RNA–Protein interactions for RNA: ENST00000566498.1

CCDC113-204, Transcript of coiled-coil domain containing 113, humanhuman

TSL 4

Gene CCDC113, Length 494 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC113-204ENST00000566498 CPS1P31327 1500 aa28.83■■■□□ 2.21
CCDC113-204ENST00000566498 NUTM2DQ5VT03 806 aaPredicted RBP28.82■■■□□ 2.2
CCDC113-204ENST00000566498 RIMS2Q9UQ26 1411 aa28.82■■■□□ 2.2
CCDC113-204ENST00000566498 SPHKAPQ2M3C7 1700 aa28.8■■■□□ 2.2
CCDC113-204ENST00000566498 ZNF326Q5BKZ1 582 aaKnown RBP28.79■■■□□ 2.2
CCDC113-204ENST00000566498 ZFYVE9O95405 1425 aa28.77■■■□□ 2.2
CCDC113-204ENST00000566498 SETD5Q9C0A6 1442 aa28.76■■■□□ 2.19
CCDC113-204ENST00000566498 FOXD1Q16676 465 aa28.74■■■□□ 2.19
CCDC113-204ENST00000566498 MPHOSPH9Q99550 1183 aa28.74■■■□□ 2.19
CCDC113-204ENST00000566498 STRCP1A6NGW2 1772 aa28.73■■■□□ 2.19
CCDC113-204ENST00000566498 ACIN1Q9UKV3 1341 aaKnown RBP28.72■■■□□ 2.19
CCDC113-204ENST00000566498 TOM1O60784 492 aa28.72■■■□□ 2.19
CCDC113-204ENST00000566498 PLEKHG1Q9ULL1 1385 aa28.72■■■□□ 2.19
CCDC113-204ENST00000566498 KCNA6P17658 529 aa28.7■■■□□ 2.18
CCDC113-204ENST00000566498 SCAF1Q9H7N4 1312 aaKnown RBP28.69■■■□□ 2.18
CCDC113-204ENST00000566498 TRPM2O94759 1503 aa28.68■■■□□ 2.18
CCDC113-204ENST00000566498 LRRC7Q96NW7 1537 aa28.68■■■□□ 2.18
CCDC113-204ENST00000566498 PIP4K2BP78356 416 aa28.67■■■□□ 2.18
CCDC113-204ENST00000566498 TBX22Q9Y458 520 aa28.67■■■□□ 2.18
CCDC113-204ENST00000566498 CLTCL1P53675 1640 aa28.67■■■□□ 2.18
CCDC113-204ENST00000566498 PROSER2Q86WR7 435 aaPredicted RBP28.66■■■□□ 2.18
CCDC113-204ENST00000566498 KIF1BO60333 1816 aa28.64■■■□□ 2.17
CCDC113-204ENST00000566498 RAB3GAP2Q9H2M9 1393 aa28.63■■■□□ 2.17
CCDC113-204ENST00000566498 RBM33Q96EV2 1170 aaKnown RBP28.6■■■□□ 2.17
CCDC113-204ENST00000566498 ADAMTS13Q76LX8 1427 aa28.55■■■□□ 2.16
CCDC113-204ENST00000566498 TMEM94Q12767 1356 aa28.55■■■□□ 2.16
CCDC113-204ENST00000566498 VGFO15240 615 aaPredicted RBP28.55■■■□□ 2.16
CCDC113-204ENST00000566498 CCDC144AA2RUR9 1427 aa28.54■■■□□ 2.16
CCDC113-204ENST00000566498 RGL3Q3MIN7 710 aa28.54■■■□□ 2.16
CCDC113-204ENST00000566498 RPGRIP1LQ68CZ1 1315 aa28.53■■■□□ 2.16
CCDC113-204ENST00000566498 CHD2O14647 1828 aaKnown RBP28.53■■■□□ 2.16
CCDC113-204ENST00000566498 AMOTL2Q9Y2J4 779 aa28.5■■■□□ 2.15
CCDC113-204ENST00000566498 NEXMIFQ5QGS0 1516 aa28.49■■■□□ 2.15
CCDC113-204ENST00000566498 XIRP1Q702N8 1843 aaKnown RBP28.49■■■□□ 2.15
CCDC113-204ENST00000566498 HRCP23327 699 aa28.49■■■□□ 2.15
CCDC113-204ENST00000566498 DIP2AQ14689 1571 aa28.49■■■□□ 2.15
CCDC113-204ENST00000566498 PIK3R4Q99570 1358 aa28.49■■■□□ 2.15
CCDC113-204ENST00000566498 NKTRP30414 1462 aaKnown RBP28.48■■■□□ 2.15
CCDC113-204ENST00000566498 C14orf37Q86TY3 774 aa28.48■■■□□ 2.15
CCDC113-204ENST00000566498 NWD1Q149M9 1564 aa28.47■■■□□ 2.15
CCDC113-204ENST00000566498 HSPA1LP34931 641 aa28.45■■■□□ 2.14
CCDC113-204ENST00000566498 SETBP1Q9Y6X0 1596 aa28.44■■■□□ 2.14
CCDC113-204ENST00000566498 MSH6P52701 1360 aa28.42■■■□□ 2.14
CCDC113-204ENST00000566498 ALKQ9UM73 1620 aa28.42■■■□□ 2.14
CCDC113-204ENST00000566498 METP08581 1390 aa28.41■■■□□ 2.14
CCDC113-204ENST00000566498 NRXN3Q9Y4C0 1643 aa28.41■■■□□ 2.14
CCDC113-204ENST00000566498 PTPRUQ92729 1446 aa28.4■■■□□ 2.14
CCDC113-204ENST00000566498 SPATA31E1Q6ZUB1 1445 aa28.37■■■□□ 2.13
CCDC113-204ENST00000566498 PPLO60437 1756 aa28.37■■■□□ 2.13
CCDC113-204ENST00000566498 C19orf44Q9H6X5 657 aa28.35■■■□□ 2.13
CCDC113-204ENST00000566498 ADGRF5Q8IZF2 1346 aa28.35■■■□□ 2.13
CCDC113-204ENST00000566498 NCOA3Q9Y6Q9 1424 aa28.35■■■□□ 2.13
CCDC113-204ENST00000566498 SLAIN2Q9P270 581 aa28.34■■■□□ 2.13
CCDC113-204ENST00000566498 ANKRD30BQ9BXX2 1392 aa28.34■■■□□ 2.13
CCDC113-204ENST00000566498 ATF3P18847 181 aa28.33■■■□□ 2.13
CCDC113-204ENST00000566498 CADPS2Q86UW7 1296 aa28.29■■■□□ 2.12
CCDC113-204ENST00000566498 FAM135BQ49AJ0 1406 aa28.28■■■□□ 2.12
CCDC113-204ENST00000566498 XRN1Q8IZH2 1706 aaKnown RBP28.26■■■□□ 2.11
CCDC113-204ENST00000566498 DISP3Q9P2K9 1392 aa28.25■■■□□ 2.11
CCDC113-204ENST00000566498 SIPA1L2Q9P2F8 1722 aaPredicted RBP28.23■■■□□ 2.11
CCDC113-204ENST00000566498 STK26Q9P289 416 aa28.22■■■□□ 2.11
CCDC113-204ENST00000566498 IFT172Q9UG01 1749 aa28.22■■■□□ 2.11
CCDC113-204ENST00000566498 TMEM132EQ6IEE7 984 aa28.21■■■□□ 2.11
CCDC113-204ENST00000566498 KDM2AQ9Y2K7 1162 aa28.21■■■□□ 2.11
CCDC113-204ENST00000566498 SETD1AO15047 1707 aaKnown RBP28.21■■■□□ 2.11
CCDC113-204ENST00000566498 ROBO1Q9Y6N7 1651 aa28.2■■■□□ 2.11
CCDC113-204ENST00000566498 DCAF11Q8TEB1 546 aa28.18■■■□□ 2.1
CCDC113-204ENST00000566498 ROBO2Q9HCK4 1378 aa28.17■■■□□ 2.1
CCDC113-204ENST00000566498 C14orf93Q9H972 538 aaKnown RBP28.16■■■□□ 2.1
CCDC113-204ENST00000566498 PIK3C2GO75747 1445 aa28.16■■■□□ 2.1
CCDC113-204ENST00000566498 CFAP70Q5T0N1 1121 aa28.15■■■□□ 2.1
CCDC113-204ENST00000566498 PTCH1Q13635 1447 aa28.12■■■□□ 2.09
CCDC113-204ENST00000566498 TRIM26Q12899 539 aaPredicted RBP28.12■■■□□ 2.09
CCDC113-204ENST00000566498 DCCP43146 1447 aa28.11■■■□□ 2.09
CCDC113-204ENST00000566498 ADGRL3Q9HAR2 1447 aa28.11■■■□□ 2.09
CCDC113-204ENST00000566498 WAPLQ7Z5K2 1190 aa28.1■■■□□ 2.09
CCDC113-204ENST00000566498 MYOM2P54296 1465 aa28.09■■■□□ 2.09
CCDC113-204ENST00000566498 STAC3Q96MF2 364 aa28.09■■■□□ 2.09
CCDC113-204ENST00000566498 LRPPRCP42704 1394 aaKnown RBP28.09■■■□□ 2.09
CCDC113-204ENST00000566498 BRINP3Q76B58 766 aa28.07■■■□□ 2.08
CCDC113-204ENST00000566498 DHX57Q6P158 1386 aaKnown RBP28.07■■■□□ 2.08
CCDC113-204ENST00000566498 ABCC11Q96J66 1382 aa28.07■■■□□ 2.08
CCDC113-204ENST00000566498 NRXN1Q9ULB1 1477 aa28.07■■■□□ 2.08
CCDC113-204ENST00000566498 NALCNQ8IZF0 1738 aa28.06■■■□□ 2.08
CCDC113-204ENST00000566498 YTHDC2Q9H6S0 1430 aaKnown RBP28.05■■■□□ 2.08
CCDC113-204ENST00000566498 PHLPP1O60346 1717 aa28.04■■■□□ 2.08
CCDC113-204ENST00000566498 MST1RQ04912 1400 aa28.04■■■□□ 2.08
CCDC113-204ENST00000566498 PRAG1Q86YV5 1406 aa28.04■■■□□ 2.08
CCDC113-204ENST00000566498 PHF23Q9BUL5 403 aaPredicted RBP28.01■■■□□ 2.07
CCDC113-204ENST00000566498 MED1Q15648 1581 aaPredicted RBP28.01■■■□□ 2.07
CCDC113-204ENST00000566498 ASXL1Q8IXJ9 1541 aa28.01■■■□□ 2.07
CCDC113-204ENST00000566498 SIRT1Q96EB6 747 aa28■■■□□ 2.07
CCDC113-204ENST00000566498 TECPR2O15040 1411 aa28■■■□□ 2.07
CCDC113-204ENST00000566498 LAMC1P11047 1609 aa27.99■■■□□ 2.07
CCDC113-204ENST00000566498 PLEKHH1Q9ULM0 1364 aa27.98■■■□□ 2.07
CCDC113-204ENST00000566498 NEUROD1Q13562 356 aa27.97■■■□□ 2.07
CCDC113-204ENST00000566498 SIN3AQ96ST3 1273 aa27.97■■■□□ 2.07
CCDC113-204ENST00000566498 POGKQ9P215 609 aa27.97■■■□□ 2.07
CCDC113-204ENST00000566498 SAFB2Q14151 953 aaKnown RBP eCLIP27.96■■■□□ 2.07
CCDC113-204ENST00000566498 ILDR2Q71H61 639 aa27.96■■■□□ 2.07
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms