RNA–Protein interactions for RNA: ENST00000566600.1

NME3-209, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2

Gene NME3, Length 913 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-209ENST00000566600 RIMS2Q9UQ26 1411 aa38.42■■■■□ 3.74
NME3-209ENST00000566600 ZFYVE9O95405 1425 aa38.41■■■■□ 3.74
NME3-209ENST00000566600 IQGAP1P46940 1657 aa38.39■■■■□ 3.74
NME3-209ENST00000566600 ZNF326Q5BKZ1 582 aaKnown RBP38.38■■■■□ 3.73
NME3-209ENST00000566600 PPP1R15AO75807 674 aaPredicted RBP38.36■■■■□ 3.73
NME3-209ENST00000566600 ANKRD30BQ9BXX2 1392 aa38.34■■■■□ 3.73
NME3-209ENST00000566600 RPGRIP1LQ68CZ1 1315 aa38.28■■■■□ 3.72
NME3-209ENST00000566600 PLEKHG1Q9ULL1 1385 aa38.28■■■■□ 3.72
NME3-209ENST00000566600 BCANQ96GW7 911 aa38.25■■■■□ 3.71
NME3-209ENST00000566600 SPATA31E1Q6ZUB1 1445 aa38.24■■■■□ 3.71
NME3-209ENST00000566600 NEXMIFQ5QGS0 1516 aa38.23■■■■□ 3.71
NME3-209ENST00000566600 NUTM2DQ5VT03 806 aaPredicted RBP38.23■■■■□ 3.71
NME3-209ENST00000566600 PCGF6Q9BYE7 350 aa38.23■■■■□ 3.71
NME3-209ENST00000566600 VGFO15240 615 aaPredicted RBP38.18■■■■□ 3.7
NME3-209ENST00000566600 ZNF335Q9H4Z2 1342 aaPredicted RBP38.17■■■■□ 3.7
NME3-209ENST00000566600 RGL3Q3MIN7 710 aa38.17■■■■□ 3.7
NME3-209ENST00000566600 SLC26A8Q96RN1 970 aa38.14■■■■□ 3.7
NME3-209ENST00000566600 DHX57Q6P158 1386 aaKnown RBP38.14■■■■□ 3.7
NME3-209ENST00000566600 PPLO60437 1756 aa38.14■■■■□ 3.7
NME3-209ENST00000566600 LTBP4Q8N2S1 1624 aa38.13■■■■□ 3.69
NME3-209ENST00000566600 TBX22Q9Y458 520 aa38.1■■■■□ 3.69
NME3-209ENST00000566600 DIP2AQ14689 1571 aa38.1■■■■□ 3.69
NME3-209ENST00000566600 SENP3Q9H4L4 574 aaPredicted RBP38.09■■■■□ 3.69
NME3-209ENST00000566600 SETBP1Q9Y6X0 1596 aa38.08■■■■□ 3.69
NME3-209ENST00000566600 ADAMTS13Q76LX8 1427 aa38.06■■■■□ 3.68
NME3-209ENST00000566600 CPS1P31327 1500 aa38.06■■■■□ 3.68
NME3-209ENST00000566600 IFT172Q9UG01 1749 aa38.05■■■■□ 3.68
NME3-209ENST00000566600 CERKQ8TCT0 537 aa38.05■■■■□ 3.68
NME3-209ENST00000566600 NRXN3Q9Y4C0 1643 aa38.01■■■■□ 3.67
NME3-209ENST00000566600 PIK3R4Q99570 1358 aa38■■■■□ 3.67
NME3-209ENST00000566600 KCNA6P17658 529 aa37.99■■■■□ 3.67
NME3-209ENST00000566600 STAC3Q96MF2 364 aa37.96■■■■□ 3.67
NME3-209ENST00000566600 ADGRF5Q8IZF2 1346 aa37.95■■■■□ 3.67
NME3-209ENST00000566600 STRCP1A6NGW2 1772 aa37.95■■■■□ 3.67
NME3-209ENST00000566600 MYOM2P54296 1465 aa37.95■■■■□ 3.67
NME3-209ENST00000566600 IQSEC2Q5JU85 1478 aa37.94■■■■□ 3.66
NME3-209ENST00000566600 NWD1Q149M9 1564 aa37.93■■■■□ 3.66
NME3-209ENST00000566600 CHD2O14647 1828 aaKnown RBP37.92■■■■□ 3.66
NME3-209ENST00000566600 DCAF11Q8TEB1 546 aa37.89■■■■□ 3.66
NME3-209ENST00000566600 NKTRP30414 1462 aaKnown RBP37.89■■■■□ 3.66
NME3-209ENST00000566600 ALKQ9UM73 1620 aa37.88■■■■□ 3.65
NME3-209ENST00000566600 PIK3C2GO75747 1445 aa37.87■■■■□ 3.65
NME3-209ENST00000566600 SIN3AQ96ST3 1273 aa37.87■■■■□ 3.65
NME3-209ENST00000566600 NRXN1Q9ULB1 1477 aa37.87■■■■□ 3.65
NME3-209ENST00000566600 LRRC7Q96NW7 1537 aa37.86■■■■□ 3.65
NME3-209ENST00000566600 METP08581 1390 aa37.84■■■■□ 3.65
NME3-209ENST00000566600 NEUROD1Q13562 356 aa37.83■■■■□ 3.65
NME3-209ENST00000566600 SETD1AO15047 1707 aaKnown RBP37.82■■■■□ 3.65
NME3-209ENST00000566600 AMOTL2Q9Y2J4 779 aa37.82■■■■□ 3.64
NME3-209ENST00000566600 KDM2AQ9Y2K7 1162 aa37.82■■■■□ 3.64
NME3-209ENST00000566600 PROSER2Q86WR7 435 aaPredicted RBP37.8■■■■□ 3.64
NME3-209ENST00000566600 PTPRUQ92729 1446 aa37.79■■■■□ 3.64
NME3-209ENST00000566600 LAMC1P11047 1609 aa37.76■■■■□ 3.64
NME3-209ENST00000566600 C14orf93Q9H972 538 aaKnown RBP37.76■■■■□ 3.64
NME3-209ENST00000566600 XRN1Q8IZH2 1706 aaKnown RBP37.75■■■■□ 3.63
NME3-209ENST00000566600 TMEM94Q12767 1356 aa37.74■■■■□ 3.63
NME3-209ENST00000566600 FBXO41Q8TF61 875 aa37.71■■■■□ 3.63
NME3-209ENST00000566600 CLSPNQ9HAW4 1339 aa37.7■■■■□ 3.63
NME3-209ENST00000566600 L3MBTL2Q969R5 705 aa37.7■■■■□ 3.63
NME3-209ENST00000566600 CFAP70Q5T0N1 1121 aa37.69■■■■□ 3.62
NME3-209ENST00000566600 NCOA3Q9Y6Q9 1424 aa37.69■■■■□ 3.62
NME3-209ENST00000566600 XIRP1Q702N8 1843 aaKnown RBP37.67■■■■□ 3.62
NME3-209ENST00000566600 PRAG1Q86YV5 1406 aa37.66■■■■□ 3.62
NME3-209ENST00000566600 PTCH1Q13635 1447 aa37.63■■■■□ 3.61
NME3-209ENST00000566600 TMEM132EQ6IEE7 984 aa37.63■■■■□ 3.61
NME3-209ENST00000566600 LRPPRCP42704 1394 aaKnown RBP37.63■■■■□ 3.61
NME3-209ENST00000566600 TONSLQ96HA7 1378 aa37.63■■■■□ 3.61
NME3-209ENST00000566600 ASXL1Q8IXJ9 1541 aa37.62■■■■□ 3.61
NME3-209ENST00000566600 UBAP1LF5GYI3 381 aa37.62■■■■□ 3.61
NME3-209ENST00000566600 TOM1O60784 492 aa37.61■■■■□ 3.61
NME3-209ENST00000566600 RBM33Q96EV2 1170 aaKnown RBP37.61■■■■□ 3.61
NME3-209ENST00000566600 ABCC11Q96J66 1382 aa37.59■■■■□ 3.61
NME3-209ENST00000566600 C14orf37Q86TY3 774 aa37.59■■■■□ 3.61
NME3-209ENST00000566600 CCER1Q8TC90 406 aaPredicted RBP37.59■■■■□ 3.61
NME3-209ENST00000566600 YTHDC2Q9H6S0 1430 aaKnown RBP37.59■■■■□ 3.61
NME3-209ENST00000566600 MSH6P52701 1360 aa37.58■■■■□ 3.61
NME3-209ENST00000566600 TECPR2O15040 1411 aa37.57■■■■□ 3.6
NME3-209ENST00000566600 STK26Q9P289 416 aa37.57■■■■□ 3.6
NME3-209ENST00000566600 KIAA1210Q9ULL0 1709 aa37.56■■■■□ 3.6
NME3-209ENST00000566600 ROBO2Q9HCK4 1378 aa37.55■■■■□ 3.6
NME3-209ENST00000566600 KNDC1Q76NI1 1749 aa37.54■■■■□ 3.6
NME3-209ENST00000566600 ADGRB1O14514 1584 aa37.53■■■■□ 3.6
NME3-209ENST00000566600 C19orf44Q9H6X5 657 aa37.52■■■■□ 3.6
NME3-209ENST00000566600 SIRT1Q96EB6 747 aa37.5■■■■□ 3.59
NME3-209ENST00000566600 ILDR1Q86SU0 546 aaPredicted RBP37.47■■■■□ 3.59
NME3-209ENST00000566600 FAM135BQ49AJ0 1406 aa37.46■■■■□ 3.59
NME3-209ENST00000566600 ADGRL3Q9HAR2 1447 aa37.45■■■■□ 3.59
NME3-209ENST00000566600 ATF3P18847 181 aa37.44■■■■□ 3.58
NME3-209ENST00000566600 TIMELESSQ9UNS1 1208 aa37.44■■■■□ 3.58
NME3-209ENST00000566600 DLC1Q96QB1 1528 aa37.44■■■■□ 3.58
NME3-209ENST00000566600 DCCP43146 1447 aa37.44■■■■□ 3.58
NME3-209ENST00000566600 CADPS2Q86UW7 1296 aa37.43■■■■□ 3.58
NME3-209ENST00000566600 SIPA1L2Q9P2F8 1722 aaPredicted RBP37.43■■■■□ 3.58
NME3-209ENST00000566600 PIP4K2BP78356 416 aa37.4■■■■□ 3.58
NME3-209ENST00000566600 NALCNQ8IZF0 1738 aa37.39■■■■□ 3.58
NME3-209ENST00000566600 WAPLQ7Z5K2 1190 aa37.39■■■■□ 3.58
NME3-209ENST00000566600 SCAF1Q9H7N4 1312 aaKnown RBP37.38■■■■□ 3.58
NME3-209ENST00000566600 NBPF1Q3BBV0 1214 aa37.38■■■■□ 3.57
NME3-209ENST00000566600 TRAK1Q9UPV9 953 aa37.38■■■■□ 3.57
NME3-209ENST00000566600 TRPM1Q7Z4N2 1603 aa37.37■■■■□ 3.57
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms