RNA–Protein interactions for RNA: ENST00000566915.5

LPCAT2-208, Transcript of lysophosphatidylcholine acyltransferase 2, humanhuman

TSL 1 (best)

Gene LPCAT2, Length 5,285 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT2-208ENST00000566915 TOM1O60784 492 aa5.43□□□□□ -1.54
LPCAT2-208ENST00000566915 ATF3P18847 181 aa5.43□□□□□ -1.54
LPCAT2-208ENST00000566915 ATP10AO60312 1499 aa5.43□□□□□ -1.54
LPCAT2-208ENST00000566915 MAGI3Q5TCQ9 1506 aa5.43□□□□□ -1.54
LPCAT2-208ENST00000566915 ST18O60284 1047 aa5.43□□□□□ -1.54
LPCAT2-208ENST00000566915 TERF2IPQ9NYB0 399 aa5.43□□□□□ -1.54
LPCAT2-208ENST00000566915 KIF3AQ9Y496 699 aa5.42□□□□□ -1.54
LPCAT2-208ENST00000566915 WASHC2AQ641Q2 1341 aa5.42□□□□□ -1.54
LPCAT2-208ENST00000566915 PDE4AP27815 886 aa5.42□□□□□ -1.54
LPCAT2-208ENST00000566915 RTF1Q92541 710 aaKnown RBP5.42□□□□□ -1.54
LPCAT2-208ENST00000566915 ATP6V1DQ9Y5K8 247 aa5.42□□□□□ -1.54
LPCAT2-208ENST00000566915 ZFYVE16Q7Z3T8 1539 aa5.42□□□□□ -1.54
LPCAT2-208ENST00000566915 VGFO15240 615 aaPredicted RBP5.42□□□□□ -1.54
LPCAT2-208ENST00000566915 RRP1P56182 461 aaKnown RBP5.42□□□□□ -1.54
LPCAT2-208ENST00000566915 SLC52A1Q9NWF4 448 aa5.42□□□□□ -1.54
LPCAT2-208ENST00000566915 CCDC141Q6ZP82 1450 aa5.42□□□□□ -1.54
LPCAT2-208ENST00000566915 PLCB2Q00722 1185 aa5.42□□□□□ -1.54
LPCAT2-208ENST00000566915 AFAP1Q8N556 730 aa5.42□□□□□ -1.54
LPCAT2-208ENST00000566915 DISP1Q96F81 1524 aa5.42□□□□□ -1.54
LPCAT2-208ENST00000566915 RTN4Q9NQC3 1192 aaKnown RBP5.41□□□□□ -1.54
LPCAT2-208ENST00000566915 GPATCH3Q96I76 525 aa5.41□□□□□ -1.54
LPCAT2-208ENST00000566915 CCDC144AA2RUR9 1427 aa5.41□□□□□ -1.54
LPCAT2-208ENST00000566915 KIAA1107Q9UPP5 1409 aa5.41□□□□□ -1.54
LPCAT2-208ENST00000566915 DCAF8L1A6NGE4 600 aa5.41□□□□□ -1.54
LPCAT2-208ENST00000566915 SRPK2P78362 688 aaKnown RBP5.41□□□□□ -1.54
LPCAT2-208ENST00000566915 HMGB2P26583 209 aaKnown RBP5.4□□□□□ -1.54
LPCAT2-208ENST00000566915 DRC7Q8IY82 874 aa5.4□□□□□ -1.54
LPCAT2-208ENST00000566915 ISY1Q9ULR0 285 aaKnown RBP5.4□□□□□ -1.54
LPCAT2-208ENST00000566915 SUPT6HQ7KZ85 1726 aaKnown RBP5.4□□□□□ -1.54
LPCAT2-208ENST00000566915 NCOA2Q15596 1464 aa5.4□□□□□ -1.54
LPCAT2-208ENST00000566915 U2AF1L5P0DN76 240 aaPredicted RBP5.4□□□□□ -1.54
LPCAT2-208ENST00000566915 U2AF1Q01081 240 aaKnown RBP eCLIP5.4□□□□□ -1.54
LPCAT2-208ENST00000566915 MTERF4Q7Z6M4 381 aaKnown RBP5.4□□□□□ -1.54
LPCAT2-208ENST00000566915 ITPRIPQ8IWB1 547 aa5.4□□□□□ -1.54
LPCAT2-208ENST00000566915 FAM135AQ9P2D6 1515 aa5.4□□□□□ -1.55
LPCAT2-208ENST00000566915 GLI2P10070 1586 aa5.4□□□□□ -1.55
LPCAT2-208ENST00000566915 RRBP1Q9P2E9 1410 aaKnown RBP5.4□□□□□ -1.55
LPCAT2-208ENST00000566915 BRD4O60885 1362 aaPredicted RBP5.4□□□□□ -1.55
LPCAT2-208ENST00000566915 ADRA2BP18089 450 aa5.39□□□□□ -1.55
LPCAT2-208ENST00000566915 TXNDC2Q86VQ3 553 aa5.39□□□□□ -1.55
LPCAT2-208ENST00000566915 PROSER2Q86WR7 435 aaPredicted RBP5.39□□□□□ -1.55
LPCAT2-208ENST00000566915 STK31Q9BXU1 1019 aa5.39□□□□□ -1.55
LPCAT2-208ENST00000566915 SHROOM2Q13796 1616 aa5.39□□□□□ -1.55
LPCAT2-208ENST00000566915 TNRQ92752 1358 aa5.39□□□□□ -1.55
LPCAT2-208ENST00000566915 USP47Q96K76 1375 aa5.39□□□□□ -1.55
LPCAT2-208ENST00000566915 A0A0G2JS52 829 aa5.39□□□□□ -1.55
LPCAT2-208ENST00000566915 SMC4Q9NTJ3 1288 aa5.39□□□□□ -1.55
LPCAT2-208ENST00000566915 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP5.39□□□□□ -1.55
LPCAT2-208ENST00000566915 MAP7D2Q96T17 732 aa5.39□□□□□ -1.55
LPCAT2-208ENST00000566915 ROCK1Q13464 1354 aa5.39□□□□□ -1.55
LPCAT2-208ENST00000566915 HSP90AA2PQ14568 343 aaPredicted RBP5.39□□□□□ -1.55
LPCAT2-208ENST00000566915 SLKQ9H2G2 1235 aaPredicted RBP5.39□□□□□ -1.55
LPCAT2-208ENST00000566915 CHMP5Q9NZZ3 219 aa5.39□□□□□ -1.55
LPCAT2-208ENST00000566915 CDK13Q14004 1512 aaKnown RBP5.39□□□□□ -1.55
LPCAT2-208ENST00000566915 ITSN2Q9NZM3 1697 aa5.39□□□□□ -1.55
LPCAT2-208ENST00000566915 ZKSCAN2Q63HK3 967 aa5.39□□□□□ -1.55
LPCAT2-208ENST00000566915 FGD6Q6ZV73 1430 aa5.38□□□□□ -1.55
LPCAT2-208ENST00000566915 ABCA8O94911 1581 aa5.38□□□□□ -1.55
LPCAT2-208ENST00000566915 NINLQ9Y2I6 1382 aa5.38□□□□□ -1.55
LPCAT2-208ENST00000566915 DDX19BQ9UMR2 479 aa5.38□□□□□ -1.55
LPCAT2-208ENST00000566915 CFAP43Q8NDM7 1665 aa5.38□□□□□ -1.55
LPCAT2-208ENST00000566915 CCDC7Q96M83 1385 aa5.38□□□□□ -1.55
LPCAT2-208ENST00000566915 NUP153P49790 1475 aaKnown RBP5.38□□□□□ -1.55
LPCAT2-208ENST00000566915 KIF16BQ96L93 1317 aa5.38□□□□□ -1.55
LPCAT2-208ENST00000566915 DHX29Q7Z478 1369 aaKnown RBP5.38□□□□□ -1.55
LPCAT2-208ENST00000566915 RTEL1-TNFRSF6BF6WH68 1400 aa5.38□□□□□ -1.55
LPCAT2-208ENST00000566915 ZCCHC11Q5TAX3 1644 aaKnown RBP5.37□□□□□ -1.55
LPCAT2-208ENST00000566915 LRRC9Q6ZRR7 1453 aa5.37□□□□□ -1.55
LPCAT2-208ENST00000566915 REC8O95072 547 aa5.37□□□□□ -1.55
LPCAT2-208ENST00000566915 LMOD2Q6P5Q4 547 aa5.37□□□□□ -1.55
LPCAT2-208ENST00000566915 MFAP1P55081 439 aaKnown RBP5.37□□□□□ -1.55
LPCAT2-208ENST00000566915 NUCB2P80303 420 aa5.37□□□□□ -1.55
LPCAT2-208ENST00000566915 A2MP01023 1474 aa5.37□□□□□ -1.55
LPCAT2-208ENST00000566915 PDZRN4Q6ZMN7 1036 aaPredicted RBP5.37□□□□□ -1.55
LPCAT2-208ENST00000566915 MAP3K1Q13233 1512 aa5.37□□□□□ -1.55
LPCAT2-208ENST00000566915 UBAP1LF5GYI3 381 aa5.36□□□□□ -1.55
LPCAT2-208ENST00000566915 GOLGA6L1Q8N7Z2 621 aa5.36□□□□□ -1.55
LPCAT2-208ENST00000566915 RPGRIP1LQ68CZ1 1315 aa5.36□□□□□ -1.55
LPCAT2-208ENST00000566915 TPM3P06753 285 aa5.36□□□□□ -1.55
LPCAT2-208ENST00000566915 PSME1Q06323 249 aa5.36□□□□□ -1.55
LPCAT2-208ENST00000566915 ST20-MTHFSA0A0A6YYL1 179 aa5.36□□□□□ -1.55
LPCAT2-208ENST00000566915 API5Q9BZZ5 524 aaKnown RBP5.36□□□□□ -1.55
LPCAT2-208ENST00000566915 ARAP3Q8WWN8 1544 aa5.36□□□□□ -1.55
LPCAT2-208ENST00000566915 SF3B2Q13435 895 aaKnown RBP5.36□□□□□ -1.55
LPCAT2-208ENST00000566915 GNL2Q13823 731 aaKnown RBP5.36□□□□□ -1.55
LPCAT2-208ENST00000566915 MRE11P49959 708 aa5.35□□□□□ -1.55
LPCAT2-208ENST00000566915 LRRFIP1Q32MZ4 808 aaKnown RBP5.35□□□□□ -1.55
LPCAT2-208ENST00000566915 DDX49Q9Y6V7 483 aaKnown RBP5.35□□□□□ -1.55
LPCAT2-208ENST00000566915 ANKRD50Q9ULJ7 1429 aa5.35□□□□□ -1.55
LPCAT2-208ENST00000566915 SAMD9Q5K651 1589 aa5.35□□□□□ -1.55
LPCAT2-208ENST00000566915 EVC2Q86UK5 1308 aa5.35□□□□□ -1.55
LPCAT2-208ENST00000566915 GPS2Q13227 327 aa5.35□□□□□ -1.55
LPCAT2-208ENST00000566915 PANK3Q9H999 370 aa5.35□□□□□ -1.55
LPCAT2-208ENST00000566915 CCDC9Q9Y3X0 531 aaKnown RBP5.35□□□□□ -1.55
LPCAT2-208ENST00000566915 DHX8Q14562 1220 aaKnown RBP5.35□□□□□ -1.55
LPCAT2-208ENST00000566915 RUFY2Q8WXA3 655 aa5.35□□□□□ -1.55
LPCAT2-208ENST00000566915 GZF1Q9H116 711 aaPredicted RBP5.34□□□□□ -1.55
LPCAT2-208ENST00000566915 PCF11O94913 1555 aaKnown RBP5.34□□□□□ -1.55
LPCAT2-208ENST00000566915 HFM1A2PYH4 1435 aa5.34□□□□□ -1.55
LPCAT2-208ENST00000566915 CT47B1P0C2W7 299 aaPredicted RBP5.34□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms