RNA–Protein interactions for RNA: ENST00000566398.1

CPNE7-208, Transcript of copine 7, humanhuman

TSL 3

Gene CPNE7, Length 672 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE7-208ENST00000566398 ABCF1Q8NE71 845 aaKnown RBP eCLIP28.49■■■□□ 2.15
CPNE7-208ENST00000566398 SLC26A8Q96RN1 970 aa28.49■■■□□ 2.15
CPNE7-208ENST00000566398 TOM1O60784 492 aa28.46■■■□□ 2.15
CPNE7-208ENST00000566398 SPHKAPQ2M3C7 1700 aa28.46■■■□□ 2.15
CPNE7-208ENST00000566398 STRCP1A6NGW2 1772 aa28.45■■■□□ 2.15
CPNE7-208ENST00000566398 SLC4A1APQ9BWU0 796 aaKnown RBP28.45■■■□□ 2.14
CPNE7-208ENST00000566398 TRPM2O94759 1503 aa28.43■■■□□ 2.14
CPNE7-208ENST00000566398 SENP3Q9H4L4 574 aaPredicted RBP28.43■■■□□ 2.14
CPNE7-208ENST00000566398 KCNA6P17658 529 aa28.42■■■□□ 2.14
CPNE7-208ENST00000566398 SCAF1Q9H7N4 1312 aaKnown RBP28.42■■■□□ 2.14
CPNE7-208ENST00000566398 MYO5BQ9ULV0 1848 aa28.41■■■□□ 2.14
CPNE7-208ENST00000566398 NUTM2DQ5VT03 806 aaPredicted RBP28.41■■■□□ 2.14
CPNE7-208ENST00000566398 PIP4K2BP78356 416 aa28.4■■■□□ 2.14
CPNE7-208ENST00000566398 ZNF326Q5BKZ1 582 aaKnown RBP28.37■■■□□ 2.13
CPNE7-208ENST00000566398 CLTCL1P53675 1640 aa28.36■■■□□ 2.13
CPNE7-208ENST00000566398 NKTRP30414 1462 aaKnown RBP28.35■■■□□ 2.13
CPNE7-208ENST00000566398 NWD1Q149M9 1564 aa28.34■■■□□ 2.13
CPNE7-208ENST00000566398 TBX22Q9Y458 520 aa28.34■■■□□ 2.13
CPNE7-208ENST00000566398 TMEM94Q12767 1356 aa28.34■■■□□ 2.13
CPNE7-208ENST00000566398 ADAMTS13Q76LX8 1427 aa28.33■■■□□ 2.13
CPNE7-208ENST00000566398 DIP2AQ14689 1571 aa28.32■■■□□ 2.12
CPNE7-208ENST00000566398 PROSER2Q86WR7 435 aaPredicted RBP28.31■■■□□ 2.12
CPNE7-208ENST00000566398 SETD5Q9C0A6 1442 aa28.31■■■□□ 2.12
CPNE7-208ENST00000566398 ALKQ9UM73 1620 aa28.31■■■□□ 2.12
CPNE7-208ENST00000566398 ACIN1Q9UKV3 1341 aaKnown RBP28.3■■■□□ 2.12
CPNE7-208ENST00000566398 PIK3R4Q99570 1358 aa28.27■■■□□ 2.12
CPNE7-208ENST00000566398 FOXD1Q16676 465 aa28.27■■■□□ 2.12
CPNE7-208ENST00000566398 MPHOSPH9Q99550 1183 aa28.27■■■□□ 2.12
CPNE7-208ENST00000566398 RBM33Q96EV2 1170 aaKnown RBP28.25■■■□□ 2.11
CPNE7-208ENST00000566398 NEXMIFQ5QGS0 1516 aa28.24■■■□□ 2.11
CPNE7-208ENST00000566398 HSPA1LP34931 641 aa28.24■■■□□ 2.11
CPNE7-208ENST00000566398 SETBP1Q9Y6X0 1596 aa28.23■■■□□ 2.11
CPNE7-208ENST00000566398 RAB3GAP2Q9H2M9 1393 aa28.22■■■□□ 2.11
CPNE7-208ENST00000566398 CCDC144AA2RUR9 1427 aa28.21■■■□□ 2.11
CPNE7-208ENST00000566398 MSH6P52701 1360 aa28.2■■■□□ 2.1
CPNE7-208ENST00000566398 XIRP1Q702N8 1843 aaKnown RBP28.19■■■□□ 2.1
CPNE7-208ENST00000566398 KIF1BO60333 1816 aa28.18■■■□□ 2.1
CPNE7-208ENST00000566398 RPGRIP1LQ68CZ1 1315 aa28.18■■■□□ 2.1
CPNE7-208ENST00000566398 CHD2O14647 1828 aaKnown RBP28.17■■■□□ 2.1
CPNE7-208ENST00000566398 NRXN3Q9Y4C0 1643 aa28.17■■■□□ 2.1
CPNE7-208ENST00000566398 VGFO15240 615 aaPredicted RBP28.16■■■□□ 2.1
CPNE7-208ENST00000566398 AMOTL2Q9Y2J4 779 aa28.15■■■□□ 2.1
CPNE7-208ENST00000566398 PTPRUQ92729 1446 aa28.15■■■□□ 2.1
CPNE7-208ENST00000566398 NCOA3Q9Y6Q9 1424 aa28.15■■■□□ 2.1
CPNE7-208ENST00000566398 DISP3Q9P2K9 1392 aa28.14■■■□□ 2.1
CPNE7-208ENST00000566398 C14orf37Q86TY3 774 aa28.13■■■□□ 2.09
CPNE7-208ENST00000566398 METP08581 1390 aa28.12■■■□□ 2.09
CPNE7-208ENST00000566398 FAM135BQ49AJ0 1406 aa28.1■■■□□ 2.09
CPNE7-208ENST00000566398 SPATA31E1Q6ZUB1 1445 aa28.08■■■□□ 2.09
CPNE7-208ENST00000566398 XRN1Q8IZH2 1706 aaKnown RBP28.06■■■□□ 2.08
CPNE7-208ENST00000566398 RGL3Q3MIN7 710 aa28.05■■■□□ 2.08
CPNE7-208ENST00000566398 C19orf44Q9H6X5 657 aa28.04■■■□□ 2.08
CPNE7-208ENST00000566398 SLAIN2Q9P270 581 aa28.03■■■□□ 2.08
CPNE7-208ENST00000566398 HRCP23327 699 aa28.02■■■□□ 2.08
CPNE7-208ENST00000566398 CADPS2Q86UW7 1296 aa28.02■■■□□ 2.08
CPNE7-208ENST00000566398 ANKRD30BQ9BXX2 1392 aa28.01■■■□□ 2.07
CPNE7-208ENST00000566398 ATF3P18847 181 aa28.01■■■□□ 2.07
CPNE7-208ENST00000566398 PPLO60437 1756 aa28■■■□□ 2.07
CPNE7-208ENST00000566398 ROBO1Q9Y6N7 1651 aa27.98■■■□□ 2.07
CPNE7-208ENST00000566398 ADGRF5Q8IZF2 1346 aa27.97■■■□□ 2.07
CPNE7-208ENST00000566398 DCCP43146 1447 aa27.97■■■□□ 2.07
CPNE7-208ENST00000566398 PTCH1Q13635 1447 aa27.96■■■□□ 2.07
CPNE7-208ENST00000566398 MED1Q15648 1581 aaPredicted RBP27.94■■■□□ 2.06
CPNE7-208ENST00000566398 SIPA1L2Q9P2F8 1722 aaPredicted RBP27.93■■■□□ 2.06
CPNE7-208ENST00000566398 PRAG1Q86YV5 1406 aa27.92■■■□□ 2.06
CPNE7-208ENST00000566398 ADGRL3Q9HAR2 1447 aa27.92■■■□□ 2.06
CPNE7-208ENST00000566398 SETD1AO15047 1707 aaKnown RBP27.92■■■□□ 2.06
CPNE7-208ENST00000566398 ROBO2Q9HCK4 1378 aa27.91■■■□□ 2.06
CPNE7-208ENST00000566398 PIK3C2GO75747 1445 aa27.9■■■□□ 2.06
CPNE7-208ENST00000566398 IFT172Q9UG01 1749 aa27.88■■■□□ 2.05
CPNE7-208ENST00000566398 MYOM2P54296 1465 aa27.86■■■□□ 2.05
CPNE7-208ENST00000566398 ILDR2Q71H61 639 aa27.84■■■□□ 2.05
CPNE7-208ENST00000566398 MST1RQ04912 1400 aa27.84■■■□□ 2.05
CPNE7-208ENST00000566398 BRINP3Q76B58 766 aa27.82■■■□□ 2.04
CPNE7-208ENST00000566398 PHF23Q9BUL5 403 aaPredicted RBP27.82■■■□□ 2.04
CPNE7-208ENST00000566398 NRXN1Q9ULB1 1477 aa27.82■■■□□ 2.04
CPNE7-208ENST00000566398 LRPPRCP42704 1394 aaKnown RBP27.81■■■□□ 2.04
CPNE7-208ENST00000566398 NALCNQ8IZF0 1738 aa27.81■■■□□ 2.04
CPNE7-208ENST00000566398 STK26Q9P289 416 aa27.8■■■□□ 2.04
CPNE7-208ENST00000566398 TECPR2O15040 1411 aa27.8■■■□□ 2.04
CPNE7-208ENST00000566398 PHLPP1O60346 1717 aa27.79■■■□□ 2.04
CPNE7-208ENST00000566398 ASXL1Q8IXJ9 1541 aa27.79■■■□□ 2.04
CPNE7-208ENST00000566398 AHDC1Q5TGY3 1603 aaPredicted RBP27.78■■■□□ 2.04
CPNE7-208ENST00000566398 JCADQ9P266 1359 aa27.78■■■□□ 2.04
CPNE7-208ENST00000566398 TMEM132EQ6IEE7 984 aa27.78■■■□□ 2.04
CPNE7-208ENST00000566398 C14orf93Q9H972 538 aaKnown RBP27.77■■■□□ 2.04
CPNE7-208ENST00000566398 ABCC11Q96J66 1382 aa27.76■■■□□ 2.03
CPNE7-208ENST00000566398 COL16A1Q07092 1604 aaPredicted RBP27.75■■■□□ 2.03
CPNE7-208ENST00000566398 YTHDC2Q9H6S0 1430 aaKnown RBP27.75■■■□□ 2.03
CPNE7-208ENST00000566398 CFAP70Q5T0N1 1121 aa27.74■■■□□ 2.03
CPNE7-208ENST00000566398 C1orf167Q5SNV9 1468 aa27.72■■■□□ 2.03
CPNE7-208ENST00000566398 LAMC1P11047 1609 aa27.72■■■□□ 2.03
CPNE7-208ENST00000566398 DCAF11Q8TEB1 546 aa27.71■■■□□ 2.03
CPNE7-208ENST00000566398 WAPLQ7Z5K2 1190 aa27.7■■■□□ 2.02
CPNE7-208ENST00000566398 DHX57Q6P158 1386 aaKnown RBP27.7■■■□□ 2.02
CPNE7-208ENST00000566398 STAC3Q96MF2 364 aa27.69■■■□□ 2.02
CPNE7-208ENST00000566398 KDM2AQ9Y2K7 1162 aa27.69■■■□□ 2.02
CPNE7-208ENST00000566398 CDC42BPGQ6DT37 1551 aa27.69■■■□□ 2.02
CPNE7-208ENST00000566398 KNDC1Q76NI1 1749 aa27.68■■■□□ 2.02
CPNE7-208ENST00000566398 PLEKHH1Q9ULM0 1364 aa27.68■■■□□ 2.02
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms