RNA–Protein interactions for RNA: ENST00000568301.1

COMMD4-223, Transcript of COMM domain containing 4, humanhuman

TSL 5

Gene COMMD4, Length 666 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-223ENST00000568301 ANKRD50Q9ULJ7 1429 aa23.3■■□□□ 1.32
COMMD4-223ENST00000568301 BCANQ96GW7 911 aa23.29■■□□□ 1.32
COMMD4-223ENST00000568301 RPRD2Q5VT52 1461 aaKnown RBP23.28■■□□□ 1.32
COMMD4-223ENST00000568301 NWD1Q149M9 1564 aa23.27■■□□□ 1.32
COMMD4-223ENST00000568301 NKTRP30414 1462 aaKnown RBP23.26■■□□□ 1.31
COMMD4-223ENST00000568301 MSH6P52701 1360 aa23.24■■□□□ 1.31
COMMD4-223ENST00000568301 SLAIN2Q9P270 581 aa23.23■■□□□ 1.31
COMMD4-223ENST00000568301 MYO5BQ9ULV0 1848 aa23.23■■□□□ 1.31
COMMD4-223ENST00000568301 ZFYVE9O95405 1425 aa23.22■■□□□ 1.31
COMMD4-223ENST00000568301 CHD2O14647 1828 aaKnown RBP23.2■■□□□ 1.3
COMMD4-223ENST00000568301 HDGFP51858 240 aaKnown RBP23.2■■□□□ 1.3
COMMD4-223ENST00000568301 PLEKHG1Q9ULL1 1385 aa23.19■■□□□ 1.3
COMMD4-223ENST00000568301 PHLPP1O60346 1717 aa23.19■■□□□ 1.3
COMMD4-223ENST00000568301 RIMS2Q9UQ26 1411 aa23.18■■□□□ 1.3
COMMD4-223ENST00000568301 PPP1R15AO75807 674 aaPredicted RBP23.18■■□□□ 1.3
COMMD4-223ENST00000568301 GCC2Q8IWJ2 1684 aa23.18■■□□□ 1.3
COMMD4-223ENST00000568301 ROCK1Q13464 1354 aa23.16■■□□□ 1.3
COMMD4-223ENST00000568301 TMEM131LA2VDJ0 1609 aa23.16■■□□□ 1.3
COMMD4-223ENST00000568301 UNC13BO14795 1591 aa23.16■■□□□ 1.3
COMMD4-223ENST00000568301 JCADQ9P266 1359 aa23.14■■□□□ 1.3
COMMD4-223ENST00000568301 TBX22Q9Y458 520 aa23.13■■□□□ 1.29
COMMD4-223ENST00000568301 CHGAP10645 457 aaKnown RBP23.12■■□□□ 1.29
COMMD4-223ENST00000568301 NUTM2DQ5VT03 806 aaPredicted RBP23.12■■□□□ 1.29
COMMD4-223ENST00000568301 COL16A1Q07092 1604 aaPredicted RBP23.11■■□□□ 1.29
COMMD4-223ENST00000568301 SETD1AO15047 1707 aaKnown RBP23.11■■□□□ 1.29
COMMD4-223ENST00000568301 E9PCH4 1651 aa23.1■■□□□ 1.29
COMMD4-223ENST00000568301 ABCF1Q8NE71 845 aaKnown RBP eCLIP23.1■■□□□ 1.29
COMMD4-223ENST00000568301 ADAMTS13Q76LX8 1427 aa23.08■■□□□ 1.29
COMMD4-223ENST00000568301 NCOA3Q9Y6Q9 1424 aa23.08■■□□□ 1.29
COMMD4-223ENST00000568301 IQGAP3Q86VI3 1631 aa23.08■■□□□ 1.29
COMMD4-223ENST00000568301 C14orf37Q86TY3 774 aa23.08■■□□□ 1.29
COMMD4-223ENST00000568301 SIPA1L2Q9P2F8 1722 aaPredicted RBP23.06■■□□□ 1.28
COMMD4-223ENST00000568301 LRP6O75581 1613 aa23.05■■□□□ 1.28
COMMD4-223ENST00000568301 NUP155O75694 1391 aa23.04■■□□□ 1.28
COMMD4-223ENST00000568301 CADPS2Q86UW7 1296 aa23.04■■□□□ 1.28
COMMD4-223ENST00000568301 C19orf44Q9H6X5 657 aa23.04■■□□□ 1.28
COMMD4-223ENST00000568301 ATF3P18847 181 aa23.03■■□□□ 1.28
COMMD4-223ENST00000568301 DIP2AQ14689 1571 aa23.02■■□□□ 1.28
COMMD4-223ENST00000568301 SPATA31A6Q5VVP1 1343 aa23.02■■□□□ 1.28
COMMD4-223ENST00000568301 PIK3R4Q99570 1358 aa23.01■■□□□ 1.27
COMMD4-223ENST00000568301 ITGAEP38570 1179 aa23.01■■□□□ 1.27
COMMD4-223ENST00000568301 AHDC1Q5TGY3 1603 aaPredicted RBP23■■□□□ 1.27
COMMD4-223ENST00000568301 MEX3CQ5U5Q3 659 aaKnown RBP23■■□□□ 1.27
COMMD4-223ENST00000568301 AMOTL2Q9Y2J4 779 aa23■■□□□ 1.27
COMMD4-223ENST00000568301 PTPRUQ92729 1446 aa22.99■■□□□ 1.27
COMMD4-223ENST00000568301 SHPRHQ149N8 1683 aa22.97■■□□□ 1.27
COMMD4-223ENST00000568301 TRPM2O94759 1503 aa22.97■■□□□ 1.27
COMMD4-223ENST00000568301 ZNF772Q68DY9 489 aaPredicted RBP22.96■■□□□ 1.27
COMMD4-223ENST00000568301 BRINP3Q76B58 766 aa22.96■■□□□ 1.27
COMMD4-223ENST00000568301 TRIM52Q96A61 297 aa22.95■■□□□ 1.26
COMMD4-223ENST00000568301 PPARGC1BQ86YN6 1023 aaKnown RBP22.94■■□□□ 1.26
COMMD4-223ENST00000568301 UPF1Q92900 1129 aaKnown RBP eCLIP22.92■■□□□ 1.26
COMMD4-223ENST00000568301 NUTM2BA6NNL0 878 aaPredicted RBP22.91■■□□□ 1.26
COMMD4-223ENST00000568301 NUTM2EB1AL46 878 aaPredicted RBP22.91■■□□□ 1.26
COMMD4-223ENST00000568301 NUTM2AQ8IVF1 878 aaPredicted RBP22.91■■□□□ 1.26
COMMD4-223ENST00000568301 SPHKAPQ2M3C7 1700 aa22.91■■□□□ 1.26
COMMD4-223ENST00000568301 NRXN3Q9Y4C0 1643 aa22.9■■□□□ 1.26
COMMD4-223ENST00000568301 DCCP43146 1447 aa22.89■■□□□ 1.25
COMMD4-223ENST00000568301 XRN1Q8IZH2 1706 aaKnown RBP22.88■■□□□ 1.25
COMMD4-223ENST00000568301 RXRBP28702 533 aa22.88■■□□□ 1.25
COMMD4-223ENST00000568301 ASXL1Q8IXJ9 1541 aa22.87■■□□□ 1.25
COMMD4-223ENST00000568301 SETBP1Q9Y6X0 1596 aa22.86■■□□□ 1.25
COMMD4-223ENST00000568301 MST1RQ04912 1400 aa22.86■■□□□ 1.25
COMMD4-223ENST00000568301 METP08581 1390 aa22.86■■□□□ 1.25
COMMD4-223ENST00000568301 ZNF326Q5BKZ1 582 aaKnown RBP22.85■■□□□ 1.25
COMMD4-223ENST00000568301 SETD5Q9C0A6 1442 aa22.84■■□□□ 1.25
COMMD4-223ENST00000568301 AFF2P51816 1311 aa22.83■■□□□ 1.25
COMMD4-223ENST00000568301 RRBP1Q9P2E9 1410 aaKnown RBP22.83■■□□□ 1.25
COMMD4-223ENST00000568301 NHSL1Q5SYE7 1610 aa22.83■■□□□ 1.25
COMMD4-223ENST00000568301 DDX17Q92841 729 aaKnown RBP22.82■■□□□ 1.24
COMMD4-223ENST00000568301 LRRC59Q96AG4 307 aaKnown RBP22.8■■□□□ 1.24
COMMD4-223ENST00000568301 NAIPQ13075 1403 aa22.8■■□□□ 1.24
COMMD4-223ENST00000568301 CDK12Q9NYV4 1490 aaPredicted RBP22.79■■□□□ 1.24
COMMD4-223ENST00000568301 CLTCL1P53675 1640 aa22.78■■□□□ 1.24
COMMD4-223ENST00000568301 ADGRL3Q9HAR2 1447 aa22.77■■□□□ 1.24
COMMD4-223ENST00000568301 C8orf37Q96NL8 207 aa22.77■■□□□ 1.24
COMMD4-223ENST00000568301 KIF1BO60333 1816 aa22.77■■□□□ 1.24
COMMD4-223ENST00000568301 SRCAPQ6ZRS2 3230 aa22.76■■□□□ 1.23
COMMD4-223ENST00000568301 NALCNQ8IZF0 1738 aa22.76■■□□□ 1.23
COMMD4-223ENST00000568301 NEXMIFQ5QGS0 1516 aa22.76■■□□□ 1.23
COMMD4-223ENST00000568301 PNPLA6Q8IY17 1366 aa22.76■■□□□ 1.23
COMMD4-223ENST00000568301 QTRT2Q9H974 415 aaKnown RBP22.75■■□□□ 1.23
COMMD4-223ENST00000568301 VGFO15240 615 aaPredicted RBP22.71■■□□□ 1.23
COMMD4-223ENST00000568301 RGS12O14924 1447 aa22.71■■□□□ 1.23
COMMD4-223ENST00000568301 RBM6P78332 1123 aaKnown RBP22.7■■□□□ 1.22
COMMD4-223ENST00000568301 HFM1A2PYH4 1435 aa22.7■■□□□ 1.22
COMMD4-223ENST00000568301 C1orf167Q5SNV9 1468 aa22.7■■□□□ 1.22
COMMD4-223ENST00000568301 ADAMTS2O95450 1211 aa22.69■■□□□ 1.22
COMMD4-223ENST00000568301 RPGRIP1LQ68CZ1 1315 aa22.68■■□□□ 1.22
COMMD4-223ENST00000568301 NGLY1Q96IV0 654 aa22.67■■□□□ 1.22
COMMD4-223ENST00000568301 ORAI2Q96SN7 254 aa22.67■■□□□ 1.22
COMMD4-223ENST00000568301 ROBO2Q9HCK4 1378 aa22.66■■□□□ 1.22
COMMD4-223ENST00000568301 SLC4A1APQ9BWU0 796 aaKnown RBP22.66■■□□□ 1.22
COMMD4-223ENST00000568301 PTCH1Q13635 1447 aa22.65■■□□□ 1.22
COMMD4-223ENST00000568301 LAMC1P11047 1609 aa22.64■■□□□ 1.22
COMMD4-223ENST00000568301 SOS2Q07890 1332 aaPredicted RBP22.64■■□□□ 1.22
COMMD4-223ENST00000568301 EP400Q96L91 3159 aa22.61■■□□□ 1.21
COMMD4-223ENST00000568301 PRAG1Q86YV5 1406 aa22.6■■□□□ 1.21
COMMD4-223ENST00000568301 PPLO60437 1756 aa22.59■■□□□ 1.21
COMMD4-223ENST00000568301 USP21Q9UK80 565 aa22.59■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms