RNA–Protein interactions for RNA: ENST00000566811.5

RNF40-210, Transcript of ring finger protein 40, humanhuman

TSL 2

Gene RNF40, Length 569 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-210ENST00000566811 DHX57Q6P158 1386 aaKnown RBP29.75■■■□□ 2.35
RNF40-210ENST00000566811 SCAF11Q99590 1463 aaKnown RBP29.74■■■□□ 2.35
RNF40-210ENST00000566811 ZNF335Q9H4Z2 1342 aaPredicted RBP29.72■■■□□ 2.35
RNF40-210ENST00000566811 MED14O60244 1454 aa29.72■■■□□ 2.35
RNF40-210ENST00000566811 ZFYVE9O95405 1425 aa29.71■■■□□ 2.35
RNF40-210ENST00000566811 HDGFP51858 240 aaKnown RBP29.7■■■□□ 2.35
RNF40-210ENST00000566811 ANKLE2Q86XL3 938 aa29.7■■■□□ 2.35
RNF40-210ENST00000566811 IQGAP1P46940 1657 aa29.69■■■□□ 2.34
RNF40-210ENST00000566811 EID1Q9Y6B2 187 aa29.69■■■□□ 2.34
RNF40-210ENST00000566811 CHGAP10645 457 aaKnown RBP29.68■■■□□ 2.34
RNF40-210ENST00000566811 IFT172Q9UG01 1749 aa29.68■■■□□ 2.34
RNF40-210ENST00000566811 PPLO60437 1756 aa29.67■■■□□ 2.34
RNF40-210ENST00000566811 NEXMIFQ5QGS0 1516 aa29.67■■■□□ 2.34
RNF40-210ENST00000566811 SPATA31E1Q6ZUB1 1445 aa29.67■■■□□ 2.34
RNF40-210ENST00000566811 RIMS2Q9UQ26 1411 aa29.67■■■□□ 2.34
RNF40-210ENST00000566811 ABCF1Q8NE71 845 aaKnown RBP eCLIP29.66■■■□□ 2.34
RNF40-210ENST00000566811 RPGRIP1LQ68CZ1 1315 aa29.64■■■□□ 2.34
RNF40-210ENST00000566811 UBAP1LF5GYI3 381 aa29.61■■■□□ 2.33
RNF40-210ENST00000566811 NPHP4O75161 1426 aaPredicted RBP29.61■■■□□ 2.33
RNF40-210ENST00000566811 ZNF326Q5BKZ1 582 aaKnown RBP29.6■■■□□ 2.33
RNF40-210ENST00000566811 TXNDC2Q86VQ3 553 aa29.59■■■□□ 2.33
RNF40-210ENST00000566811 DIP2AQ14689 1571 aa29.58■■■□□ 2.33
RNF40-210ENST00000566811 PLEKHG1Q9ULL1 1385 aa29.57■■■□□ 2.32
RNF40-210ENST00000566811 CLSPNQ9HAW4 1339 aa29.56■■■□□ 2.32
RNF40-210ENST00000566811 PPP1R15AO75807 674 aaPredicted RBP29.55■■■□□ 2.32
RNF40-210ENST00000566811 SETBP1Q9Y6X0 1596 aa29.55■■■□□ 2.32
RNF40-210ENST00000566811 LTKP29376 864 aa29.54■■■□□ 2.32
RNF40-210ENST00000566811 MYOM2P54296 1465 aa29.53■■■□□ 2.32
RNF40-210ENST00000566811 STAC3Q96MF2 364 aa29.51■■■□□ 2.31
RNF40-210ENST00000566811 VGFO15240 615 aaPredicted RBP29.5■■■□□ 2.31
RNF40-210ENST00000566811 LAMC1P11047 1609 aa29.47■■■□□ 2.31
RNF40-210ENST00000566811 NRXN3Q9Y4C0 1643 aa29.47■■■□□ 2.31
RNF40-210ENST00000566811 RGL3Q3MIN7 710 aa29.44■■■□□ 2.3
RNF40-210ENST00000566811 NRXN1Q9ULB1 1477 aa29.43■■■□□ 2.3
RNF40-210ENST00000566811 SETD1AO15047 1707 aaKnown RBP29.4■■■□□ 2.3
RNF40-210ENST00000566811 PIK3R4Q99570 1358 aa29.39■■■□□ 2.3
RNF40-210ENST00000566811 PIK3C2GO75747 1445 aa29.39■■■□□ 2.3
RNF40-210ENST00000566811 ADAMTS13Q76LX8 1427 aa29.39■■■□□ 2.3
RNF40-210ENST00000566811 NWD1Q149M9 1564 aa29.38■■■□□ 2.29
RNF40-210ENST00000566811 CHD2O14647 1828 aaKnown RBP29.37■■■□□ 2.29
RNF40-210ENST00000566811 BCANQ96GW7 911 aa29.36■■■□□ 2.29
RNF40-210ENST00000566811 TBX22Q9Y458 520 aa29.36■■■□□ 2.29
RNF40-210ENST00000566811 ALKQ9UM73 1620 aa29.35■■■□□ 2.29
RNF40-210ENST00000566811 HSPA1LP34931 641 aa29.35■■■□□ 2.29
RNF40-210ENST00000566811 NUTM2DQ5VT03 806 aaPredicted RBP29.35■■■□□ 2.29
RNF40-210ENST00000566811 CPS1P31327 1500 aa29.35■■■□□ 2.29
RNF40-210ENST00000566811 PIP4K2BP78356 416 aa29.34■■■□□ 2.29
RNF40-210ENST00000566811 SCAF1Q9H7N4 1312 aaKnown RBP29.34■■■□□ 2.29
RNF40-210ENST00000566811 KIAA1210Q9ULL0 1709 aa29.34■■■□□ 2.29
RNF40-210ENST00000566811 CCER1Q8TC90 406 aaPredicted RBP29.33■■■□□ 2.29
RNF40-210ENST00000566811 TOM1O60784 492 aa29.32■■■□□ 2.28
RNF40-210ENST00000566811 SIN3AQ96ST3 1273 aa29.32■■■□□ 2.28
RNF40-210ENST00000566811 TONSLQ96HA7 1378 aa29.31■■■□□ 2.28
RNF40-210ENST00000566811 DCAF11Q8TEB1 546 aa29.31■■■□□ 2.28
RNF40-210ENST00000566811 NKTRP30414 1462 aaKnown RBP29.3■■■□□ 2.28
RNF40-210ENST00000566811 ADGRF5Q8IZF2 1346 aa29.3■■■□□ 2.28
RNF40-210ENST00000566811 NEUROD1Q13562 356 aa29.29■■■□□ 2.28
RNF40-210ENST00000566811 SLC26A8Q96RN1 970 aa29.28■■■□□ 2.28
RNF40-210ENST00000566811 STRCP1A6NGW2 1772 aa29.28■■■□□ 2.28
RNF40-210ENST00000566811 XRN1Q8IZH2 1706 aaKnown RBP29.28■■■□□ 2.28
RNF40-210ENST00000566811 TIMELESSQ9UNS1 1208 aa29.25■■■□□ 2.27
RNF40-210ENST00000566811 PRAG1Q86YV5 1406 aa29.25■■■□□ 2.27
RNF40-210ENST00000566811 KNDC1Q76NI1 1749 aa29.24■■■□□ 2.27
RNF40-210ENST00000566811 MED1Q15648 1581 aaPredicted RBP29.22■■■□□ 2.27
RNF40-210ENST00000566811 KCNA6P17658 529 aa29.22■■■□□ 2.27
RNF40-210ENST00000566811 L3MBTL2Q969R5 705 aa29.22■■■□□ 2.27
RNF40-210ENST00000566811 KDM2AQ9Y2K7 1162 aa29.19■■■□□ 2.26
RNF40-210ENST00000566811 ASXL1Q8IXJ9 1541 aa29.19■■■□□ 2.26
RNF40-210ENST00000566811 METP08581 1390 aa29.18■■■□□ 2.26
RNF40-210ENST00000566811 C14orf93Q9H972 538 aaKnown RBP29.18■■■□□ 2.26
RNF40-210ENST00000566811 TRPM1Q7Z4N2 1603 aa29.17■■■□□ 2.26
RNF40-210ENST00000566811 PTCH1Q13635 1447 aa29.17■■■□□ 2.26
RNF40-210ENST00000566811 ADGRB1O14514 1584 aa29.15■■■□□ 2.26
RNF40-210ENST00000566811 TECPR2O15040 1411 aa29.13■■■□□ 2.25
RNF40-210ENST00000566811 PTPRUQ92729 1446 aa29.13■■■□□ 2.25
RNF40-210ENST00000566811 LRRC7Q96NW7 1537 aa29.13■■■□□ 2.25
RNF40-210ENST00000566811 NCOA3Q9Y6Q9 1424 aa29.12■■■□□ 2.25
RNF40-210ENST00000566811 SENP3Q9H4L4 574 aaPredicted RBP29.12■■■□□ 2.25
RNF40-210ENST00000566811 XIRP1Q702N8 1843 aaKnown RBP29.11■■■□□ 2.25
RNF40-210ENST00000566811 LRPPRCP42704 1394 aaKnown RBP29.11■■■□□ 2.25
RNF40-210ENST00000566811 YTHDC2Q9H6S0 1430 aaKnown RBP29.1■■■□□ 2.25
RNF40-210ENST00000566811 CFAP70Q5T0N1 1121 aa29.09■■■□□ 2.25
RNF40-210ENST00000566811 AMOTL2Q9Y2J4 779 aa29.09■■■□□ 2.25
RNF40-210ENST00000566811 DLC1Q96QB1 1528 aa29.09■■■□□ 2.25
RNF40-210ENST00000566811 ABCC11Q96J66 1382 aa29.08■■■□□ 2.25
RNF40-210ENST00000566811 RALGAPBQ86X10 1494 aa29.05■■■□□ 2.24
RNF40-210ENST00000566811 FAM135BQ49AJ0 1406 aa29.03■■■□□ 2.24
RNF40-210ENST00000566811 ARHGEF28Q8N1W1 1705 aaKnown RBP29.03■■■□□ 2.24
RNF40-210ENST00000566811 PROSER2Q86WR7 435 aaPredicted RBP29.01■■■□□ 2.23
RNF40-210ENST00000566811 PHF23Q9BUL5 403 aaPredicted RBP29.01■■■□□ 2.23
RNF40-210ENST00000566811 TMEM94Q12767 1356 aa29.01■■■□□ 2.23
RNF40-210ENST00000566811 SIRT1Q96EB6 747 aa29■■■□□ 2.23
RNF40-210ENST00000566811 GPRASP1Q5JY77 1395 aa28.99■■■□□ 2.23
RNF40-210ENST00000566811 NALCNQ8IZF0 1738 aa28.98■■■□□ 2.23
RNF40-210ENST00000566811 TMEM132EQ6IEE7 984 aa28.98■■■□□ 2.23
RNF40-210ENST00000566811 ROCK2O75116 1388 aaKnown RBP28.98■■■□□ 2.23
RNF40-210ENST00000566811 DCCP43146 1447 aa28.97■■■□□ 2.23
RNF40-210ENST00000566811 ROBO2Q9HCK4 1378 aa28.97■■■□□ 2.23
RNF40-210ENST00000566811 MSH6P52701 1360 aa28.95■■■□□ 2.22
RNF40-210ENST00000566811 ADGRL3Q9HAR2 1447 aa28.94■■■□□ 2.22
Retrieved 100 of 20,778 RNA–protein pairs in 100.8 ms