RNA–Protein interactions for RNA: ENST00000566371.5

SPG7-214, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 3

Gene SPG7, Length 581 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-214ENST00000566371 PLEKHG1Q9ULL1 1385 aa32.33■■■□□ 2.77
SPG7-214ENST00000566371 ACIN1Q9UKV3 1341 aaKnown RBP32.33■■■□□ 2.77
SPG7-214ENST00000566371 ABCF1Q8NE71 845 aaKnown RBP eCLIP32.33■■■□□ 2.77
SPG7-214ENST00000566371 CLTCL1P53675 1640 aa32.32■■■□□ 2.76
SPG7-214ENST00000566371 PPP1R15AO75807 674 aaPredicted RBP32.3■■■□□ 2.76
SPG7-214ENST00000566371 SETD5Q9C0A6 1442 aa32.29■■■□□ 2.76
SPG7-214ENST00000566371 LRRC7Q96NW7 1537 aa32.29■■■□□ 2.76
SPG7-214ENST00000566371 UBAP1LF5GYI3 381 aa32.25■■■□□ 2.75
SPG7-214ENST00000566371 SLC26A8Q96RN1 970 aa32.25■■■□□ 2.75
SPG7-214ENST00000566371 BCANQ96GW7 911 aa32.23■■■□□ 2.75
SPG7-214ENST00000566371 KIF1BO60333 1816 aa32.23■■■□□ 2.75
SPG7-214ENST00000566371 NWD1Q149M9 1564 aa32.21■■■□□ 2.75
SPG7-214ENST00000566371 DIP2AQ14689 1571 aa32.2■■■□□ 2.75
SPG7-214ENST00000566371 KCNA6P17658 529 aa32.2■■■□□ 2.75
SPG7-214ENST00000566371 MPHOSPH9Q99550 1183 aa32.18■■■□□ 2.74
SPG7-214ENST00000566371 NUTM2DQ5VT03 806 aaPredicted RBP32.17■■■□□ 2.74
SPG7-214ENST00000566371 TBX22Q9Y458 520 aa32.17■■■□□ 2.74
SPG7-214ENST00000566371 NKTRP30414 1462 aaKnown RBP32.16■■■□□ 2.74
SPG7-214ENST00000566371 ZNF326Q5BKZ1 582 aaKnown RBP32.16■■■□□ 2.74
SPG7-214ENST00000566371 RAB3GAP2Q9H2M9 1393 aa32.16■■■□□ 2.74
SPG7-214ENST00000566371 ADAMTS13Q76LX8 1427 aa32.16■■■□□ 2.74
SPG7-214ENST00000566371 TOM1O60784 492 aa32.15■■■□□ 2.74
SPG7-214ENST00000566371 NEXMIFQ5QGS0 1516 aa32.15■■■□□ 2.74
SPG7-214ENST00000566371 XIRP1Q702N8 1843 aaKnown RBP32.14■■■□□ 2.74
SPG7-214ENST00000566371 CHD2O14647 1828 aaKnown RBP32.13■■■□□ 2.73
SPG7-214ENST00000566371 SETBP1Q9Y6X0 1596 aa32.12■■■□□ 2.73
SPG7-214ENST00000566371 FOXD1Q16676 465 aa32.12■■■□□ 2.73
SPG7-214ENST00000566371 SENP3Q9H4L4 574 aaPredicted RBP32.11■■■□□ 2.73
SPG7-214ENST00000566371 PIK3R4Q99570 1358 aa32.1■■■□□ 2.73
SPG7-214ENST00000566371 ALKQ9UM73 1620 aa32.1■■■□□ 2.73
SPG7-214ENST00000566371 NRXN3Q9Y4C0 1643 aa32.09■■■□□ 2.73
SPG7-214ENST00000566371 CCDC144AA2RUR9 1427 aa32.09■■■□□ 2.73
SPG7-214ENST00000566371 TMEM94Q12767 1356 aa32.07■■■□□ 2.72
SPG7-214ENST00000566371 RPGRIP1LQ68CZ1 1315 aa32.05■■■□□ 2.72
SPG7-214ENST00000566371 HRCP23327 699 aa32.04■■■□□ 2.72
SPG7-214ENST00000566371 PROSER2Q86WR7 435 aaPredicted RBP32.04■■■□□ 2.72
SPG7-214ENST00000566371 PIP4K2BP78356 416 aa32.01■■■□□ 2.71
SPG7-214ENST00000566371 PPLO60437 1756 aa32■■■□□ 2.71
SPG7-214ENST00000566371 VGFO15240 615 aaPredicted RBP31.99■■■□□ 2.71
SPG7-214ENST00000566371 SPATA31E1Q6ZUB1 1445 aa31.99■■■□□ 2.71
SPG7-214ENST00000566371 SCAF1Q9H7N4 1312 aaKnown RBP31.99■■■□□ 2.71
SPG7-214ENST00000566371 NCOA3Q9Y6Q9 1424 aa31.95■■■□□ 2.71
SPG7-214ENST00000566371 XRN1Q8IZH2 1706 aaKnown RBP31.94■■■□□ 2.7
SPG7-214ENST00000566371 PTPRUQ92729 1446 aa31.93■■■□□ 2.7
SPG7-214ENST00000566371 RBM33Q96EV2 1170 aaKnown RBP31.91■■■□□ 2.7
SPG7-214ENST00000566371 AMOTL2Q9Y2J4 779 aa31.91■■■□□ 2.7
SPG7-214ENST00000566371 METP08581 1390 aa31.91■■■□□ 2.7
SPG7-214ENST00000566371 MSH6P52701 1360 aa31.91■■■□□ 2.7
SPG7-214ENST00000566371 IFT172Q9UG01 1749 aa31.89■■■□□ 2.7
SPG7-214ENST00000566371 SETD1AO15047 1707 aaKnown RBP31.89■■■□□ 2.69
SPG7-214ENST00000566371 ANKRD30BQ9BXX2 1392 aa31.87■■■□□ 2.69
SPG7-214ENST00000566371 HSPA1LP34931 641 aa31.87■■■□□ 2.69
SPG7-214ENST00000566371 RGL3Q3MIN7 710 aa31.84■■■□□ 2.69
SPG7-214ENST00000566371 FAM135BQ49AJ0 1406 aa31.83■■■□□ 2.69
SPG7-214ENST00000566371 PRAG1Q86YV5 1406 aa31.78■■■□□ 2.68
SPG7-214ENST00000566371 C14orf37Q86TY3 774 aa31.78■■■□□ 2.68
SPG7-214ENST00000566371 C19orf44Q9H6X5 657 aa31.78■■■□□ 2.68
SPG7-214ENST00000566371 SIPA1L2Q9P2F8 1722 aaPredicted RBP31.78■■■□□ 2.68
SPG7-214ENST00000566371 ADGRF5Q8IZF2 1346 aa31.77■■■□□ 2.68
SPG7-214ENST00000566371 ROBO1Q9Y6N7 1651 aa31.76■■■□□ 2.67
SPG7-214ENST00000566371 PTCH1Q13635 1447 aa31.75■■■□□ 2.67
SPG7-214ENST00000566371 PIK3C2GO75747 1445 aa31.75■■■□□ 2.67
SPG7-214ENST00000566371 SLAIN2Q9P270 581 aa31.74■■■□□ 2.67
SPG7-214ENST00000566371 DCCP43146 1447 aa31.74■■■□□ 2.67
SPG7-214ENST00000566371 MYOM2P54296 1465 aa31.73■■■□□ 2.67
SPG7-214ENST00000566371 CADPS2Q86UW7 1296 aa31.73■■■□□ 2.67
SPG7-214ENST00000566371 NRXN1Q9ULB1 1477 aa31.71■■■□□ 2.67
SPG7-214ENST00000566371 ATF3P18847 181 aa31.7■■■□□ 2.67
SPG7-214ENST00000566371 ADGRL3Q9HAR2 1447 aa31.68■■■□□ 2.66
SPG7-214ENST00000566371 ROBO2Q9HCK4 1378 aa31.66■■■□□ 2.66
SPG7-214ENST00000566371 NALCNQ8IZF0 1738 aa31.65■■■□□ 2.66
SPG7-214ENST00000566371 LAMC1P11047 1609 aa31.64■■■□□ 2.66
SPG7-214ENST00000566371 TECPR2O15040 1411 aa31.62■■■□□ 2.65
SPG7-214ENST00000566371 ASXL1Q8IXJ9 1541 aa31.62■■■□□ 2.65
SPG7-214ENST00000566371 DISP3Q9P2K9 1392 aa31.62■■■□□ 2.65
SPG7-214ENST00000566371 LRPPRCP42704 1394 aaKnown RBP31.59■■■□□ 2.65
SPG7-214ENST00000566371 KNDC1Q76NI1 1749 aa31.59■■■□□ 2.65
SPG7-214ENST00000566371 C14orf93Q9H972 538 aaKnown RBP31.59■■■□□ 2.65
SPG7-214ENST00000566371 STAC3Q96MF2 364 aa31.57■■■□□ 2.64
SPG7-214ENST00000566371 MST1RQ04912 1400 aa31.57■■■□□ 2.64
SPG7-214ENST00000566371 ABCC11Q96J66 1382 aa31.56■■■□□ 2.64
SPG7-214ENST00000566371 MED1Q15648 1581 aaPredicted RBP31.56■■■□□ 2.64
SPG7-214ENST00000566371 PHLPP1O60346 1717 aa31.55■■■□□ 2.64
SPG7-214ENST00000566371 YTHDC2Q9H6S0 1430 aaKnown RBP31.54■■■□□ 2.64
SPG7-214ENST00000566371 TMEM132EQ6IEE7 984 aa31.53■■■□□ 2.64
SPG7-214ENST00000566371 AHDC1Q5TGY3 1603 aaPredicted RBP31.53■■■□□ 2.64
SPG7-214ENST00000566371 CFAP70Q5T0N1 1121 aa31.51■■■□□ 2.63
SPG7-214ENST00000566371 DCAF11Q8TEB1 546 aa31.51■■■□□ 2.63
SPG7-214ENST00000566371 STK26Q9P289 416 aa31.5■■■□□ 2.63
SPG7-214ENST00000566371 DHX57Q6P158 1386 aaKnown RBP31.5■■■□□ 2.63
SPG7-214ENST00000566371 COL16A1Q07092 1604 aaPredicted RBP31.49■■■□□ 2.63
SPG7-214ENST00000566371 BRINP3Q76B58 766 aa31.49■■■□□ 2.63
SPG7-214ENST00000566371 CDC42BPGQ6DT37 1551 aa31.47■■■□□ 2.63
SPG7-214ENST00000566371 SIRT1Q96EB6 747 aa31.46■■■□□ 2.63
SPG7-214ENST00000566371 TRIM26Q12899 539 aaPredicted RBP31.45■■■□□ 2.63
SPG7-214ENST00000566371 KDM2AQ9Y2K7 1162 aa31.45■■■□□ 2.63
SPG7-214ENST00000566371 ADGRB1O14514 1584 aa31.44■■■□□ 2.62
SPG7-214ENST00000566371 C1orf167Q5SNV9 1468 aa31.44■■■□□ 2.62
SPG7-214ENST00000566371 NHSL1Q5SYE7 1610 aa31.42■■■□□ 2.62
SPG7-214ENST00000566371 WAPLQ7Z5K2 1190 aa31.42■■■□□ 2.62
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms