RNA–Protein interactions for RNA: ENST00000568814.1

HERPUD1-216, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 509 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-216ENST00000568814 TONSLQ96HA7 1378 aa14.77□□□□□ -0.04
HERPUD1-216ENST00000568814 ZNF326Q5BKZ1 582 aaKnown RBP14.77□□□□□ -0.05
HERPUD1-216ENST00000568814 TIMELESSQ9UNS1 1208 aa14.77□□□□□ -0.05
HERPUD1-216ENST00000568814 ARHGAP23Q9P227 1491 aa14.76□□□□□ -0.05
HERPUD1-216ENST00000568814 TMEM2Q9UHN6 1383 aa14.76□□□□□ -0.05
HERPUD1-216ENST00000568814 HDGFP51858 240 aaKnown RBP14.76□□□□□ -0.05
HERPUD1-216ENST00000568814 STAC3Q96MF2 364 aa14.76□□□□□ -0.05
HERPUD1-216ENST00000568814 RIMS2Q9UQ26 1411 aa14.75□□□□□ -0.05
HERPUD1-216ENST00000568814 RGL3Q3MIN7 710 aa14.74□□□□□ -0.05
HERPUD1-216ENST00000568814 ABCF1Q8NE71 845 aaKnown RBP eCLIP14.74□□□□□ -0.05
HERPUD1-216ENST00000568814 NEXMIFQ5QGS0 1516 aa14.74□□□□□ -0.05
HERPUD1-216ENST00000568814 PPLO60437 1756 aa14.74□□□□□ -0.05
HERPUD1-216ENST00000568814 IFT172Q9UG01 1749 aa14.74□□□□□ -0.05
HERPUD1-216ENST00000568814 ZFYVE9O95405 1425 aa14.74□□□□□ -0.05
HERPUD1-216ENST00000568814 EID1Q9Y6B2 187 aa14.73□□□□□ -0.05
HERPUD1-216ENST00000568814 MYOM2P54296 1465 aa14.73□□□□□ -0.05
HERPUD1-216ENST00000568814 STRCQ7RTU9 1775 aa14.72□□□□□ -0.05
HERPUD1-216ENST00000568814 SCAF11Q99590 1463 aaKnown RBP14.71□□□□□ -0.05
HERPUD1-216ENST00000568814 VGFO15240 615 aaPredicted RBP14.71□□□□□ -0.05
HERPUD1-216ENST00000568814 L3MBTL2Q969R5 705 aa14.71□□□□□ -0.05
HERPUD1-216ENST00000568814 PPP1R15AO75807 674 aaPredicted RBP14.7□□□□□ -0.06
HERPUD1-216ENST00000568814 ANKLE2Q86XL3 938 aa14.7□□□□□ -0.06
HERPUD1-216ENST00000568814 POLR1AO95602 1720 aaPredicted RBP14.69□□□□□ -0.06
HERPUD1-216ENST00000568814 DCAF11Q8TEB1 546 aa14.69□□□□□ -0.06
HERPUD1-216ENST00000568814 TXNDC2Q86VQ3 553 aa14.68□□□□□ -0.06
HERPUD1-216ENST00000568814 NRXN1Q9ULB1 1477 aa14.68□□□□□ -0.06
HERPUD1-216ENST00000568814 PLEKHG1Q9ULL1 1385 aa14.67□□□□□ -0.06
HERPUD1-216ENST00000568814 MED14O60244 1454 aa14.66□□□□□ -0.06
HERPUD1-216ENST00000568814 SETBP1Q9Y6X0 1596 aa14.65□□□□□ -0.06
HERPUD1-216ENST00000568814 LTKP29376 864 aa14.65□□□□□ -0.06
HERPUD1-216ENST00000568814 ZEB1P37275 1124 aaPredicted RBP14.65□□□□□ -0.06
HERPUD1-216ENST00000568814 KDM2AQ9Y2K7 1162 aa14.65□□□□□ -0.06
HERPUD1-216ENST00000568814 PIK3C2GO75747 1445 aa14.65□□□□□ -0.06
HERPUD1-216ENST00000568814 PRAG1Q86YV5 1406 aa14.65□□□□□ -0.06
HERPUD1-216ENST00000568814 LAMC1P11047 1609 aa14.64□□□□□ -0.07
HERPUD1-216ENST00000568814 DIP2AQ14689 1571 aa14.64□□□□□ -0.07
HERPUD1-216ENST00000568814 ADGRF5Q8IZF2 1346 aa14.64□□□□□ -0.07
HERPUD1-216ENST00000568814 IQGAP1P46940 1657 aa14.63□□□□□ -0.07
HERPUD1-216ENST00000568814 NUTM2DQ5VT03 806 aaPredicted RBP14.63□□□□□ -0.07
HERPUD1-216ENST00000568814 NPHP4O75161 1426 aaPredicted RBP14.63□□□□□ -0.07
HERPUD1-216ENST00000568814 KIAA1210Q9ULL0 1709 aa14.62□□□□□ -0.07
HERPUD1-216ENST00000568814 NRXN3Q9Y4C0 1643 aa14.61□□□□□ -0.07
HERPUD1-216ENST00000568814 NCKAP5LQ9HCH0 1330 aa14.61□□□□□ -0.07
HERPUD1-216ENST00000568814 LTBP4Q8N2S1 1624 aa14.6□□□□□ -0.07
HERPUD1-216ENST00000568814 BCANQ96GW7 911 aa14.6□□□□□ -0.07
HERPUD1-216ENST00000568814 ALKQ9UM73 1620 aa14.59□□□□□ -0.07
HERPUD1-216ENST00000568814 DMRT2Q9Y5R5 561 aa14.59□□□□□ -0.07
HERPUD1-216ENST00000568814 ADAMTS13Q76LX8 1427 aa14.58□□□□□ -0.07
HERPUD1-216ENST00000568814 C14orf93Q9H972 538 aaKnown RBP14.58□□□□□ -0.08
HERPUD1-216ENST00000568814 TRPM1Q7Z4N2 1603 aa14.58□□□□□ -0.08
HERPUD1-216ENST00000568814 RALGAPBQ86X10 1494 aa14.57□□□□□ -0.08
HERPUD1-216ENST00000568814 TBX22Q9Y458 520 aa14.57□□□□□ -0.08
HERPUD1-216ENST00000568814 SETD1AO15047 1707 aaKnown RBP14.57□□□□□ -0.08
HERPUD1-216ENST00000568814 PIK3R4Q99570 1358 aa14.57□□□□□ -0.08
HERPUD1-216ENST00000568814 NBPF8Q3BBV2 869 aa14.56□□□□□ -0.08
HERPUD1-216ENST00000568814 MED1Q15648 1581 aaPredicted RBP14.56□□□□□ -0.08
HERPUD1-216ENST00000568814 CFAP70Q5T0N1 1121 aa14.54□□□□□ -0.08
HERPUD1-216ENST00000568814 SLC26A8Q96RN1 970 aa14.54□□□□□ -0.08
HERPUD1-216ENST00000568814 ROCK2O75116 1388 aaKnown RBP14.54□□□□□ -0.08
HERPUD1-216ENST00000568814 GPRASP1Q5JY77 1395 aa14.54□□□□□ -0.08
HERPUD1-216ENST00000568814 ADGRB1O14514 1584 aa14.53□□□□□ -0.08
HERPUD1-216ENST00000568814 ASXL1Q8IXJ9 1541 aa14.52□□□□□ -0.08
HERPUD1-216ENST00000568814 SENP3Q9H4L4 574 aaPredicted RBP14.52□□□□□ -0.09
HERPUD1-216ENST00000568814 IQSEC2Q5JU85 1478 aa14.51□□□□□ -0.09
HERPUD1-216ENST00000568814 METP08581 1390 aa14.51□□□□□ -0.09
HERPUD1-216ENST00000568814 NWD1Q149M9 1564 aa14.5□□□□□ -0.09
HERPUD1-216ENST00000568814 YTHDC2Q9H6S0 1430 aaKnown RBP14.49□□□□□ -0.09
HERPUD1-216ENST00000568814 LRPPRCP42704 1394 aaKnown RBP14.49□□□□□ -0.09
HERPUD1-216ENST00000568814 NBPF1Q3BBV0 1214 aa14.49□□□□□ -0.09
HERPUD1-216ENST00000568814 CHD2O14647 1828 aaKnown RBP14.49□□□□□ -0.09
HERPUD1-216ENST00000568814 KNDC1Q76NI1 1749 aa14.49□□□□□ -0.09
HERPUD1-216ENST00000568814 XRN1Q8IZH2 1706 aaKnown RBP14.49□□□□□ -0.09
HERPUD1-216ENST00000568814 TECPR2O15040 1411 aa14.49□□□□□ -0.09
HERPUD1-216ENST00000568814 ABCC11Q96J66 1382 aa14.48□□□□□ -0.09
HERPUD1-216ENST00000568814 DLC1Q96QB1 1528 aa14.48□□□□□ -0.09
HERPUD1-216ENST00000568814 TMEM132EQ6IEE7 984 aa14.48□□□□□ -0.09
HERPUD1-216ENST00000568814 CARD11Q9BXL7 1154 aa14.48□□□□□ -0.09
HERPUD1-216ENST00000568814 EIF3AQ14152 1382 aaKnown RBP14.47□□□□□ -0.09
HERPUD1-216ENST00000568814 CPS1P31327 1500 aa14.47□□□□□ -0.09
HERPUD1-216ENST00000568814 NKTRP30414 1462 aaKnown RBP14.47□□□□□ -0.09
HERPUD1-216ENST00000568814 UBAP1LF5GYI3 381 aa14.47□□□□□ -0.09
HERPUD1-216ENST00000568814 KCNA6P17658 529 aa14.47□□□□□ -0.09
HERPUD1-216ENST00000568814 PTCH1Q13635 1447 aa14.47□□□□□ -0.09
HERPUD1-216ENST00000568814 PTPRUQ92729 1446 aa14.46□□□□□ -0.09
HERPUD1-216ENST00000568814 AMOTL2Q9Y2J4 779 aa14.45□□□□□ -0.1
HERPUD1-216ENST00000568814 FAM135BQ49AJ0 1406 aa14.44□□□□□ -0.1
HERPUD1-216ENST00000568814 SIRT1Q96EB6 747 aa14.44□□□□□ -0.1
HERPUD1-216ENST00000568814 ARHGEF28Q8N1W1 1705 aaKnown RBP14.44□□□□□ -0.1
HERPUD1-216ENST00000568814 STK26Q9P289 416 aa14.43□□□□□ -0.1
HERPUD1-216ENST00000568814 USP47Q96K76 1375 aa14.43□□□□□ -0.1
HERPUD1-216ENST00000568814 TRAK1Q9UPV9 953 aa14.42□□□□□ -0.1
HERPUD1-216ENST00000568814 ZNF335Q9H4Z2 1342 aaPredicted RBP14.41□□□□□ -0.1
HERPUD1-216ENST00000568814 STRCP1A6NGW2 1772 aa14.4□□□□□ -0.1
HERPUD1-216ENST00000568814 ROBO2Q9HCK4 1378 aa14.4□□□□□ -0.1
HERPUD1-216ENST00000568814 EIF4G2P78344 907 aaKnown RBP eCLIP14.4□□□□□ -0.1
HERPUD1-216ENST00000568814 NCOA3Q9Y6Q9 1424 aa14.4□□□□□ -0.1
HERPUD1-216ENST00000568814 CENPJQ9HC77 1338 aaPredicted RBP14.4□□□□□ -0.1
HERPUD1-216ENST00000568814 HSPA1LP34931 641 aa14.39□□□□□ -0.11
HERPUD1-216ENST00000568814 POGKQ9P215 609 aa14.39□□□□□ -0.11
HERPUD1-216ENST00000568814 SCAF1Q9H7N4 1312 aaKnown RBP14.39□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 76.1 ms