RNA–Protein interactions for RNA: ENST00000568369.5

FANCA-230, Transcript of FA complementation group A, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene FANCA, Length 4,601 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-230ENST00000568369 GORABQ5T7V8 394 aa13.09□□□□□ -0.31
FANCA-230ENST00000568369 PNISRQ8TF01 805 aaKnown RBP13.08□□□□□ -0.32
FANCA-230ENST00000568369 NUTM2FA1L443 756 aa13.08□□□□□ -0.32
FANCA-230ENST00000568369 PANK1Q8TE04 598 aa13.08□□□□□ -0.32
FANCA-230ENST00000568369 C22orf23Q9BZE7 217 aa13.08□□□□□ -0.32
FANCA-230ENST00000568369 CCDC34Q96HJ3 373 aa13.08□□□□□ -0.32
FANCA-230ENST00000568369 EFCAB5A4FU69 1503 aa13.07□□□□□ -0.32
FANCA-230ENST00000568369 LTV1Q96GA3 475 aaPredicted RBP13.07□□□□□ -0.32
FANCA-230ENST00000568369 CHMP3Q9Y3E7 222 aa13.07□□□□□ -0.32
FANCA-230ENST00000568369 TIAM1Q13009 1591 aa13.07□□□□□ -0.32
FANCA-230ENST00000568369 TULP1O00294 542 aaPredicted RBP13.06□□□□□ -0.32
FANCA-230ENST00000568369 ZNF330Q9Y3S2 320 aaPredicted RBP13.06□□□□□ -0.32
FANCA-230ENST00000568369 AKNAQ7Z591 1439 aa13.06□□□□□ -0.32
FANCA-230ENST00000568369 LNPKQ9C0E8 428 aa13.06□□□□□ -0.32
FANCA-230ENST00000568369 WDR97A6NE52 1622 aa13.06□□□□□ -0.32
FANCA-230ENST00000568369 TOP2BQ02880 1626 aa13.06□□□□□ -0.32
FANCA-230ENST00000568369 ROCK1Q13464 1354 aa13.05□□□□□ -0.32
FANCA-230ENST00000568369 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.05□□□□□ -0.32
FANCA-230ENST00000568369 PPP2R1AP30153 589 aa13.05□□□□□ -0.32
FANCA-230ENST00000568369 KIAA1107Q9UPP5 1409 aa13.04□□□□□ -0.32
FANCA-230ENST00000568369 GNAI1P63096 354 aa13.04□□□□□ -0.32
FANCA-230ENST00000568369 NUCB2P80303 420 aa13.04□□□□□ -0.32
FANCA-230ENST00000568369 SMG6Q86US8 1419 aaKnown RBP13.04□□□□□ -0.32
FANCA-230ENST00000568369 TAF7LQ5H9L4 462 aa13.03□□□□□ -0.32
FANCA-230ENST00000568369 TCP11L2Q8N4U5 519 aa13.03□□□□□ -0.32
FANCA-230ENST00000568369 BACH2Q9BYV9 841 aa13.03□□□□□ -0.32
FANCA-230ENST00000568369 EHBP1L1Q8N3D4 1523 aa13.03□□□□□ -0.32
FANCA-230ENST00000568369 PDE3AQ14432 1141 aa13.03□□□□□ -0.32
FANCA-230ENST00000568369 CCDC184Q52MB2 194 aa13.03□□□□□ -0.32
FANCA-230ENST00000568369 AQRO60306 1485 aaKnown RBP eCLIP13.03□□□□□ -0.324e-7■■■■□ 25.4
FANCA-230ENST00000568369 PRDM2Q13029 1718 aa13.03□□□□□ -0.32
FANCA-230ENST00000568369 FOXD4L6Q3SYB3 417 aaPredicted RBP13.03□□□□□ -0.32
FANCA-230ENST00000568369 FOXD4L3Q6VB84 417 aaPredicted RBP13.03□□□□□ -0.32
FANCA-230ENST00000568369 SF3A1Q15459 793 aaKnown RBP13.02□□□□□ -0.32
FANCA-230ENST00000568369 INTS3Q68E01 1043 aaKnown RBP13.02□□□□□ -0.32
FANCA-230ENST00000568369 MTHFSP49914 203 aa13.02□□□□□ -0.33
FANCA-230ENST00000568369 RUFY2Q8WXA3 655 aa13.02□□□□□ -0.33
FANCA-230ENST00000568369 DIAPH3Q9NSV4 1193 aa13.02□□□□□ -0.33
FANCA-230ENST00000568369 NBPF1Q3BBV0 1214 aa13.02□□□□□ -0.33
FANCA-230ENST00000568369 CHMP4CQ96CF2 233 aa13.01□□□□□ -0.33
FANCA-230ENST00000568369 TEFQ10587 303 aa13□□□□□ -0.33
FANCA-230ENST00000568369 H3BQV1 296 aa13□□□□□ -0.33
FANCA-230ENST00000568369 ZKSCAN1P17029 563 aaPredicted RBP13□□□□□ -0.33
FANCA-230ENST00000568369 IFFO2Q5TF58 517 aa13□□□□□ -0.33
FANCA-230ENST00000568369 GGNBP2Q9H3C7 697 aa13□□□□□ -0.33
FANCA-230ENST00000568369 TRHP20396 242 aaPredicted RBP13□□□□□ -0.33
FANCA-230ENST00000568369 FAM184AQ8NB25 1140 aa13□□□□□ -0.33
FANCA-230ENST00000568369 ANO2Q9NQ90 1003 aa13□□□□□ -0.33
FANCA-230ENST00000568369 MRE11P49959 708 aa13□□□□□ -0.33
FANCA-230ENST00000568369 GOLGA6L19H0YKK7 550 aa12.99□□□□□ -0.33
FANCA-230ENST00000568369 CFAP70Q5T0N1 1121 aa12.99□□□□□ -0.33
FANCA-230ENST00000568369 GRIN2BQ13224 1484 aa12.98□□□□□ -0.33
FANCA-230ENST00000568369 BECN2A8MW95 431 aa12.98□□□□□ -0.33
FANCA-230ENST00000568369 NAIPQ13075 1403 aa12.98□□□□□ -0.33
FANCA-230ENST00000568369 FKBP5Q13451 457 aaPredicted RBP12.98□□□□□ -0.33
FANCA-230ENST00000568369 CDC45O75419 566 aa12.98□□□□□ -0.33
FANCA-230ENST00000568369 PDZRN3Q9UPQ7 1066 aa12.98□□□□□ -0.33
FANCA-230ENST00000568369 FRAT2O75474 233 aaPredicted RBP12.97□□□□□ -0.33
FANCA-230ENST00000568369 FAM43AQ8N2R8 423 aa12.97□□□□□ -0.33
FANCA-230ENST00000568369 C9orf78Q9NZ63 289 aaPredicted RBP12.97□□□□□ -0.33
FANCA-230ENST00000568369 HMOX1P09601 288 aa12.97□□□□□ -0.33
FANCA-230ENST00000568369 C1orf141Q5JVX7 400 aa12.96□□□□□ -0.33
FANCA-230ENST00000568369 ISY1Q9ULR0 285 aaKnown RBP12.96□□□□□ -0.33
FANCA-230ENST00000568369 C9orf84Q5VXU9 1444 aa12.96□□□□□ -0.33
FANCA-230ENST00000568369 SCAPERQ9BY12 1400 aa12.96□□□□□ -0.33
FANCA-230ENST00000568369 NEXNQ0ZGT2 675 aa12.96□□□□□ -0.33
FANCA-230ENST00000568369 TMEM132EQ6IEE7 984 aa12.96□□□□□ -0.33
FANCA-230ENST00000568369 TRAK2O60296 914 aa12.95□□□□□ -0.34
FANCA-230ENST00000568369 EIF2S2P20042 333 aaKnown RBP12.95□□□□□ -0.34
FANCA-230ENST00000568369 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.95□□□□□ -0.34
FANCA-230ENST00000568369 MCTP1Q6DN14 999 aa12.95□□□□□ -0.34
FANCA-230ENST00000568369 CABP2Q9NPB3 220 aa12.95□□□□□ -0.34
FANCA-230ENST00000568369 TROQ12816 1431 aaPredicted RBP12.95□□□□□ -0.34
FANCA-230ENST00000568369 BCAR3O75815 825 aa12.95□□□□□ -0.34
FANCA-230ENST00000568369 IFIT2P09913 472 aaKnown RBP12.94□□□□□ -0.34
FANCA-230ENST00000568369 EXOSC9Q06265 439 aaKnown RBP12.94□□□□□ -0.34
FANCA-230ENST00000568369 VSIG10Q8N0Z9 540 aa12.94□□□□□ -0.34
FANCA-230ENST00000568369 AFAP1Q8N556 730 aa12.94□□□□□ -0.34
FANCA-230ENST00000568369 NINLQ9Y2I6 1382 aa12.94□□□□□ -0.34
FANCA-230ENST00000568369 HSP90AB4PQ58FF6 505 aa12.94□□□□□ -0.34
FANCA-230ENST00000568369 TOMM22Q9NS69 142 aa12.94□□□□□ -0.34
FANCA-230ENST00000568369 SYNJ2O15056 1496 aa12.93□□□□□ -0.34
FANCA-230ENST00000568369 DAPK1P53355 1430 aa12.93□□□□□ -0.34
FANCA-230ENST00000568369 RNF20Q5VTR2 975 aa12.93□□□□□ -0.34
FANCA-230ENST00000568369 TSPYL4Q9UJ04 414 aa12.93□□□□□ -0.34
FANCA-230ENST00000568369 ARHGAP5Q13017 1502 aa12.93□□□□□ -0.34
FANCA-230ENST00000568369 SMC3Q9UQE7 1217 aa12.93□□□□□ -0.34
FANCA-230ENST00000568369 LRRFIP1Q32MZ4 808 aaKnown RBP12.93□□□□□ -0.34
FANCA-230ENST00000568369 NECTIN2Q92692 538 aa12.93□□□□□ -0.34
FANCA-230ENST00000568369 NASPP49321 788 aaPredicted RBP12.92□□□□□ -0.34
FANCA-230ENST00000568369 CPLX2Q6PUV4 134 aaKnown RBP12.92□□□□□ -0.34
FANCA-230ENST00000568369 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.92□□□□□ -0.34
FANCA-230ENST00000568369 RASSF8Q8NHQ8 419 aa12.92□□□□□ -0.34
FANCA-230ENST00000568369 SUPT6HQ7KZ85 1726 aaKnown RBP12.92□□□□□ -0.34
FANCA-230ENST00000568369 CT47B1P0C2W7 299 aaPredicted RBP12.92□□□□□ -0.34
FANCA-230ENST00000568369 TPM3P06753 285 aa12.91□□□□□ -0.34
FANCA-230ENST00000568369 BRPF3Q9ULD4 1205 aa12.91□□□□□ -0.34
FANCA-230ENST00000568369 PRG4Q92954 1404 aaPredicted RBP12.91□□□□□ -0.34
FANCA-230ENST00000568369 WDR63Q8IWG1 891 aa12.91□□□□□ -0.34
FANCA-230ENST00000568369 GCC1Q96CN9 775 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms