM52Q96A61 297 aa28.03■■■□□ 2.08
CPNE7-209ENST00000568977 NEXMIFQ5QGS0 1516 aa28.02■■■□□ 2.08
CPNE7-209ENST00000568977 ZNF326Q5BKZ1 582 aaKnown RBP28■■■□□ 2.07
CPNE7-209ENST00000568977 XRN1Q8IZH2 1706 aaKnown RBP27.98■■■□□ 2.07
CPNE7-209ENST00000568977 PTPRUQ92729 1446 aa27.97■■■□□ 2.07
CPNE7-209ENST00000568977 NCOA3Q9Y6Q9 1424 aa27.97■■■□□ 2.07
CPNE7-209ENST00000568977 SLC4A1APQ9BWU0 796 aaKnown RBP27.96■■■□□ 2.07
CPNE7-209ENST00000568977 SIPA1L2Q9P2F8 1722 aaPredicted RBP27.92■■■□□ 2.06
CPNE7-209ENST00000568977 SOCS7O14512 581 aa27.92■■■□□ 2.06
CPNE7-209ENST00000568977 C14orf37Q86TY3 774 aa27.91■■■□□ 2.06
CPNE7-209ENST00000568977 AMOTL2Q9Y2J4 779 aa27.91■■■□□ 2.06
CPNE7-209ENST00000568977 SLAIN2Q9P270 581 aa27.88■■■□□ 2.05
CPNE7-209ENST00000568977 METP08581 1390 aa27.87■■■□□ 2.05
CPNE7-209ENST00000568977 PHLPP1O60346 1717 aa27.87■■■□□ 2.05
CPNE7-209ENST00000568977 PHF23Q9BUL5 403 aaPredicted RBP27.87■■■□□ 2.05
CPNE7-209ENST00000568977 PPLO60437 1756 aa27.86■■■□□ 2.05
CPNE7-209ENST00000568977 SETD1AO15047 1707 aaKnown RBP27.85■■■□□ 2.05
CPNE7-209ENST00000568977 FOXD1Q16676 465 aa27.83■■■□□ 2.05
CPNE7-209ENST00000568977 C19orf44Q9H6X5 657 aa27.83■■■□□ 2.05
CPNE7-209ENST00000568977 CADPS2Q86UW7 1296 aa27.82■■■□□ 2.04
CPNE7-209ENST00000568977 DCCP43146 1447 aa27.81■■■□□ 2.04
CPNE7-209ENST00000568977 COL16A1Q07092 1604 aaPredicted RBP27.81■■■□□ 2.04
CPNE7-209ENST00000568977 ATF3P18847 181 aa27.8■■■□□ 2.04
CPNE7-209ENST00000568977 CCDC144AA2RUR9 1427 aa27.79■■■□□ 2.04
CPNE7-209ENST00000568977 RPGRIP1LQ68CZ1 1315 aa27.78■■■□□ 2.04
CPNE7-209ENST00000568977 NALCNQ8IZF0 1738 aa27.78■■■□□ 2.04
CPNE7-209ENST00000568977 VGFO15240 615 aaPredicted RBP27.77■■■□□ 2.04
CPNE7-209ENST00000568977 MPHOSPH9Q99550 1183 aa27.76■■■□□ 2.03
CPNE7-209ENST00000568977 AHDC1Q5TGY3 1603 aaPredicted RBP27.76■■■□□ 2.03
CPNE7-209ENST00000568977 ADGRL3Q9HAR2 1447 aa27.75■■■□□ 2.03
CPNE7-209ENST00000568977 IFT172Q9UG01 1749 aa27.74■■■□□ 2.03
CPNE7-209ENST00000568977 SETD5Q9C0A6 1442 aa27.74■■■□□ 2.03
CPNE7-209ENST00000568977 PTCH1Q13635 1447 aa27.73■■■□□ 2.03
CPNE7-209ENST00000568977 SPATA31E1Q6ZUB1 1445 aa27.72■■■□□ 2.03
CPNE7-209ENST00000568977 JCADQ9P266 1359 aa27.72■■■□□ 2.03
CPNE7-209ENST00000568977 MST1RQ04912 1400 aa27.71■■■□□ 2.03
CPNE7-209ENST00000568977 PRAG1Q86YV5 1406 aa27.71■■■□□ 2.03
CPNE7-209ENST00000568977 ASXL1Q8IXJ9 1541 aa27.7■■■□□ 2.02
CPNE7-209ENST00000568977 ACIN1Q9UKV3 1341 aaKnown RBP27.68■■■□□ 2.02
CPNE7-209ENST00000568977 BRINP3Q76B58 766 aa27.67■■■□□ 2.02
CPNE7-209ENST00000568977 RAB3GAP2Q9H2M9 1393 aa27.66■■■□□ 2.02
CPNE7-209ENST00000568977 ROBO2Q9HCK4 1378 aa27.66■■■□□ 2.02
CPNE7-209ENST00000568977 RGS17Q9UGC6 210 aaPredicted RBP27.66■■■□□ 2.02
CPNE7-209ENST00000568977 SHPRHQ149N8 1683 aa27.65■■■□□ 2.02
CPNE7-209ENST00000568977 NHSL1Q5SYE7 1610 aa27.65■■■□□ 2.02
CPNE7-209ENST00000568977 ANKRD30BQ9BXX2 1392 aa27.63■■■□□ 2.01
CPNE7-209ENST00000568977 RGL3Q3MIN7 710 aa27.63■■■□□ 2.01
CPNE7-209ENST00000568977 ADGRF5Q8IZF2 1346 aa27.63■■■□□ 2.01
CPNE7-209ENST00000568977 LRP6O75581 1613 aa27.59■■■□□ 2.01
CPNE7-209ENST00000568977 PIK3C2GO75747 1445 aa27.58■■■□□ 2
CPNE7-209ENST00000568977 SPATA31A6Q5VVP1 1343 aa27.57■■■□□ 2
CPNE7-209ENST00000568977 C1orf167Q5SNV9 1468 aa27.56■■■□□ 2
CPNE7-209ENST00000568977 KNDC1Q76NI1 1749 aa27.55■■■□□ 2
CPNE7-209ENST00000568977 TECPR2O15040 1411 aa27.54■■■□□ 2
CPNE7-209ENST00000568977 CDC42BPGQ6DT37 1551 aa27.53■■■□□ 2
CPNE7-209ENST00000568977 MYOM2P54296 1465 aa27.51■■■□□ 2
CPNE7-209ENST00000568977 POTEAQ6S8J7 498 aa27.51■■□□□ 1.99
CPNE7-209ENST00000568977 LAMC1P11047 1609 aa27.51■■□□□ 1.99
CPNE7-209ENST00000568977 LRPPRCP42704 1394 aaKnown RBP27.5■■□□□ 1.99
CPNE7-209ENST00000568977 NRXN1Q9ULB1 1477 aa27.5■■□□□ 1.99
CPNE7-209ENST00000568977 DDX17Q92841 729 aaKnown RBP27.48■■□□□ 1.99
CPNE7-209ENST00000568977 MEX3CQ5U5Q3 659 aaKnown RBP27.46■■□□□ 1.99
CPNE7-209ENST00000568977 STK26Q9P289 416 aa27.46■■□□□ 1.99
CPNE7-209ENST00000568977 TMEM132EQ6IEE7 984 aa27.45■■□□□ 1.98
CPNE7-209ENST00000568977 ABCC11Q96J66 1382 aa27.45■■□□□ 1.98
CPNE7-209ENST00000568977 YTHDC2Q9H6S0 1430 aaKnown RBP27.44■■□□□ 1.98
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms