RNA–Protein interactions for RNA: ENST00000567705.5

INO80E-210, Transcript of INO80 complex subunit E, human

TSL 3 BASIC

Gene INO80E, Length 880 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
INO80E-210	ENST00000567705	RIMS2	Q9UQ26	1411 aa		24.68	■■□□□ 1.54
INO80E-210	ENST00000567705	FOXD1	Q16676	465 aa		24.67	■■□□□ 1.54
INO80E-210	ENST00000567705	EID1	Q9Y6B2	187 aa		24.67	■■□□□ 1.54
INO80E-210	ENST00000567705	PLEKHG1	Q9ULL1	1385 aa		24.63	■■□□□ 1.53
INO80E-210	ENST00000567705	NEXMIF	Q5QGS0	1516 aa		24.6	■■□□□ 1.53
INO80E-210	ENST00000567705	SPATA31E1	Q6ZUB1	1445 aa		24.6	■■□□□ 1.53
INO80E-210	ENST00000567705	CHGA	P10645	457 aa	Known RBP	24.58	■■□□□ 1.53
INO80E-210	ENST00000567705	ABCF1	Q8NE71	845 aa	Known RBP eCLIP	24.58	■■□□□ 1.53
INO80E-210	ENST00000567705	KIF1B	O60333	1816 aa		24.58	■■□□□ 1.53
INO80E-210	ENST00000567705	STRCP1	A6NGW2	1772 aa		24.57	■■□□□ 1.52
INO80E-210	ENST00000567705	CPS1	P31327	1500 aa		24.57	■■□□□ 1.52
INO80E-210	ENST00000567705	HDGF	P51858	240 aa	Known RBP	24.57	■■□□□ 1.52
INO80E-210	ENST00000567705	ANKRD30B	Q9BXX2	1392 aa		24.56	■■□□□ 1.52
INO80E-210	ENST00000567705	CCDC144A	A2RUR9	1427 aa		24.56	■■□□□ 1.52
INO80E-210	ENST00000567705	ADAMTS13	Q76LX8	1427 aa		24.56	■■□□□ 1.52
INO80E-210	ENST00000567705	NRXN3	Q9Y4C0	1643 aa		24.53	■■□□□ 1.52
INO80E-210	ENST00000567705	SETBP1	Q9Y6X0	1596 aa		24.53	■■□□□ 1.52
INO80E-210	ENST00000567705	TRIM26	Q12899	539 aa	Predicted RBP	24.52	■■□□□ 1.52
INO80E-210	ENST00000567705	UBAP1L	F5GYI3	381 aa		24.51	■■□□□ 1.51
INO80E-210	ENST00000567705	TBX22	Q9Y458	520 aa		24.51	■■□□□ 1.51
INO80E-210	ENST00000567705	RPGRIP1L	Q68CZ1	1315 aa		24.51	■■□□□ 1.51
INO80E-210	ENST00000567705	DIP2A	Q14689	1571 aa		24.5	■■□□□ 1.51
INO80E-210	ENST00000567705	NWD1	Q149M9	1564 aa		24.5	■■□□□ 1.51
INO80E-210	ENST00000567705	SLC26A8	Q96RN1	970 aa		24.5	■■□□□ 1.51
INO80E-210	ENST00000567705	NUTM2D	Q5VT03	806 aa	Predicted RBP	24.49	■■□□□ 1.51
INO80E-210	ENST00000567705	LRRC7	Q96NW7	1537 aa		24.47	■■□□□ 1.51
INO80E-210	ENST00000567705	PPL	O60437	1756 aa		24.47	■■□□□ 1.51
INO80E-210	ENST00000567705	PPP1R15A	O75807	674 aa	Predicted RBP	24.46	■■□□□ 1.51
INO80E-210	ENST00000567705	ZNF326	Q5BKZ1	582 aa	Known RBP	24.46	■■□□□ 1.51
INO80E-210	ENST00000567705	PIK3R4	Q99570	1358 aa		24.45	■■□□□ 1.5
INO80E-210	ENST00000567705	IFT172	Q9UG01	1749 aa		24.45	■■□□□ 1.5
INO80E-210	ENST00000567705	KCNA6	P17658	529 aa		24.45	■■□□□ 1.5
INO80E-210	ENST00000567705	CHD2	O14647	1828 aa	Known RBP	24.43	■■□□□ 1.5
INO80E-210	ENST00000567705	NKTR	P30414	1462 aa	Known RBP	24.42	■■□□□ 1.5
INO80E-210	ENST00000567705	VGF	O15240	615 aa	Predicted RBP	24.41	■■□□□ 1.5
INO80E-210	ENST00000567705	SETD1A	O15047	1707 aa	Known RBP	24.41	■■□□□ 1.5
INO80E-210	ENST00000567705	TOM1	O60784	492 aa		24.4	■■□□□ 1.5
INO80E-210	ENST00000567705	PTPRU	Q92729	1446 aa		24.4	■■□□□ 1.5
INO80E-210	ENST00000567705	ALK	Q9UM73	1620 aa		24.39	■■□□□ 1.49
INO80E-210	ENST00000567705	NRXN1	Q9ULB1	1477 aa		24.38	■■□□□ 1.49
INO80E-210	ENST00000567705	XIRP1	Q702N8	1843 aa	Known RBP	24.38	■■□□□ 1.49
INO80E-210	ENST00000567705	MET	P08581	1390 aa		24.37	■■□□□ 1.49
INO80E-210	ENST00000567705	ADGRF5	Q8IZF2	1346 aa		24.35	■■□□□ 1.49
INO80E-210	ENST00000567705	RGL3	Q3MIN7	710 aa		24.35	■■□□□ 1.49
INO80E-210	ENST00000567705	XRN1	Q8IZH2	1706 aa	Known RBP	24.35	■■□□□ 1.49
INO80E-210	ENST00000567705	PRAG1	Q86YV5	1406 aa		24.35	■■□□□ 1.49
INO80E-210	ENST00000567705	MYOM2	P54296	1465 aa		24.34	■■□□□ 1.49
INO80E-210	ENST00000567705	BCAN	Q96GW7	911 aa		24.34	■■□□□ 1.49
INO80E-210	ENST00000567705	SENP3	Q9H4L4	574 aa	Predicted RBP	24.34	■■□□□ 1.49
INO80E-210	ENST00000567705	PIK3C2G	O75747	1445 aa		24.34	■■□□□ 1.49
INO80E-210	ENST00000567705	TMEM94	Q12767	1356 aa		24.32	■■□□□ 1.48
INO80E-210	ENST00000567705	DHX57	Q6P158	1386 aa	Known RBP	24.32	■■□□□ 1.48
INO80E-210	ENST00000567705	PIP4K2B	P78356	416 aa		24.31	■■□□□ 1.48
INO80E-210	ENST00000567705	NCOA3	Q9Y6Q9	1424 aa		24.3	■■□□□ 1.48
INO80E-210	ENST00000567705	SCAF1	Q9H7N4	1312 aa	Known RBP	24.3	■■□□□ 1.48
INO80E-210	ENST00000567705	AMOTL2	Q9Y2J4	779 aa		24.28	■■□□□ 1.48
INO80E-210	ENST00000567705	ASXL1	Q8IXJ9	1541 aa		24.25	■■□□□ 1.47
INO80E-210	ENST00000567705	PROSER2	Q86WR7	435 aa	Predicted RBP	24.25	■■□□□ 1.47
INO80E-210	ENST00000567705	HSPA1L	P34931	641 aa		24.24	■■□□□ 1.47
INO80E-210	ENST00000567705	STAC3	Q96MF2	364 aa		24.23	■■□□□ 1.47
INO80E-210	ENST00000567705	PTCH1	Q13635	1447 aa		24.23	■■□□□ 1.47
INO80E-210	ENST00000567705	DISP3	Q9P2K9	1392 aa		24.22	■■□□□ 1.47
INO80E-210	ENST00000567705	C14orf93	Q9H972	538 aa	Known RBP	24.22	■■□□□ 1.47
INO80E-210	ENST00000567705	RBM33	Q96EV2	1170 aa	Known RBP	24.21	■■□□□ 1.47
INO80E-210	ENST00000567705	TECPR2	O15040	1411 aa		24.2	■■□□□ 1.46
INO80E-210	ENST00000567705	LAMC1	P11047	1609 aa		24.17	■■□□□ 1.46
INO80E-210	ENST00000567705	ROBO2	Q9HCK4	1378 aa		24.16	■■□□□ 1.46
INO80E-210	ENST00000567705	ADGRB1	O14514	1584 aa		24.16	■■□□□ 1.46
INO80E-210	ENST00000567705	DCAF11	Q8TEB1	546 aa		24.16	■■□□□ 1.46
INO80E-210	ENST00000567705	ABCC11	Q96J66	1382 aa		24.16	■■□□□ 1.46
INO80E-210	ENST00000567705	LRPPRC	P42704	1394 aa	Known RBP	24.15	■■□□□ 1.46
INO80E-210	ENST00000567705	SIN3A	Q96ST3	1273 aa		24.14	■■□□□ 1.45
INO80E-210	ENST00000567705	DCC	P43146	1447 aa		24.13	■■□□□ 1.45
INO80E-210	ENST00000567705	CFAP70	Q5T0N1	1121 aa		24.13	■■□□□ 1.45
INO80E-210	ENST00000567705	MSH6	P52701	1360 aa		24.13	■■□□□ 1.45
INO80E-210	ENST00000567705	KNDC1	Q76NI1	1749 aa		24.13	■■□□□ 1.45
INO80E-210	ENST00000567705	SIPA1L2	Q9P2F8	1722 aa	Predicted RBP	24.13	■■□□□ 1.45
INO80E-210	ENST00000567705	C19orf44	Q9H6X5	657 aa		24.12	■■□□□ 1.45
INO80E-210	ENST00000567705	YTHDC2	Q9H6S0	1430 aa	Known RBP	24.11	■■□□□ 1.45
INO80E-210	ENST00000567705	TMEM132E	Q6IEE7	984 aa		24.11	■■□□□ 1.45
INO80E-210	ENST00000567705	FAM135B	Q49AJ0	1406 aa		24.1	■■□□□ 1.45
INO80E-210	ENST00000567705	ADGRL3	Q9HAR2	1447 aa		24.1	■■□□□ 1.45
INO80E-210	ENST00000567705	SIRT1	Q96EB6	747 aa		24.09	■■□□□ 1.45
INO80E-210	ENST00000567705	NALCN	Q8IZF0	1738 aa		24.08	■■□□□ 1.45
INO80E-210	ENST00000567705	PCGF6	Q9BYE7	350 aa		24.08	■■□□□ 1.45
INO80E-210	ENST00000567705	KDM2A	Q9Y2K7	1162 aa		24.07	■■□□□ 1.44
INO80E-210	ENST00000567705	L3MBTL2	Q969R5	705 aa		24.06	■■□□□ 1.44
INO80E-210	ENST00000567705	ILDR2	Q71H61	639 aa		24.05	■■□□□ 1.44
INO80E-210	ENST00000567705	DLC1	Q96QB1	1528 aa		24.05	■■□□□ 1.44
INO80E-210	ENST00000567705	KIAA1210	Q9ULL0	1709 aa		24.04	■■□□□ 1.44
INO80E-210	ENST00000567705	CADPS2	Q86UW7	1296 aa		24.04	■■□□□ 1.44
INO80E-210	ENST00000567705	SLAIN2	Q9P270	581 aa		24.04	■■□□□ 1.44
INO80E-210	ENST00000567705	PLEKHH1	Q9ULM0	1364 aa		24.02	■■□□□ 1.44
INO80E-210	ENST00000567705	MST1R	Q04912	1400 aa		24.01	■■□□□ 1.43
INO80E-210	ENST00000567705	ROBO1	Q9Y6N7	1651 aa		24.01	■■□□□ 1.43
INO80E-210	ENST00000567705	MED1	Q15648	1581 aa	Predicted RBP	23.99	■■□□□ 1.43
INO80E-210	ENST00000567705	WAPL	Q7Z5K2	1190 aa		23.99	■■□□□ 1.43
INO80E-210	ENST00000567705	STK26	Q9P289	416 aa		23.99	■■□□□ 1.43
INO80E-210	ENST00000567705	CDC42BPG	Q6DT37	1551 aa		23.99	■■□□□ 1.43
INO80E-210	ENST00000567705	NEUROD1	Q13562	356 aa		23.98	■■□□□ 1.43

Retrieved 100 of 20,778 RNA–protein pairs in 8.9 ms