RNA–Protein interactions for RNA: ENST00000566269.6

MSLN-206, Transcript of mesothelin, humanhuman

TSL 3

Gene MSLN, Length 1,068 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSLN-206ENST00000566269 CPS1P31327 1500 aa26.34■■□□□ 1.81
MSLN-206ENST00000566269 BCANQ96GW7 911 aa26.31■■□□□ 1.8
MSLN-206ENST00000566269 SENP3Q9H4L4 574 aaPredicted RBP26.31■■□□□ 1.8
MSLN-206ENST00000566269 RAB3GAP2Q9H2M9 1393 aa26.31■■□□□ 1.8
MSLN-206ENST00000566269 HDGFP51858 240 aaKnown RBP26.3■■□□□ 1.8
MSLN-206ENST00000566269 STRCP1A6NGW2 1772 aa26.28■■□□□ 1.8
MSLN-206ENST00000566269 FOXD1Q16676 465 aa26.28■■□□□ 1.8
MSLN-206ENST00000566269 ABCF1Q8NE71 845 aaKnown RBP eCLIP26.28■■□□□ 1.8
MSLN-206ENST00000566269 KIF1BO60333 1816 aa26.28■■□□□ 1.8
MSLN-206ENST00000566269 ZNF326Q5BKZ1 582 aaKnown RBP26.27■■□□□ 1.8
MSLN-206ENST00000566269 NUTM2DQ5VT03 806 aaPredicted RBP26.27■■□□□ 1.8
MSLN-206ENST00000566269 MPHOSPH9Q99550 1183 aa26.27■■□□□ 1.8
MSLN-206ENST00000566269 PLEKHG1Q9ULL1 1385 aa26.27■■□□□ 1.8
MSLN-206ENST00000566269 ACIN1Q9UKV3 1341 aaKnown RBP26.26■■□□□ 1.79
MSLN-206ENST00000566269 SLC26A8Q96RN1 970 aa26.26■■□□□ 1.79
MSLN-206ENST00000566269 LRRC7Q96NW7 1537 aa26.19■■□□□ 1.78
MSLN-206ENST00000566269 CCDC144AA2RUR9 1427 aa26.18■■□□□ 1.78
MSLN-206ENST00000566269 UBAP1LF5GYI3 381 aa26.17■■□□□ 1.78
MSLN-206ENST00000566269 NEXMIFQ5QGS0 1516 aa26.17■■□□□ 1.78
MSLN-206ENST00000566269 DIP2AQ14689 1571 aa26.16■■□□□ 1.78
MSLN-206ENST00000566269 NWD1Q149M9 1564 aa26.14■■□□□ 1.78
MSLN-206ENST00000566269 ADAMTS13Q76LX8 1427 aa26.14■■□□□ 1.77
MSLN-206ENST00000566269 KCNA6P17658 529 aa26.13■■□□□ 1.77
MSLN-206ENST00000566269 TBX22Q9Y458 520 aa26.1■■□□□ 1.77
MSLN-206ENST00000566269 SETBP1Q9Y6X0 1596 aa26.1■■□□□ 1.77
MSLN-206ENST00000566269 NKTRP30414 1462 aaKnown RBP26.1■■□□□ 1.77
MSLN-206ENST00000566269 NRXN3Q9Y4C0 1643 aa26.1■■□□□ 1.77
MSLN-206ENST00000566269 CHD2O14647 1828 aaKnown RBP26.09■■□□□ 1.77
MSLN-206ENST00000566269 XIRP1Q702N8 1843 aaKnown RBP26.08■■□□□ 1.77
MSLN-206ENST00000566269 HRCP23327 699 aa26.07■■□□□ 1.76
MSLN-206ENST00000566269 PPLO60437 1756 aa26.06■■□□□ 1.76
MSLN-206ENST00000566269 TOM1O60784 492 aa26.06■■□□□ 1.76
MSLN-206ENST00000566269 SCAF1Q9H7N4 1312 aaKnown RBP26.06■■□□□ 1.76
MSLN-206ENST00000566269 TMEM94Q12767 1356 aa26.06■■□□□ 1.76
MSLN-206ENST00000566269 PROSER2Q86WR7 435 aaPredicted RBP26.05■■□□□ 1.76
MSLN-206ENST00000566269 RPGRIP1LQ68CZ1 1315 aa26.05■■□□□ 1.76
MSLN-206ENST00000566269 SPATA31E1Q6ZUB1 1445 aa26.04■■□□□ 1.76
MSLN-206ENST00000566269 PIP4K2BP78356 416 aa26.03■■□□□ 1.76
MSLN-206ENST00000566269 RGL3Q3MIN7 710 aa26.03■■□□□ 1.76
MSLN-206ENST00000566269 PIK3R4Q99570 1358 aa26.03■■□□□ 1.76
MSLN-206ENST00000566269 VGFO15240 615 aaPredicted RBP26.02■■□□□ 1.76
MSLN-206ENST00000566269 RBM33Q96EV2 1170 aaKnown RBP26.02■■□□□ 1.76
MSLN-206ENST00000566269 ALKQ9UM73 1620 aa26■■□□□ 1.75
MSLN-206ENST00000566269 PTPRUQ92729 1446 aa25.97■■□□□ 1.75
MSLN-206ENST00000566269 IFT172Q9UG01 1749 aa25.97■■□□□ 1.75
MSLN-206ENST00000566269 METP08581 1390 aa25.96■■□□□ 1.75
MSLN-206ENST00000566269 ANKRD30BQ9BXX2 1392 aa25.96■■□□□ 1.75
MSLN-206ENST00000566269 AMOTL2Q9Y2J4 779 aa25.96■■□□□ 1.75
MSLN-206ENST00000566269 XRN1Q8IZH2 1706 aaKnown RBP25.95■■□□□ 1.74
MSLN-206ENST00000566269 SETD1AO15047 1707 aaKnown RBP25.93■■□□□ 1.74
MSLN-206ENST00000566269 MSH6P52701 1360 aa25.93■■□□□ 1.74
MSLN-206ENST00000566269 C14orf37Q86TY3 774 aa25.92■■□□□ 1.74
MSLN-206ENST00000566269 ADGRF5Q8IZF2 1346 aa25.9■■□□□ 1.74
MSLN-206ENST00000566269 NCOA3Q9Y6Q9 1424 aa25.87■■□□□ 1.73
MSLN-206ENST00000566269 PIK3C2GO75747 1445 aa25.85■■□□□ 1.73
MSLN-206ENST00000566269 HSPA1LP34931 641 aa25.84■■□□□ 1.73
MSLN-206ENST00000566269 MYOM2P54296 1465 aa25.84■■□□□ 1.73
MSLN-206ENST00000566269 TRIM26Q12899 539 aaPredicted RBP25.83■■□□□ 1.73
MSLN-206ENST00000566269 SIPA1L2Q9P2F8 1722 aaPredicted RBP25.82■■□□□ 1.72
MSLN-206ENST00000566269 PTCH1Q13635 1447 aa25.8■■□□□ 1.72
MSLN-206ENST00000566269 ROBO1Q9Y6N7 1651 aa25.79■■□□□ 1.72
MSLN-206ENST00000566269 NRXN1Q9ULB1 1477 aa25.79■■□□□ 1.72
MSLN-206ENST00000566269 C19orf44Q9H6X5 657 aa25.78■■□□□ 1.72
MSLN-206ENST00000566269 ATF3P18847 181 aa25.77■■□□□ 1.72
MSLN-206ENST00000566269 ROBO2Q9HCK4 1378 aa25.77■■□□□ 1.72
MSLN-206ENST00000566269 FAM135BQ49AJ0 1406 aa25.77■■□□□ 1.72
MSLN-206ENST00000566269 ASXL1Q8IXJ9 1541 aa25.77■■□□□ 1.72
MSLN-206ENST00000566269 LAMC1P11047 1609 aa25.76■■□□□ 1.71
MSLN-206ENST00000566269 NALCNQ8IZF0 1738 aa25.76■■□□□ 1.71
MSLN-206ENST00000566269 PRAG1Q86YV5 1406 aa25.75■■□□□ 1.71
MSLN-206ENST00000566269 ADGRL3Q9HAR2 1447 aa25.75■■□□□ 1.71
MSLN-206ENST00000566269 CADPS2Q86UW7 1296 aa25.75■■□□□ 1.71
MSLN-206ENST00000566269 SLAIN2Q9P270 581 aa25.75■■□□□ 1.71
MSLN-206ENST00000566269 DCAF11Q8TEB1 546 aa25.74■■□□□ 1.71
MSLN-206ENST00000566269 DCCP43146 1447 aa25.73■■□□□ 1.71
MSLN-206ENST00000566269 STK26Q9P289 416 aa25.73■■□□□ 1.71
MSLN-206ENST00000566269 KDM2AQ9Y2K7 1162 aa25.73■■□□□ 1.71
MSLN-206ENST00000566269 TMEM132EQ6IEE7 984 aa25.72■■□□□ 1.71
MSLN-206ENST00000566269 LRPPRCP42704 1394 aaKnown RBP25.71■■□□□ 1.71
MSLN-206ENST00000566269 CFAP70Q5T0N1 1121 aa25.7■■□□□ 1.7
MSLN-206ENST00000566269 C14orf93Q9H972 538 aaKnown RBP25.7■■□□□ 1.7
MSLN-206ENST00000566269 KNDC1Q76NI1 1749 aa25.7■■□□□ 1.7
MSLN-206ENST00000566269 DHX57Q6P158 1386 aaKnown RBP25.69■■□□□ 1.7
MSLN-206ENST00000566269 YTHDC2Q9H6S0 1430 aaKnown RBP25.69■■□□□ 1.7
MSLN-206ENST00000566269 TECPR2O15040 1411 aa25.68■■□□□ 1.7
MSLN-206ENST00000566269 ABCC11Q96J66 1382 aa25.65■■□□□ 1.7
MSLN-206ENST00000566269 MST1RQ04912 1400 aa25.64■■□□□ 1.7
MSLN-206ENST00000566269 STAC3Q96MF2 364 aa25.64■■□□□ 1.7
MSLN-206ENST00000566269 PHLPP1O60346 1717 aa25.63■■□□□ 1.69
MSLN-206ENST00000566269 DISP3Q9P2K9 1392 aa25.61■■□□□ 1.69
MSLN-206ENST00000566269 WAPLQ7Z5K2 1190 aa25.61■■□□□ 1.69
MSLN-206ENST00000566269 ADGRB1O14514 1584 aa25.61■■□□□ 1.69
MSLN-206ENST00000566269 PLEKHH1Q9ULM0 1364 aa25.6■■□□□ 1.69
MSLN-206ENST00000566269 SIN3AQ96ST3 1273 aa25.59■■□□□ 1.69
MSLN-206ENST00000566269 CDC42BPGQ6DT37 1551 aa25.58■■□□□ 1.69
MSLN-206ENST00000566269 BRINP3Q76B58 766 aa25.58■■□□□ 1.69
MSLN-206ENST00000566269 MED1Q15648 1581 aaPredicted RBP25.57■■□□□ 1.68
MSLN-206ENST00000566269 NEUROD1Q13562 356 aa25.57■■□□□ 1.68
MSLN-206ENST00000566269 AHDC1Q5TGY3 1603 aaPredicted RBP25.56■■□□□ 1.68
MSLN-206ENST00000566269 C1orf167Q5SNV9 1468 aa25.55■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms