RNA–Protein interactions for RNA: ENST00000567999.5

DEF8-221, Transcript of differentially expressed in FDCP 8 homolog, human

TSL 1 (best)

Gene DEF8, Length 578 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DEF8-221	ENST00000567999	IQSEC2	Q5JU85	1478 aa		32.46	■■■□□ 2.79
DEF8-221	ENST00000567999	CPS1	P31327	1500 aa		32.46	■■■□□ 2.79
DEF8-221	ENST00000567999	FOXD1	Q16676	465 aa		32.41	■■■□□ 2.78
DEF8-221	ENST00000567999	NUTM2D	Q5VT03	806 aa	Predicted RBP	32.41	■■■□□ 2.78
DEF8-221	ENST00000567999	RAB3GAP2	Q9H2M9	1393 aa		32.39	■■■□□ 2.78
DEF8-221	ENST00000567999	SLC26A8	Q96RN1	970 aa		32.38	■■■□□ 2.77
DEF8-221	ENST00000567999	PPP1R15A	O75807	674 aa	Predicted RBP	32.37	■■■□□ 2.77
DEF8-221	ENST00000567999	KIF1B	O60333	1816 aa		32.37	■■■□□ 2.77
DEF8-221	ENST00000567999	PLEKHG1	Q9ULL1	1385 aa		32.36	■■■□□ 2.77
DEF8-221	ENST00000567999	MPHOSPH9	Q99550	1183 aa		32.34	■■■□□ 2.77
DEF8-221	ENST00000567999	LRRC7	Q96NW7	1537 aa		32.33	■■■□□ 2.77
DEF8-221	ENST00000567999	BCAN	Q96GW7	911 aa		32.33	■■■□□ 2.77
DEF8-221	ENST00000567999	ABCF1	Q8NE71	845 aa	Known RBP eCLIP	32.3	■■■□□ 2.76
DEF8-221	ENST00000567999	HDGF	P51858	240 aa	Known RBP	32.29	■■■□□ 2.76
DEF8-221	ENST00000567999	ZNF326	Q5BKZ1	582 aa	Known RBP	32.29	■■■□□ 2.76
DEF8-221	ENST00000567999	NEXMIF	Q5QGS0	1516 aa		32.29	■■■□□ 2.76
DEF8-221	ENST00000567999	XIRP1	Q702N8	1843 aa	Known RBP	32.26	■■■□□ 2.76
DEF8-221	ENST00000567999	ADAMTS13	Q76LX8	1427 aa		32.26	■■■□□ 2.75
DEF8-221	ENST00000567999	NWD1	Q149M9	1564 aa		32.25	■■■□□ 2.75
DEF8-221	ENST00000567999	UBAP1L	F5GYI3	381 aa		32.25	■■■□□ 2.75
DEF8-221	ENST00000567999	NRXN3	Q9Y4C0	1643 aa		32.24	■■■□□ 2.75
DEF8-221	ENST00000567999	DIP2A	Q14689	1571 aa		32.21	■■■□□ 2.75
DEF8-221	ENST00000567999	CHD2	O14647	1828 aa	Known RBP	32.21	■■■□□ 2.75
DEF8-221	ENST00000567999	ALK	Q9UM73	1620 aa		32.2	■■■□□ 2.75
DEF8-221	ENST00000567999	CCDC144A	A2RUR9	1427 aa		32.19	■■■□□ 2.74
DEF8-221	ENST00000567999	KCNA6	P17658	529 aa		32.19	■■■□□ 2.74
DEF8-221	ENST00000567999	SETBP1	Q9Y6X0	1596 aa		32.19	■■■□□ 2.74
DEF8-221	ENST00000567999	ACIN1	Q9UKV3	1341 aa	Known RBP	32.18	■■■□□ 2.74
DEF8-221	ENST00000567999	PPL	O60437	1756 aa		32.16	■■■□□ 2.74
DEF8-221	ENST00000567999	TBX22	Q9Y458	520 aa		32.15	■■■□□ 2.74
DEF8-221	ENST00000567999	NKTR	P30414	1462 aa	Known RBP	32.15	■■■□□ 2.74
DEF8-221	ENST00000567999	RBM33	Q96EV2	1170 aa	Known RBP	32.14	■■■□□ 2.74
DEF8-221	ENST00000567999	TMEM94	Q12767	1356 aa		32.12	■■■□□ 2.73
DEF8-221	ENST00000567999	SPATA31E1	Q6ZUB1	1445 aa		32.1	■■■□□ 2.73
DEF8-221	ENST00000567999	PIP4K2B	P78356	416 aa		32.09	■■■□□ 2.73
DEF8-221	ENST00000567999	PTPRU	Q92729	1446 aa		32.09	■■■□□ 2.73
DEF8-221	ENST00000567999	PROSER2	Q86WR7	435 aa	Predicted RBP	32.08	■■■□□ 2.73
DEF8-221	ENST00000567999	SCAF1	Q9H7N4	1312 aa	Known RBP	32.07	■■■□□ 2.72
DEF8-221	ENST00000567999	IFT172	Q9UG01	1749 aa		32.07	■■■□□ 2.72
DEF8-221	ENST00000567999	TOM1	O60784	492 aa		32.07	■■■□□ 2.72
DEF8-221	ENST00000567999	HRC	P23327	699 aa		32.05	■■■□□ 2.72
DEF8-221	ENST00000567999	SETD1A	O15047	1707 aa	Known RBP	32.05	■■■□□ 2.72
DEF8-221	ENST00000567999	PIK3R4	Q99570	1358 aa		32.05	■■■□□ 2.72
DEF8-221	ENST00000567999	RGL3	Q3MIN7	710 aa		32.04	■■■□□ 2.72
DEF8-221	ENST00000567999	MET	P08581	1390 aa		32.04	■■■□□ 2.72
DEF8-221	ENST00000567999	XRN1	Q8IZH2	1706 aa	Known RBP	32.03	■■■□□ 2.72
DEF8-221	ENST00000567999	RPGRIP1L	Q68CZ1	1315 aa		32.03	■■■□□ 2.72
DEF8-221	ENST00000567999	VGF	O15240	615 aa	Predicted RBP	32	■■■□□ 2.71
DEF8-221	ENST00000567999	ANKRD30B	Q9BXX2	1392 aa		31.99	■■■□□ 2.71
DEF8-221	ENST00000567999	AMOTL2	Q9Y2J4	779 aa		31.98	■■■□□ 2.71
DEF8-221	ENST00000567999	ADGRF5	Q8IZF2	1346 aa		31.96	■■■□□ 2.71
DEF8-221	ENST00000567999	MSH6	P52701	1360 aa		31.91	■■■□□ 2.7
DEF8-221	ENST00000567999	HSPA1L	P34931	641 aa		31.9	■■■□□ 2.7
DEF8-221	ENST00000567999	SIPA1L2	Q9P2F8	1722 aa	Predicted RBP	31.87	■■■□□ 2.69
DEF8-221	ENST00000567999	PIK3C2G	O75747	1445 aa		31.85	■■■□□ 2.69
DEF8-221	ENST00000567999	C14orf37	Q86TY3	774 aa		31.85	■■■□□ 2.69
DEF8-221	ENST00000567999	NCOA3	Q9Y6Q9	1424 aa		31.84	■■■□□ 2.69
DEF8-221	ENST00000567999	ROBO1	Q9Y6N7	1651 aa		31.83	■■■□□ 2.69
DEF8-221	ENST00000567999	ASXL1	Q8IXJ9	1541 aa		31.83	■■■□□ 2.69
DEF8-221	ENST00000567999	MYOM2	P54296	1465 aa		31.82	■■■□□ 2.68
DEF8-221	ENST00000567999	NALCN	Q8IZF0	1738 aa		31.8	■■■□□ 2.68
DEF8-221	ENST00000567999	NRXN1	Q9ULB1	1477 aa		31.8	■■■□□ 2.68
DEF8-221	ENST00000567999	ROBO2	Q9HCK4	1378 aa		31.79	■■■□□ 2.68
DEF8-221	ENST00000567999	PTCH1	Q13635	1447 aa		31.78	■■■□□ 2.68
DEF8-221	ENST00000567999	FAM135B	Q49AJ0	1406 aa		31.76	■■■□□ 2.68
DEF8-221	ENST00000567999	C19orf44	Q9H6X5	657 aa		31.76	■■■□□ 2.67
DEF8-221	ENST00000567999	PRAG1	Q86YV5	1406 aa		31.75	■■■□□ 2.67
DEF8-221	ENST00000567999	SLAIN2	Q9P270	581 aa		31.74	■■■□□ 2.67
DEF8-221	ENST00000567999	TMEM132E	Q6IEE7	984 aa		31.72	■■■□□ 2.67
DEF8-221	ENST00000567999	ADGRL3	Q9HAR2	1447 aa		31.72	■■■□□ 2.67
DEF8-221	ENST00000567999	LAMC1	P11047	1609 aa		31.71	■■■□□ 2.67
DEF8-221	ENST00000567999	TRIM26	Q12899	539 aa	Predicted RBP	31.71	■■■□□ 2.67
DEF8-221	ENST00000567999	ATF3	P18847	181 aa		31.7	■■■□□ 2.67
DEF8-221	ENST00000567999	DHX57	Q6P158	1386 aa	Known RBP	31.69	■■■□□ 2.66
DEF8-221	ENST00000567999	DCC	P43146	1447 aa		31.69	■■■□□ 2.66
DEF8-221	ENST00000567999	CADPS2	Q86UW7	1296 aa		31.69	■■■□□ 2.66
DEF8-221	ENST00000567999	STK26	Q9P289	416 aa		31.69	■■■□□ 2.66
DEF8-221	ENST00000567999	KNDC1	Q76NI1	1749 aa		31.69	■■■□□ 2.66
DEF8-221	ENST00000567999	CFAP70	Q5T0N1	1121 aa		31.68	■■■□□ 2.66
DEF8-221	ENST00000567999	KDM2A	Q9Y2K7	1162 aa		31.68	■■■□□ 2.66
DEF8-221	ENST00000567999	DCAF11	Q8TEB1	546 aa		31.67	■■■□□ 2.66
DEF8-221	ENST00000567999	LRPPRC	P42704	1394 aa	Known RBP	31.67	■■■□□ 2.66
DEF8-221	ENST00000567999	C14orf93	Q9H972	538 aa	Known RBP	31.66	■■■□□ 2.66
DEF8-221	ENST00000567999	TECPR2	O15040	1411 aa		31.65	■■■□□ 2.66
DEF8-221	ENST00000567999	YTHDC2	Q9H6S0	1430 aa	Known RBP	31.65	■■■□□ 2.66
DEF8-221	ENST00000567999	MST1R	Q04912	1400 aa		31.64	■■■□□ 2.66
DEF8-221	ENST00000567999	PHLPP1	O60346	1717 aa		31.63	■■■□□ 2.65
DEF8-221	ENST00000567999	ABCC11	Q96J66	1382 aa		31.59	■■■□□ 2.65
DEF8-221	ENST00000567999	PLEKHH1	Q9ULM0	1364 aa		31.59	■■■□□ 2.65
DEF8-221	ENST00000567999	ADGRB1	O14514	1584 aa		31.59	■■■□□ 2.65
DEF8-221	ENST00000567999	MED1	Q15648	1581 aa	Predicted RBP	31.59	■■■□□ 2.65
DEF8-221	ENST00000567999	WAPL	Q7Z5K2	1190 aa		31.58	■■■□□ 2.65
DEF8-221	ENST00000567999	DISP3	Q9P2K9	1392 aa		31.57	■■■□□ 2.64
DEF8-221	ENST00000567999	COL16A1	Q07092	1604 aa	Predicted RBP	31.56	■■■□□ 2.64
DEF8-221	ENST00000567999	BRINP3	Q76B58	766 aa		31.55	■■■□□ 2.64
DEF8-221	ENST00000567999	SIN3A	Q96ST3	1273 aa		31.54	■■■□□ 2.64
DEF8-221	ENST00000567999	AHDC1	Q5TGY3	1603 aa	Predicted RBP	31.53	■■■□□ 2.64
DEF8-221	ENST00000567999	CDC42BPG	Q6DT37	1551 aa		31.53	■■■□□ 2.64
DEF8-221	ENST00000567999	C1orf167	Q5SNV9	1468 aa		31.51	■■■□□ 2.63
DEF8-221	ENST00000567999	NHSL1	Q5SYE7	1610 aa		31.49	■■■□□ 2.63

Retrieved 100 of 20,778 RNA–protein pairs in 22 ms