RNA–Protein interactions for RNA: ENST00000566434.5

GDPD3-204, Transcript of glycerophosphodiester phosphodiesterase domain containing 3, humanhuman

TSL 3

Gene GDPD3, Length 399 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GDPD3-204ENST00000566434 LTKP29376 864 aa19.07■□□□□ 0.64
GDPD3-204ENST00000566434 MED14O60244 1454 aa19.07■□□□□ 0.64
GDPD3-204ENST00000566434 HDGFP51858 240 aaKnown RBP19.06■□□□□ 0.64
GDPD3-204ENST00000566434 BCANQ96GW7 911 aa19.05■□□□□ 0.64
GDPD3-204ENST00000566434 ZFYVE9O95405 1425 aa19.04■□□□□ 0.64
GDPD3-204ENST00000566434 NUTM2DQ5VT03 806 aaPredicted RBP19.03■□□□□ 0.64
GDPD3-204ENST00000566434 ABCF1Q8NE71 845 aaKnown RBP eCLIP19.03■□□□□ 0.64
GDPD3-204ENST00000566434 SENP3Q9H4L4 574 aaPredicted RBP19.03■□□□□ 0.64
GDPD3-204ENST00000566434 ZNF335Q9H4Z2 1342 aaPredicted RBP19■□□□□ 0.63
GDPD3-204ENST00000566434 PLEKHG1Q9ULL1 1385 aa18.98■□□□□ 0.63
GDPD3-204ENST00000566434 NEXMIFQ5QGS0 1516 aa18.97■□□□□ 0.63
GDPD3-204ENST00000566434 ANKRD30BQ9BXX2 1392 aa18.96■□□□□ 0.63
GDPD3-204ENST00000566434 RGL3Q3MIN7 710 aa18.96■□□□□ 0.63
GDPD3-204ENST00000566434 SLC26A8Q96RN1 970 aa18.95■□□□□ 0.62
GDPD3-204ENST00000566434 PCGF6Q9BYE7 350 aa18.94■□□□□ 0.62
GDPD3-204ENST00000566434 LTBP4Q8N2S1 1624 aa18.93■□□□□ 0.62
GDPD3-204ENST00000566434 RPGRIP1LQ68CZ1 1315 aa18.93■□□□□ 0.62
GDPD3-204ENST00000566434 PPLO60437 1756 aa18.93■□□□□ 0.62
GDPD3-204ENST00000566434 SPATA31E1Q6ZUB1 1445 aa18.92■□□□□ 0.62
GDPD3-204ENST00000566434 CERKQ8TCT0 537 aa18.91■□□□□ 0.62
GDPD3-204ENST00000566434 DIP2AQ14689 1571 aa18.9■□□□□ 0.62
GDPD3-204ENST00000566434 VGFO15240 615 aaPredicted RBP18.9■□□□□ 0.62
GDPD3-204ENST00000566434 CPS1P31327 1500 aa18.9■□□□□ 0.62
GDPD3-204ENST00000566434 SETBP1Q9Y6X0 1596 aa18.89■□□□□ 0.61
GDPD3-204ENST00000566434 IFT172Q9UG01 1749 aa18.88■□□□□ 0.61
GDPD3-204ENST00000566434 STRCP1A6NGW2 1772 aa18.87■□□□□ 0.61
GDPD3-204ENST00000566434 DHX57Q6P158 1386 aaKnown RBP18.87■□□□□ 0.61
GDPD3-204ENST00000566434 ADAMTS13Q76LX8 1427 aa18.87■□□□□ 0.61
GDPD3-204ENST00000566434 NRXN3Q9Y4C0 1643 aa18.86■□□□□ 0.61
GDPD3-204ENST00000566434 TBX22Q9Y458 520 aa18.86■□□□□ 0.61
GDPD3-204ENST00000566434 KCNA6P17658 529 aa18.83■□□□□ 0.6
GDPD3-204ENST00000566434 NWD1Q149M9 1564 aa18.83■□□□□ 0.6
GDPD3-204ENST00000566434 ADGRF5Q8IZF2 1346 aa18.82■□□□□ 0.6
GDPD3-204ENST00000566434 CHD2O14647 1828 aaKnown RBP18.82■□□□□ 0.6
GDPD3-204ENST00000566434 IQSEC2Q5JU85 1478 aa18.82■□□□□ 0.6
GDPD3-204ENST00000566434 PIK3R4Q99570 1358 aa18.81■□□□□ 0.6
GDPD3-204ENST00000566434 NKTRP30414 1462 aaKnown RBP18.8■□□□□ 0.6
GDPD3-204ENST00000566434 MYOM2P54296 1465 aa18.8■□□□□ 0.6
GDPD3-204ENST00000566434 ALKQ9UM73 1620 aa18.8■□□□□ 0.6
GDPD3-204ENST00000566434 LRRC7Q96NW7 1537 aa18.79■□□□□ 0.6
GDPD3-204ENST00000566434 NEUROD1Q13562 356 aa18.78■□□□□ 0.6
GDPD3-204ENST00000566434 PROSER2Q86WR7 435 aaPredicted RBP18.78■□□□□ 0.6
GDPD3-204ENST00000566434 DCAF11Q8TEB1 546 aa18.78■□□□□ 0.6
GDPD3-204ENST00000566434 KDM2AQ9Y2K7 1162 aa18.78■□□□□ 0.6
GDPD3-204ENST00000566434 METP08581 1390 aa18.78■□□□□ 0.6
GDPD3-204ENST00000566434 PIK3C2GO75747 1445 aa18.77■□□□□ 0.6
GDPD3-204ENST00000566434 SIN3AQ96ST3 1273 aa18.77■□□□□ 0.6
GDPD3-204ENST00000566434 SETD1AO15047 1707 aaKnown RBP18.77■□□□□ 0.59
GDPD3-204ENST00000566434 AMOTL2Q9Y2J4 779 aa18.76■□□□□ 0.59
GDPD3-204ENST00000566434 PTPRUQ92729 1446 aa18.75■□□□□ 0.59
GDPD3-204ENST00000566434 FBXO41Q8TF61 875 aa18.75■□□□□ 0.59
GDPD3-204ENST00000566434 TMEM94Q12767 1356 aa18.75■□□□□ 0.59
GDPD3-204ENST00000566434 XRN1Q8IZH2 1706 aaKnown RBP18.74■□□□□ 0.59
GDPD3-204ENST00000566434 LAMC1P11047 1609 aa18.74■□□□□ 0.59
GDPD3-204ENST00000566434 NRXN1Q9ULB1 1477 aa18.73■□□□□ 0.59
GDPD3-204ENST00000566434 UBAP1LF5GYI3 381 aa18.73■□□□□ 0.59
GDPD3-204ENST00000566434 C14orf37Q86TY3 774 aa18.73■□□□□ 0.59
GDPD3-204ENST00000566434 RBM33Q96EV2 1170 aaKnown RBP18.73■□□□□ 0.59
GDPD3-204ENST00000566434 XIRP1Q702N8 1843 aaKnown RBP18.72■□□□□ 0.59
GDPD3-204ENST00000566434 STAC3Q96MF2 364 aa18.72■□□□□ 0.59
GDPD3-204ENST00000566434 CFAP70Q5T0N1 1121 aa18.69■□□□□ 0.58
GDPD3-204ENST00000566434 C14orf93Q9H972 538 aaKnown RBP18.69■□□□□ 0.58
GDPD3-204ENST00000566434 MSH6P52701 1360 aa18.68■□□□□ 0.58
GDPD3-204ENST00000566434 TOM1O60784 492 aa18.68■□□□□ 0.58
GDPD3-204ENST00000566434 TMEM132EQ6IEE7 984 aa18.68■□□□□ 0.58
GDPD3-204ENST00000566434 ILDR1Q86SU0 546 aaPredicted RBP18.68■□□□□ 0.58
GDPD3-204ENST00000566434 STK26Q9P289 416 aa18.68■□□□□ 0.58
GDPD3-204ENST00000566434 ASXL1Q8IXJ9 1541 aa18.68■□□□□ 0.58
GDPD3-204ENST00000566434 SCAF1Q9H7N4 1312 aaKnown RBP18.68■□□□□ 0.58
GDPD3-204ENST00000566434 L3MBTL2Q969R5 705 aa18.67■□□□□ 0.58
GDPD3-204ENST00000566434 TONSLQ96HA7 1378 aa18.67■□□□□ 0.58
GDPD3-204ENST00000566434 PTCH1Q13635 1447 aa18.66■□□□□ 0.58
GDPD3-204ENST00000566434 PIP4K2BP78356 416 aa18.65■□□□□ 0.58
GDPD3-204ENST00000566434 LRPPRCP42704 1394 aaKnown RBP18.65■□□□□ 0.58
GDPD3-204ENST00000566434 YTHDC2Q9H6S0 1430 aaKnown RBP18.65■□□□□ 0.58
GDPD3-204ENST00000566434 NCOA3Q9Y6Q9 1424 aa18.65■□□□□ 0.58
GDPD3-204ENST00000566434 CCER1Q8TC90 406 aaPredicted RBP18.64■□□□□ 0.57
GDPD3-204ENST00000566434 KNDC1Q76NI1 1749 aa18.63■□□□□ 0.57
GDPD3-204ENST00000566434 ROBO2Q9HCK4 1378 aa18.63■□□□□ 0.57
GDPD3-204ENST00000566434 PRAG1Q86YV5 1406 aa18.63■□□□□ 0.57
GDPD3-204ENST00000566434 KIAA1210Q9ULL0 1709 aa18.6■□□□□ 0.57
GDPD3-204ENST00000566434 ABCC11Q96J66 1382 aa18.6■□□□□ 0.57
GDPD3-204ENST00000566434 ATF3P18847 181 aa18.6■□□□□ 0.57
GDPD3-204ENST00000566434 C19orf44Q9H6X5 657 aa18.6■□□□□ 0.57
GDPD3-204ENST00000566434 NALCNQ8IZF0 1738 aa18.6■□□□□ 0.57
GDPD3-204ENST00000566434 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.6■□□□□ 0.57
GDPD3-204ENST00000566434 ADGRB1O14514 1584 aa18.59■□□□□ 0.57
GDPD3-204ENST00000566434 TECPR2O15040 1411 aa18.59■□□□□ 0.57
GDPD3-204ENST00000566434 ADGRL3Q9HAR2 1447 aa18.59■□□□□ 0.57
GDPD3-204ENST00000566434 CLSPNQ9HAW4 1339 aa18.58■□□□□ 0.57
GDPD3-204ENST00000566434 CADPS2Q86UW7 1296 aa18.57■□□□□ 0.56
GDPD3-204ENST00000566434 WAPLQ7Z5K2 1190 aa18.56■□□□□ 0.56
GDPD3-204ENST00000566434 TRAK1Q9UPV9 953 aa18.56■□□□□ 0.56
GDPD3-204ENST00000566434 DCCP43146 1447 aa18.56■□□□□ 0.56
GDPD3-204ENST00000566434 POGKQ9P215 609 aa18.55■□□□□ 0.56
GDPD3-204ENST00000566434 PLEKHH1Q9ULM0 1364 aa18.55■□□□□ 0.56
GDPD3-204ENST00000566434 DLC1Q96QB1 1528 aa18.54■□□□□ 0.56
GDPD3-204ENST00000566434 TRPM1Q7Z4N2 1603 aa18.54■□□□□ 0.56
GDPD3-204ENST00000566434 FAM135BQ49AJ0 1406 aa18.54■□□□□ 0.56
GDPD3-204ENST00000566434 SAFB2Q14151 953 aaKnown RBP eCLIP18.53■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms