RNA–Protein interactions for RNA: ENST00000567470.1

RBFOX1-217, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 2

Gene RBFOX1, Length 420 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-217ENST00000567470 ALKQ9UM73 1620 aa27.43■■□□□ 1.98
RBFOX1-217ENST00000567470 BCANQ96GW7 911 aa27.43■■□□□ 1.98
RBFOX1-217ENST00000567470 PPP1R15AO75807 674 aaPredicted RBP27.42■■□□□ 1.98
RBFOX1-217ENST00000567470 SPHKAPQ2M3C7 1700 aa27.41■■□□□ 1.98
RBFOX1-217ENST00000567470 DISP3Q9P2K9 1392 aa27.4■■□□□ 1.98
RBFOX1-217ENST00000567470 SENP3Q9H4L4 574 aaPredicted RBP27.4■■□□□ 1.98
RBFOX1-217ENST00000567470 PLEKHG1Q9ULL1 1385 aa27.39■■□□□ 1.98
RBFOX1-217ENST00000567470 HDGFP51858 240 aaKnown RBP27.38■■□□□ 1.97
RBFOX1-217ENST00000567470 HFM1A2PYH4 1435 aa27.38■■□□□ 1.97
RBFOX1-217ENST00000567470 XIRP1Q702N8 1843 aaKnown RBP27.37■■□□□ 1.97
RBFOX1-217ENST00000567470 NWD1Q149M9 1564 aa27.36■■□□□ 1.97
RBFOX1-217ENST00000567470 HSPA1LP34931 641 aa27.36■■□□□ 1.97
RBFOX1-217ENST00000567470 KCNA6P17658 529 aa27.35■■□□□ 1.97
RBFOX1-217ENST00000567470 ABCF1Q8NE71 845 aaKnown RBP eCLIP27.35■■□□□ 1.97
RBFOX1-217ENST00000567470 NKTRP30414 1462 aaKnown RBP27.33■■□□□ 1.97
RBFOX1-217ENST00000567470 NUTM2DQ5VT03 806 aaPredicted RBP27.32■■□□□ 1.96
RBFOX1-217ENST00000567470 TMEM94Q12767 1356 aa27.32■■□□□ 1.96
RBFOX1-217ENST00000567470 TRPM2O94759 1503 aa27.29■■□□□ 1.96
RBFOX1-217ENST00000567470 PROSER2Q86WR7 435 aaPredicted RBP27.28■■□□□ 1.96
RBFOX1-217ENST00000567470 TRIM52Q96A61 297 aa27.28■■□□□ 1.96
RBFOX1-217ENST00000567470 CLTCL1P53675 1640 aa27.27■■□□□ 1.96
RBFOX1-217ENST00000567470 DIP2AQ14689 1571 aa27.27■■□□□ 1.96
RBFOX1-217ENST00000567470 ADAMTS13Q76LX8 1427 aa27.25■■□□□ 1.95
RBFOX1-217ENST00000567470 CHD2O14647 1828 aaKnown RBP27.25■■□□□ 1.95
RBFOX1-217ENST00000567470 RBM33Q96EV2 1170 aaKnown RBP27.25■■□□□ 1.95
RBFOX1-217ENST00000567470 TBX22Q9Y458 520 aa27.24■■□□□ 1.95
RBFOX1-217ENST00000567470 ZNF326Q5BKZ1 582 aaKnown RBP27.22■■□□□ 1.95
RBFOX1-217ENST00000567470 SLC4A1APQ9BWU0 796 aaKnown RBP27.19■■□□□ 1.94
RBFOX1-217ENST00000567470 MSH6P52701 1360 aa27.18■■□□□ 1.94
RBFOX1-217ENST00000567470 KIF1BO60333 1816 aa27.18■■□□□ 1.94
RBFOX1-217ENST00000567470 MED1Q15648 1581 aaPredicted RBP27.18■■□□□ 1.94
RBFOX1-217ENST00000567470 PIK3R4Q99570 1358 aa27.17■■□□□ 1.94
RBFOX1-217ENST00000567470 SETBP1Q9Y6X0 1596 aa27.16■■□□□ 1.94
RBFOX1-217ENST00000567470 NRXN3Q9Y4C0 1643 aa27.16■■□□□ 1.94
RBFOX1-217ENST00000567470 NEXMIFQ5QGS0 1516 aa27.16■■□□□ 1.94
RBFOX1-217ENST00000567470 ILDR2Q71H61 639 aa27.15■■□□□ 1.94
RBFOX1-217ENST00000567470 FAM135BQ49AJ0 1406 aa27.13■■□□□ 1.93
RBFOX1-217ENST00000567470 ROBO1Q9Y6N7 1651 aa27.11■■□□□ 1.93
RBFOX1-217ENST00000567470 PTPRUQ92729 1446 aa27.09■■□□□ 1.93
RBFOX1-217ENST00000567470 C14orf37Q86TY3 774 aa27.09■■□□□ 1.93
RBFOX1-217ENST00000567470 NCOA3Q9Y6Q9 1424 aa27.08■■□□□ 1.93
RBFOX1-217ENST00000567470 AMOTL2Q9Y2J4 779 aa27.07■■□□□ 1.92
RBFOX1-217ENST00000567470 XRN1Q8IZH2 1706 aaKnown RBP27.07■■□□□ 1.92
RBFOX1-217ENST00000567470 FOXD1Q16676 465 aa27.06■■□□□ 1.92
RBFOX1-217ENST00000567470 METP08581 1390 aa27.03■■□□□ 1.92
RBFOX1-217ENST00000567470 SLAIN2Q9P270 581 aa27.03■■□□□ 1.92
RBFOX1-217ENST00000567470 SIPA1L2Q9P2F8 1722 aaPredicted RBP27.02■■□□□ 1.92
RBFOX1-217ENST00000567470 CCDC144AA2RUR9 1427 aa27■■□□□ 1.91
RBFOX1-217ENST00000567470 MPHOSPH9Q99550 1183 aa27■■□□□ 1.91
RBFOX1-217ENST00000567470 SETD5Q9C0A6 1442 aa26.99■■□□□ 1.91
RBFOX1-217ENST00000567470 PPLO60437 1756 aa26.99■■□□□ 1.91
RBFOX1-217ENST00000567470 VGFO15240 615 aaPredicted RBP26.98■■□□□ 1.91
RBFOX1-217ENST00000567470 PHF23Q9BUL5 403 aaPredicted RBP26.98■■□□□ 1.91
RBFOX1-217ENST00000567470 C19orf44Q9H6X5 657 aa26.98■■□□□ 1.91
RBFOX1-217ENST00000567470 RPGRIP1LQ68CZ1 1315 aa26.97■■□□□ 1.91
RBFOX1-217ENST00000567470 ATF3P18847 181 aa26.97■■□□□ 1.91
RBFOX1-217ENST00000567470 CADPS2Q86UW7 1296 aa26.97■■□□□ 1.91
RBFOX1-217ENST00000567470 PHLPP1O60346 1717 aa26.96■■□□□ 1.91
RBFOX1-217ENST00000567470 SETD1AO15047 1707 aaKnown RBP26.94■■□□□ 1.9
RBFOX1-217ENST00000567470 ACIN1Q9UKV3 1341 aaKnown RBP26.93■■□□□ 1.9
RBFOX1-217ENST00000567470 DCCP43146 1447 aa26.92■■□□□ 1.9
RBFOX1-217ENST00000567470 SOCS7O14512 581 aa26.92■■□□□ 1.9
RBFOX1-217ENST00000567470 RAB3GAP2Q9H2M9 1393 aa26.91■■□□□ 1.9
RBFOX1-217ENST00000567470 SPATA31E1Q6ZUB1 1445 aa26.9■■□□□ 1.9
RBFOX1-217ENST00000567470 ADGRL3Q9HAR2 1447 aa26.88■■□□□ 1.89
RBFOX1-217ENST00000567470 NALCNQ8IZF0 1738 aa26.87■■□□□ 1.89
RBFOX1-217ENST00000567470 COL16A1Q07092 1604 aaPredicted RBP26.87■■□□□ 1.89
RBFOX1-217ENST00000567470 RGL3Q3MIN7 710 aa26.87■■□□□ 1.89
RBFOX1-217ENST00000567470 PTCH1Q13635 1447 aa26.87■■□□□ 1.89
RBFOX1-217ENST00000567470 IFT172Q9UG01 1749 aa26.86■■□□□ 1.89
RBFOX1-217ENST00000567470 AHDC1Q5TGY3 1603 aaPredicted RBP26.85■■□□□ 1.89
RBFOX1-217ENST00000567470 ANKRD30BQ9BXX2 1392 aa26.83■■□□□ 1.88
RBFOX1-217ENST00000567470 JCADQ9P266 1359 aa26.83■■□□□ 1.88
RBFOX1-217ENST00000567470 MST1RQ04912 1400 aa26.82■■□□□ 1.88
RBFOX1-217ENST00000567470 ADGRF5Q8IZF2 1346 aa26.82■■□□□ 1.88
RBFOX1-217ENST00000567470 ROBO2Q9HCK4 1378 aa26.82■■□□□ 1.88
RBFOX1-217ENST00000567470 PRAG1Q86YV5 1406 aa26.82■■□□□ 1.88
RBFOX1-217ENST00000567470 ASXL1Q8IXJ9 1541 aa26.81■■□□□ 1.88
RBFOX1-217ENST00000567470 BRINP3Q76B58 766 aa26.81■■□□□ 1.88
RBFOX1-217ENST00000567470 PIK3C2GO75747 1445 aa26.75■■□□□ 1.87
RBFOX1-217ENST00000567470 NHSL1Q5SYE7 1610 aa26.73■■□□□ 1.87
RBFOX1-217ENST00000567470 RGS17Q9UGC6 210 aaPredicted RBP26.73■■□□□ 1.87
RBFOX1-217ENST00000567470 SHPRHQ149N8 1683 aa26.73■■□□□ 1.87
RBFOX1-217ENST00000567470 C1orf167Q5SNV9 1468 aa26.7■■□□□ 1.87
RBFOX1-217ENST00000567470 MYOM2P54296 1465 aa26.69■■□□□ 1.86
RBFOX1-217ENST00000567470 STK26Q9P289 416 aa26.69■■□□□ 1.86
RBFOX1-217ENST00000567470 SPATA31A6Q5VVP1 1343 aa26.68■■□□□ 1.86
RBFOX1-217ENST00000567470 TECPR2O15040 1411 aa26.68■■□□□ 1.86
RBFOX1-217ENST00000567470 LRPPRCP42704 1394 aaKnown RBP26.68■■□□□ 1.86
RBFOX1-217ENST00000567470 LRP6O75581 1613 aa26.68■■□□□ 1.86
RBFOX1-217ENST00000567470 KNDC1Q76NI1 1749 aa26.68■■□□□ 1.86
RBFOX1-217ENST00000567470 CDC42BPGQ6DT37 1551 aa26.67■■□□□ 1.86
RBFOX1-217ENST00000567470 NRXN1Q9ULB1 1477 aa26.66■■□□□ 1.86
RBFOX1-217ENST00000567470 LAMC1P11047 1609 aa26.65■■□□□ 1.86
RBFOX1-217ENST00000567470 TMEM132EQ6IEE7 984 aa26.65■■□□□ 1.86
RBFOX1-217ENST00000567470 HRCP23327 699 aa26.63■■□□□ 1.85
RBFOX1-217ENST00000567470 DDX17Q92841 729 aaKnown RBP26.63■■□□□ 1.85
RBFOX1-217ENST00000567470 YTHDC2Q9H6S0 1430 aaKnown RBP26.63■■□□□ 1.85
RBFOX1-217ENST00000567470 ABCC11Q96J66 1382 aa26.62■■□□□ 1.85
RBFOX1-217ENST00000567470 MEX3CQ5U5Q3 659 aaKnown RBP26.62■■□□□ 1.85
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms