RNA–Protein interactions for RNA: ENST00000565887.1

SHCBP1-204, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 5

Gene SHCBP1, Length 603 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-204ENST00000565887 KIF1BO60333 1816 aa18.42■□□□□ 0.54
SHCBP1-204ENST00000565887 VGFO15240 615 aaPredicted RBP18.41■□□□□ 0.54
SHCBP1-204ENST00000565887 ANKRD30BQ9BXX2 1392 aa18.41■□□□□ 0.54
SHCBP1-204ENST00000565887 CLTCL1P53675 1640 aa18.4■□□□□ 0.54
SHCBP1-204ENST00000565887 ZFYVE9O95405 1425 aa18.4■□□□□ 0.54
SHCBP1-204ENST00000565887 BCANQ96GW7 911 aa18.39■□□□□ 0.53
SHCBP1-204ENST00000565887 STAC3Q96MF2 364 aa18.37■□□□□ 0.53
SHCBP1-204ENST00000565887 PLEKHG1Q9ULL1 1385 aa18.37■□□□□ 0.53
SHCBP1-204ENST00000565887 NEURL4Q96JN8 1562 aa18.37■□□□□ 0.53
SHCBP1-204ENST00000565887 MYO5BQ9ULV0 1848 aa18.37■□□□□ 0.53
SHCBP1-204ENST00000565887 PCGF6Q9BYE7 350 aa18.36■□□□□ 0.53
SHCBP1-204ENST00000565887 IQGAP1P46940 1657 aa18.35■□□□□ 0.53
SHCBP1-204ENST00000565887 TBX22Q9Y458 520 aa18.35■□□□□ 0.53
SHCBP1-204ENST00000565887 RGL3Q3MIN7 710 aa18.34■□□□□ 0.53
SHCBP1-204ENST00000565887 SPATA31E1Q6ZUB1 1445 aa18.32■□□□□ 0.52
SHCBP1-204ENST00000565887 NUTM2DQ5VT03 806 aaPredicted RBP18.31■□□□□ 0.52
SHCBP1-204ENST00000565887 SLC26A8Q96RN1 970 aa18.3■□□□□ 0.52
SHCBP1-204ENST00000565887 ZNF335Q9H4Z2 1342 aaPredicted RBP18.29■□□□□ 0.52
SHCBP1-204ENST00000565887 CERKQ8TCT0 537 aa18.29■□□□□ 0.52
SHCBP1-204ENST00000565887 PIK3R4Q99570 1358 aa18.29■□□□□ 0.52
SHCBP1-204ENST00000565887 KCNA6P17658 529 aa18.28■□□□□ 0.52
SHCBP1-204ENST00000565887 NEXMIFQ5QGS0 1516 aa18.28■□□□□ 0.52
SHCBP1-204ENST00000565887 DHX57Q6P158 1386 aaKnown RBP18.27■□□□□ 0.51
SHCBP1-204ENST00000565887 DIP2AQ14689 1571 aa18.25■□□□□ 0.51
SHCBP1-204ENST00000565887 CPS1P31327 1500 aa18.25■□□□□ 0.51
SHCBP1-204ENST00000565887 LTBP4Q8N2S1 1624 aa18.23■□□□□ 0.51
SHCBP1-204ENST00000565887 SETBP1Q9Y6X0 1596 aa18.23■□□□□ 0.51
SHCBP1-204ENST00000565887 ADAMTS13Q76LX8 1427 aa18.23■□□□□ 0.51
SHCBP1-204ENST00000565887 PPLO60437 1756 aa18.22■□□□□ 0.51
SHCBP1-204ENST00000565887 IQSEC2Q5JU85 1478 aa18.22■□□□□ 0.51
SHCBP1-204ENST00000565887 DCAF11Q8TEB1 546 aa18.22■□□□□ 0.51
SHCBP1-204ENST00000565887 ADGRF5Q8IZF2 1346 aa18.21■□□□□ 0.51
SHCBP1-204ENST00000565887 CLSPNQ9HAW4 1339 aa18.2■□□□□ 0.5
SHCBP1-204ENST00000565887 PROSER2Q86WR7 435 aaPredicted RBP18.19■□□□□ 0.5
SHCBP1-204ENST00000565887 SENP3Q9H4L4 574 aaPredicted RBP18.19■□□□□ 0.5
SHCBP1-204ENST00000565887 AMOTL2Q9Y2J4 779 aa18.18■□□□□ 0.5
SHCBP1-204ENST00000565887 MYOM2P54296 1465 aa18.18■□□□□ 0.5
SHCBP1-204ENST00000565887 NEUROD1Q13562 356 aa18.17■□□□□ 0.5
SHCBP1-204ENST00000565887 C14orf93Q9H972 538 aaKnown RBP18.17■□□□□ 0.5
SHCBP1-204ENST00000565887 KDM2AQ9Y2K7 1162 aa18.17■□□□□ 0.5
SHCBP1-204ENST00000565887 IFT172Q9UG01 1749 aa18.16■□□□□ 0.5
SHCBP1-204ENST00000565887 SIN3AQ96ST3 1273 aa18.16■□□□□ 0.5
SHCBP1-204ENST00000565887 CHD2O14647 1828 aaKnown RBP18.16■□□□□ 0.5
SHCBP1-204ENST00000565887 NCOA3Q9Y6Q9 1424 aa18.15■□□□□ 0.5
SHCBP1-204ENST00000565887 NKTRP30414 1462 aaKnown RBP18.15■□□□□ 0.5
SHCBP1-204ENST00000565887 ALKQ9UM73 1620 aa18.15■□□□□ 0.5
SHCBP1-204ENST00000565887 PIK3C2GO75747 1445 aa18.15■□□□□ 0.5
SHCBP1-204ENST00000565887 NRXN1Q9ULB1 1477 aa18.14■□□□□ 0.5
SHCBP1-204ENST00000565887 FBXO41Q8TF61 875 aa18.14■□□□□ 0.49
SHCBP1-204ENST00000565887 METP08581 1390 aa18.14■□□□□ 0.49
SHCBP1-204ENST00000565887 NRXN3Q9Y4C0 1643 aa18.13■□□□□ 0.49
SHCBP1-204ENST00000565887 TOM1O60784 492 aa18.13■□□□□ 0.49
SHCBP1-204ENST00000565887 LRRC7Q96NW7 1537 aa18.13■□□□□ 0.49
SHCBP1-204ENST00000565887 NWD1Q149M9 1564 aa18.12■□□□□ 0.49
SHCBP1-204ENST00000565887 L3MBTL2Q969R5 705 aa18.11■□□□□ 0.49
SHCBP1-204ENST00000565887 STRCP1A6NGW2 1772 aa18.1■□□□□ 0.49
SHCBP1-204ENST00000565887 CFAP70Q5T0N1 1121 aa18.1■□□□□ 0.49
SHCBP1-204ENST00000565887 SIRT1Q96EB6 747 aa18.1■□□□□ 0.49
SHCBP1-204ENST00000565887 TIMELESSQ9UNS1 1208 aa18.1■□□□□ 0.49
SHCBP1-204ENST00000565887 TMEM94Q12767 1356 aa18.09■□□□□ 0.49
SHCBP1-204ENST00000565887 PTPRUQ92729 1446 aa18.08■□□□□ 0.49
SHCBP1-204ENST00000565887 CCER1Q8TC90 406 aaPredicted RBP18.08■□□□□ 0.48
SHCBP1-204ENST00000565887 C19orf44Q9H6X5 657 aa18.08■□□□□ 0.48
SHCBP1-204ENST00000565887 TONSLQ96HA7 1378 aa18.07■□□□□ 0.48
SHCBP1-204ENST00000565887 ABCC11Q96J66 1382 aa18.07■□□□□ 0.48
SHCBP1-204ENST00000565887 UBAP1LF5GYI3 381 aa18.07■□□□□ 0.48
SHCBP1-204ENST00000565887 C14orf37Q86TY3 774 aa18.07■□□□□ 0.48
SHCBP1-204ENST00000565887 LAMC1P11047 1609 aa18.07■□□□□ 0.48
SHCBP1-204ENST00000565887 PRAG1Q86YV5 1406 aa18.06■□□□□ 0.48
SHCBP1-204ENST00000565887 LRPPRCP42704 1394 aaKnown RBP18.06■□□□□ 0.48
SHCBP1-204ENST00000565887 TMEM132EQ6IEE7 984 aa18.06■□□□□ 0.48
SHCBP1-204ENST00000565887 MSH6P52701 1360 aa18.05■□□□□ 0.48
SHCBP1-204ENST00000565887 SETD1AO15047 1707 aaKnown RBP18.04■□□□□ 0.48
SHCBP1-204ENST00000565887 PTCH1Q13635 1447 aa18.04■□□□□ 0.48
SHCBP1-204ENST00000565887 CADPS2Q86UW7 1296 aa18.03■□□□□ 0.48
SHCBP1-204ENST00000565887 STK26Q9P289 416 aa18.03■□□□□ 0.48
SHCBP1-204ENST00000565887 YTHDC2Q9H6S0 1430 aaKnown RBP18.03■□□□□ 0.48
SHCBP1-204ENST00000565887 XRN1Q8IZH2 1706 aaKnown RBP18.03■□□□□ 0.48
SHCBP1-204ENST00000565887 TECPR2O15040 1411 aa18.02■□□□□ 0.48
SHCBP1-204ENST00000565887 ATF3P18847 181 aa18.02■□□□□ 0.48
SHCBP1-204ENST00000565887 RBM33Q96EV2 1170 aaKnown RBP18■□□□□ 0.47
SHCBP1-204ENST00000565887 FAM135BQ49AJ0 1406 aa17.99■□□□□ 0.47
SHCBP1-204ENST00000565887 KIAA1210Q9ULL0 1709 aa17.99■□□□□ 0.47
SHCBP1-204ENST00000565887 ROBO2Q9HCK4 1378 aa17.99■□□□□ 0.47
SHCBP1-204ENST00000565887 POGKQ9P215 609 aa17.98■□□□□ 0.47
SHCBP1-204ENST00000565887 SLAIN2Q9P270 581 aa17.98■□□□□ 0.47
SHCBP1-204ENST00000565887 XIRP1Q702N8 1843 aaKnown RBP17.98■□□□□ 0.47
SHCBP1-204ENST00000565887 DCCP43146 1447 aa17.98■□□□□ 0.47
SHCBP1-204ENST00000565887 ILDR1Q86SU0 546 aaPredicted RBP17.96■□□□□ 0.47
SHCBP1-204ENST00000565887 TRAK1Q9UPV9 953 aa17.96■□□□□ 0.47
SHCBP1-204ENST00000565887 DLC1Q96QB1 1528 aa17.95■□□□□ 0.46
SHCBP1-204ENST00000565887 ADGRL3Q9HAR2 1447 aa17.95■□□□□ 0.46
SHCBP1-204ENST00000565887 ADGRB1O14514 1584 aa17.95■□□□□ 0.46
SHCBP1-204ENST00000565887 ASXL1Q8IXJ9 1541 aa17.94■□□□□ 0.46
SHCBP1-204ENST00000565887 PIP4K2BP78356 416 aa17.94■□□□□ 0.46
SHCBP1-204ENST00000565887 NBPF1Q3BBV0 1214 aa17.94■□□□□ 0.46
SHCBP1-204ENST00000565887 WAPLQ7Z5K2 1190 aa17.94■□□□□ 0.46
SHCBP1-204ENST00000565887 KNDC1Q76NI1 1749 aa17.94■□□□□ 0.46
SHCBP1-204ENST00000565887 SCAF1Q9H7N4 1312 aaKnown RBP17.94■□□□□ 0.46
SHCBP1-204ENST00000565887 PRAM1Q96QH2 718 aa17.93■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms