RNA–Protein interactions for RNA: ENST00000568919.1

SIN3A-212, Transcript of SIN3 transcription regulator family member A, humanhuman

TSL 2

Gene SIN3A, Length 455 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3A-212ENST00000568919 LRRC7Q96NW7 1537 aa27.26■■□□□ 1.96
SIN3A-212ENST00000568919 TOM1O60784 492 aa27.26■■□□□ 1.95
SIN3A-212ENST00000568919 ABCF1Q8NE71 845 aaKnown RBP eCLIP27.25■■□□□ 1.95
SIN3A-212ENST00000568919 SENP3Q9H4L4 574 aaPredicted RBP27.25■■□□□ 1.95
SIN3A-212ENST00000568919 PPP1R15AO75807 674 aaPredicted RBP27.24■■□□□ 1.95
SIN3A-212ENST00000568919 KCNA6P17658 529 aa27.23■■□□□ 1.95
SIN3A-212ENST00000568919 NUTM2DQ5VT03 806 aaPredicted RBP27.23■■□□□ 1.95
SIN3A-212ENST00000568919 PLEKHG1Q9ULL1 1385 aa27.22■■□□□ 1.95
SIN3A-212ENST00000568919 SPHKAPQ2M3C7 1700 aa27.22■■□□□ 1.95
SIN3A-212ENST00000568919 PIP4K2BP78356 416 aa27.2■■□□□ 1.94
SIN3A-212ENST00000568919 SLC4A1APQ9BWU0 796 aaKnown RBP27.2■■□□□ 1.94
SIN3A-212ENST00000568919 TBX22Q9Y458 520 aa27.17■■□□□ 1.94
SIN3A-212ENST00000568919 SCAF1Q9H7N4 1312 aaKnown RBP27.16■■□□□ 1.94
SIN3A-212ENST00000568919 ZNF326Q5BKZ1 582 aaKnown RBP27.14■■□□□ 1.94
SIN3A-212ENST00000568919 PROSER2Q86WR7 435 aaPredicted RBP27.13■■□□□ 1.93
SIN3A-212ENST00000568919 TRPM2O94759 1503 aa27.12■■□□□ 1.93
SIN3A-212ENST00000568919 ALKQ9UM73 1620 aa27.11■■□□□ 1.93
SIN3A-212ENST00000568919 XIRP1Q702N8 1843 aaKnown RBP27.11■■□□□ 1.93
SIN3A-212ENST00000568919 CLTCL1P53675 1640 aa27.1■■□□□ 1.93
SIN3A-212ENST00000568919 ADAMTS13Q76LX8 1427 aa27.09■■□□□ 1.93
SIN3A-212ENST00000568919 RBM33Q96EV2 1170 aaKnown RBP27.09■■□□□ 1.93
SIN3A-212ENST00000568919 TMEM94Q12767 1356 aa27.09■■□□□ 1.93
SIN3A-212ENST00000568919 FOXD1Q16676 465 aa27.08■■□□□ 1.93
SIN3A-212ENST00000568919 MPHOSPH9Q99550 1183 aa27.08■■□□□ 1.93
SIN3A-212ENST00000568919 CHD2O14647 1828 aaKnown RBP27.06■■□□□ 1.92
SIN3A-212ENST00000568919 HSPA1LP34931 641 aa27.06■■□□□ 1.92
SIN3A-212ENST00000568919 SETD5Q9C0A6 1442 aa27.06■■□□□ 1.92
SIN3A-212ENST00000568919 NWD1Q149M9 1564 aa27.05■■□□□ 1.92
SIN3A-212ENST00000568919 KIF1BO60333 1816 aa27.04■■□□□ 1.92
SIN3A-212ENST00000568919 NKTRP30414 1462 aaKnown RBP27.02■■□□□ 1.92
SIN3A-212ENST00000568919 ACIN1Q9UKV3 1341 aaKnown RBP27.02■■□□□ 1.92
SIN3A-212ENST00000568919 PIK3R4Q99570 1358 aa27■■□□□ 1.91
SIN3A-212ENST00000568919 DIP2AQ14689 1571 aa27■■□□□ 1.91
SIN3A-212ENST00000568919 NEXMIFQ5QGS0 1516 aa26.98■■□□□ 1.91
SIN3A-212ENST00000568919 AMOTL2Q9Y2J4 779 aa26.97■■□□□ 1.91
SIN3A-212ENST00000568919 RPGRIP1LQ68CZ1 1315 aa26.95■■□□□ 1.91
SIN3A-212ENST00000568919 NRXN3Q9Y4C0 1643 aa26.95■■□□□ 1.91
SIN3A-212ENST00000568919 VGFO15240 615 aaPredicted RBP26.95■■□□□ 1.9
SIN3A-212ENST00000568919 SETBP1Q9Y6X0 1596 aa26.95■■□□□ 1.9
SIN3A-212ENST00000568919 RAB3GAP2Q9H2M9 1393 aa26.95■■□□□ 1.9
SIN3A-212ENST00000568919 PTPRUQ92729 1446 aa26.94■■□□□ 1.9
SIN3A-212ENST00000568919 MSH6P52701 1360 aa26.93■■□□□ 1.9
SIN3A-212ENST00000568919 DISP3Q9P2K9 1392 aa26.93■■□□□ 1.9
SIN3A-212ENST00000568919 NCOA3Q9Y6Q9 1424 aa26.91■■□□□ 1.9
SIN3A-212ENST00000568919 METP08581 1390 aa26.91■■□□□ 1.9
SIN3A-212ENST00000568919 CCDC144AA2RUR9 1427 aa26.9■■□□□ 1.9
SIN3A-212ENST00000568919 FAM135BQ49AJ0 1406 aa26.9■■□□□ 1.9
SIN3A-212ENST00000568919 RGL3Q3MIN7 710 aa26.88■■□□□ 1.89
SIN3A-212ENST00000568919 C14orf37Q86TY3 774 aa26.88■■□□□ 1.89
SIN3A-212ENST00000568919 SLAIN2Q9P270 581 aa26.88■■□□□ 1.89
SIN3A-212ENST00000568919 C19orf44Q9H6X5 657 aa26.86■■□□□ 1.89
SIN3A-212ENST00000568919 HRCP23327 699 aa26.85■■□□□ 1.89
SIN3A-212ENST00000568919 SPATA31E1Q6ZUB1 1445 aa26.83■■□□□ 1.89
SIN3A-212ENST00000568919 PPLO60437 1756 aa26.83■■□□□ 1.89
SIN3A-212ENST00000568919 XRN1Q8IZH2 1706 aaKnown RBP26.8■■□□□ 1.88
SIN3A-212ENST00000568919 CADPS2Q86UW7 1296 aa26.8■■□□□ 1.88
SIN3A-212ENST00000568919 ADGRF5Q8IZF2 1346 aa26.8■■□□□ 1.88
SIN3A-212ENST00000568919 ATF3P18847 181 aa26.79■■□□□ 1.88
SIN3A-212ENST00000568919 ROBO1Q9Y6N7 1651 aa26.78■■□□□ 1.88
SIN3A-212ENST00000568919 SIPA1L2Q9P2F8 1722 aaPredicted RBP26.78■■□□□ 1.88
SIN3A-212ENST00000568919 ANKRD30BQ9BXX2 1392 aa26.75■■□□□ 1.87
SIN3A-212ENST00000568919 ILDR2Q71H61 639 aa26.75■■□□□ 1.87
SIN3A-212ENST00000568919 SETD1AO15047 1707 aaKnown RBP26.74■■□□□ 1.87
SIN3A-212ENST00000568919 MED1Q15648 1581 aaPredicted RBP26.7■■□□□ 1.86
SIN3A-212ENST00000568919 IFT172Q9UG01 1749 aa26.7■■□□□ 1.86
SIN3A-212ENST00000568919 ROBO2Q9HCK4 1378 aa26.68■■□□□ 1.86
SIN3A-212ENST00000568919 DCCP43146 1447 aa26.67■■□□□ 1.86
SIN3A-212ENST00000568919 PTCH1Q13635 1447 aa26.65■■□□□ 1.86
SIN3A-212ENST00000568919 ADGRL3Q9HAR2 1447 aa26.65■■□□□ 1.86
SIN3A-212ENST00000568919 TMEM132EQ6IEE7 984 aa26.64■■□□□ 1.86
SIN3A-212ENST00000568919 BRINP3Q76B58 766 aa26.64■■□□□ 1.86
SIN3A-212ENST00000568919 STK26Q9P289 416 aa26.63■■□□□ 1.85
SIN3A-212ENST00000568919 PIK3C2GO75747 1445 aa26.63■■□□□ 1.85
SIN3A-212ENST00000568919 PRAG1Q86YV5 1406 aa26.63■■□□□ 1.85
SIN3A-212ENST00000568919 PHLPP1O60346 1717 aa26.62■■□□□ 1.85
SIN3A-212ENST00000568919 C14orf93Q9H972 538 aaKnown RBP26.62■■□□□ 1.85
SIN3A-212ENST00000568919 MST1RQ04912 1400 aa26.61■■□□□ 1.85
SIN3A-212ENST00000568919 NALCNQ8IZF0 1738 aa26.59■■□□□ 1.85
SIN3A-212ENST00000568919 CFAP70Q5T0N1 1121 aa26.58■■□□□ 1.85
SIN3A-212ENST00000568919 PHF23Q9BUL5 403 aaPredicted RBP26.58■■□□□ 1.85
SIN3A-212ENST00000568919 LRPPRCP42704 1394 aaKnown RBP26.58■■□□□ 1.84
SIN3A-212ENST00000568919 NRXN1Q9ULB1 1477 aa26.57■■□□□ 1.84
SIN3A-212ENST00000568919 ABCC11Q96J66 1382 aa26.57■■□□□ 1.84
SIN3A-212ENST00000568919 WAPLQ7Z5K2 1190 aa26.56■■□□□ 1.84
SIN3A-212ENST00000568919 MYOM2P54296 1465 aa26.55■■□□□ 1.84
SIN3A-212ENST00000568919 KDM2AQ9Y2K7 1162 aa26.55■■□□□ 1.84
SIN3A-212ENST00000568919 JCADQ9P266 1359 aa26.55■■□□□ 1.84
SIN3A-212ENST00000568919 DCAF11Q8TEB1 546 aa26.54■■□□□ 1.84
SIN3A-212ENST00000568919 ASXL1Q8IXJ9 1541 aa26.54■■□□□ 1.84
SIN3A-212ENST00000568919 COL16A1Q07092 1604 aaPredicted RBP26.54■■□□□ 1.84
SIN3A-212ENST00000568919 AHDC1Q5TGY3 1603 aaPredicted RBP26.54■■□□□ 1.84
SIN3A-212ENST00000568919 TECPR2O15040 1411 aa26.53■■□□□ 1.84
SIN3A-212ENST00000568919 YTHDC2Q9H6S0 1430 aaKnown RBP26.52■■□□□ 1.84
SIN3A-212ENST00000568919 C1orf167Q5SNV9 1468 aa26.51■■□□□ 1.83
SIN3A-212ENST00000568919 SIRT1Q96EB6 747 aa26.51■■□□□ 1.83
SIN3A-212ENST00000568919 DHX57Q6P158 1386 aaKnown RBP26.49■■□□□ 1.83
SIN3A-212ENST00000568919 STAC3Q96MF2 364 aa26.49■■□□□ 1.83
SIN3A-212ENST00000568919 RGS17Q9UGC6 210 aaPredicted RBP26.49■■□□□ 1.83
SIN3A-212ENST00000568919 SOCS7O14512 581 aa26.48■■□□□ 1.83
SIN3A-212ENST00000568919 DDX17Q92841 729 aaKnown RBP26.48■■□□□ 1.83
Retrieved 100 of 20,778 RNA–protein pairs in 142.6 ms