RNA–Protein interactions for RNA: ENST00000568153.1

CAPN3-218, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 598 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-218ENST00000568153 LAPTM4BQ86VI4 370 aa9.76□□□□□ -0.85
CAPN3-218ENST00000568153 CUX1P39880 1505 aa9.76□□□□□ -0.85
CAPN3-218ENST00000568153 UBTFP17480 764 aaKnown RBP9.75□□□□□ -0.85
CAPN3-218ENST00000568153 KCTD12Q96CX2 325 aaKnown RBP9.75□□□□□ -0.85
CAPN3-218ENST00000568153 SEPT9Q9UHD8 586 aaPredicted RBP9.75□□□□□ -0.85
CAPN3-218ENST00000568153 RUSC2Q8N2Y8 1516 aa9.75□□□□□ -0.85
CAPN3-218ENST00000568153 FECHP22830 423 aa9.74□□□□□ -0.85
CAPN3-218ENST00000568153 HIC1Q14526 733 aa9.74□□□□□ -0.85
CAPN3-218ENST00000568153 PACS2Q86VP3 889 aa9.74□□□□□ -0.85
CAPN3-218ENST00000568153 GNPATO15228 680 aa9.73□□□□□ -0.85
CAPN3-218ENST00000568153 PADI6Q6TGC4 694 aa9.73□□□□□ -0.85
CAPN3-218ENST00000568153 FAM98CQ17RN3 349 aaKnown RBP9.72□□□□□ -0.85
CAPN3-218ENST00000568153 BARGINQ6ZT62 677 aa9.72□□□□□ -0.85
CAPN3-218ENST00000568153 CEP164Q9UPV0 1460 aa9.72□□□□□ -0.85
CAPN3-218ENST00000568153 GOLGA8CPA6NN73 597 aa9.71□□□□□ -0.86
CAPN3-218ENST00000568153 THSD4Q6ZMP0 1018 aa9.71□□□□□ -0.86
CAPN3-218ENST00000568153 WNT2BQ93097 391 aa9.71□□□□□ -0.86
CAPN3-218ENST00000568153 ZFRQ96KR1 1074 aaKnown RBP9.71□□□□□ -0.86
CAPN3-218ENST00000568153 KIF27Q86VH2 1401 aa9.71□□□□□ -0.86
CAPN3-218ENST00000568153 NBPF26B4DH59 902 aa9.7□□□□□ -0.86
CAPN3-218ENST00000568153 SMAPO00193 183 aa9.7□□□□□ -0.86
CAPN3-218ENST00000568153 TATDN2Q93075 761 aa9.7□□□□□ -0.86
CAPN3-218ENST00000568153 HCSTQ9UBK5 93 aa9.7□□□□□ -0.86
CAPN3-218ENST00000568153 BIVM-ERCC5R4GMW8 1640 aa9.7□□□□□ -0.86
CAPN3-218ENST00000568153 TNIKQ9UKE5 1360 aa9.68□□□□□ -0.86
CAPN3-218ENST00000568153 NUDT18Q6ZVK8 323 aa9.68□□□□□ -0.86
CAPN3-218ENST00000568153 ANKK1Q8NFD2 765 aa9.68□□□□□ -0.86
CAPN3-218ENST00000568153 PNMA3Q9UL41 463 aa9.68□□□□□ -0.86
CAPN3-218ENST00000568153 TOPBP1Q92547 1522 aa9.67□□□□□ -0.86
CAPN3-218ENST00000568153 IGF1RP08069 1367 aa9.67□□□□□ -0.86
CAPN3-218ENST00000568153 SLC24A3Q9HC58 644 aa9.67□□□□□ -0.86
CAPN3-218ENST00000568153 FGD5Q6ZNL6 1462 aa9.66□□□□□ -0.86
CAPN3-218ENST00000568153 PRDM2Q13029 1718 aa9.66□□□□□ -0.86
CAPN3-218ENST00000568153 SOWAHBA6NEL2 793 aa9.66□□□□□ -0.86
CAPN3-218ENST00000568153 MAP2K5Q13163 448 aa9.66□□□□□ -0.86
CAPN3-218ENST00000568153 BCAMP50895 628 aa9.65□□□□□ -0.86
CAPN3-218ENST00000568153 KRI1Q8N9T8 703 aaKnown RBP9.65□□□□□ -0.86
CAPN3-218ENST00000568153 EYA1Q99502 592 aa9.65□□□□□ -0.86
CAPN3-218ENST00000568153 DNMBPQ6XZF7 1577 aa9.65□□□□□ -0.86
CAPN3-218ENST00000568153 CUX2O14529 1486 aa9.65□□□□□ -0.87
CAPN3-218ENST00000568153 MINK1Q8N4C8 1332 aaPredicted RBP9.64□□□□□ -0.87
CAPN3-218ENST00000568153 PTPN5P54829 565 aa9.64□□□□□ -0.87
CAPN3-218ENST00000568153 FAM161AQ3B820 660 aa9.64□□□□□ -0.87
CAPN3-218ENST00000568153 ADGRG1Q9Y653 693 aa9.64□□□□□ -0.87
CAPN3-218ENST00000568153 URB2Q14146 1524 aaKnown RBP9.64□□□□□ -0.87
CAPN3-218ENST00000568153 IRF6O14896 467 aa9.63□□□□□ -0.87
CAPN3-218ENST00000568153 GOLGA3Q08378 1498 aa9.63□□□□□ -0.87
CAPN3-218ENST00000568153 RAD54L2Q9Y4B4 1467 aa9.63□□□□□ -0.87
CAPN3-218ENST00000568153 POLA1P09884 1462 aaPredicted RBP9.62□□□□□ -0.87
CAPN3-218ENST00000568153 CCDC102AQ96A19 550 aa9.62□□□□□ -0.87
CAPN3-218ENST00000568153 CARMIL1Q5VZK9 1371 aa9.62□□□□□ -0.87
CAPN3-218ENST00000568153 ERCC6Q03468 1493 aa9.61□□□□□ -0.87
CAPN3-218ENST00000568153 MRC2Q9UBG0 1479 aa9.61□□□□□ -0.87
CAPN3-218ENST00000568153 SAMD7Q7Z3H4 446 aa9.61□□□□□ -0.87
CAPN3-218ENST00000568153 LRCH3Q96II8 777 aa9.61□□□□□ -0.87
CAPN3-218ENST00000568153 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.61□□□□□ -0.87
CAPN3-218ENST00000568153 PRXQ9BXM0 1461 aa9.6□□□□□ -0.87
CAPN3-218ENST00000568153 ABCA10Q8WWZ4 1543 aa9.6□□□□□ -0.87
CAPN3-218ENST00000568153 TDRD9Q8NDG6 1382 aaKnown RBP9.6□□□□□ -0.87
CAPN3-218ENST00000568153 AK7Q96M32 723 aa9.59□□□□□ -0.87
CAPN3-218ENST00000568153 RBM46Q8TBY0 533 aaKnown RBP9.58□□□□□ -0.88
CAPN3-218ENST00000568153 WBP1LQ9NX94 342 aa9.58□□□□□ -0.88
CAPN3-218ENST00000568153 RAPGEF2Q9Y4G8 1499 aa9.58□□□□□ -0.88
CAPN3-218ENST00000568153 RANGAP1P46060 587 aaPredicted RBP9.57□□□□□ -0.88
CAPN3-218ENST00000568153 METTL3Q86U44 580 aaKnown RBP9.57□□□□□ -0.88
CAPN3-218ENST00000568153 PHOX2BQ99453 314 aa9.57□□□□□ -0.88
CAPN3-218ENST00000568153 TSR3Q9UJK0 312 aaKnown RBP9.57□□□□□ -0.88
CAPN3-218ENST00000568153 HPS5Q9UPZ3 1129 aa9.57□□□□□ -0.88
CAPN3-218ENST00000568153 CEP162Q5TB80 1403 aa9.56□□□□□ -0.88
CAPN3-218ENST00000568153 TRIM66O15016 1216 aa9.56□□□□□ -0.88
CAPN3-218ENST00000568153 OATP04181 439 aa9.56□□□□□ -0.88
CAPN3-218ENST00000568153 SWT1Q5T5J6 900 aaKnown RBP9.56□□□□□ -0.88
CAPN3-218ENST00000568153 PXYLP1Q8TE99 480 aa9.56□□□□□ -0.88
CAPN3-218ENST00000568153 KIF21BO75037 1637 aa9.56□□□□□ -0.88
CAPN3-218ENST00000568153 DNAJB2P25686 324 aa9.55□□□□□ -0.88
CAPN3-218ENST00000568153 RCCD1A6NED2 376 aa9.54□□□□□ -0.88
CAPN3-218ENST00000568153 NYAP1Q6ZVC0 841 aa9.54□□□□□ -0.88
CAPN3-218ENST00000568153 TMEM134Q9H6X4 195 aa9.54□□□□□ -0.88
CAPN3-218ENST00000568153 KIF21AQ7Z4S6 1674 aa9.54□□□□□ -0.88
CAPN3-218ENST00000568153 ERICH3Q5RHP9 1530 aa9.53□□□□□ -0.88
CAPN3-218ENST00000568153 NLRP7Q8WX94 980 aa9.53□□□□□ -0.88
CAPN3-218ENST00000568153 GAPVD1Q14C86 1478 aa9.53□□□□□ -0.88
CAPN3-218ENST00000568153 IFT140Q96RY7 1462 aa9.53□□□□□ -0.88
CAPN3-218ENST00000568153 CLIP1P30622 1438 aa9.52□□□□□ -0.89
CAPN3-218ENST00000568153 TRIM26Q12899 539 aaPredicted RBP9.52□□□□□ -0.89
CAPN3-218ENST00000568153 PLA2G2EQ9NZK7 142 aa9.52□□□□□ -0.89
CAPN3-218ENST00000568153 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.51□□□□□ -0.89
CAPN3-218ENST00000568153 HDGFP51858 240 aaKnown RBP9.51□□□□□ -0.89
CAPN3-218ENST00000568153 PPP4CP60510 307 aa9.51□□□□□ -0.89
CAPN3-218ENST00000568153 AMHR2Q16671 573 aa9.51□□□□□ -0.89
CAPN3-218ENST00000568153 AQRO60306 1485 aaKnown RBP eCLIP9.51□□□□□ -0.89
CAPN3-218ENST00000568153 PDE4DQ08499 809 aa9.5□□□□□ -0.89
CAPN3-218ENST00000568153 SLF2Q8IX21 1173 aa9.5□□□□□ -0.89
CAPN3-218ENST00000568153 WDR62O43379 1518 aa9.5□□□□□ -0.89
CAPN3-218ENST00000568153 RNF40O75150 1001 aa9.49□□□□□ -0.89
CAPN3-218ENST00000568153 PCGF6Q9BYE7 350 aa9.49□□□□□ -0.89
CAPN3-218ENST00000568153 MDM2Q00987 491 aaPredicted RBP9.48□□□□□ -0.89
CAPN3-218ENST00000568153 REPIN1Q9BWE0 567 aaKnown RBP9.48□□□□□ -0.89
CAPN3-218ENST00000568153 PPARGC1BQ86YN6 1023 aaKnown RBP9.47□□□□□ -0.89
CAPN3-218ENST00000568153 TARBP1Q13395 1621 aaKnown RBP9.46□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms