RNA–Protein interactions for RNA: ENST00000565038.1

PALB2-203, Transcript of partner and localizer of BRCA2, humanhuman

TSL 3

Gene PALB2, Length 344 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-203ENST00000565038 RNF166Q96A37 237 aaPredicted RBP9.8□□□□□ -0.84
PALB2-203ENST00000565038 LRCH3Q96II8 777 aa9.8□□□□□ -0.84
PALB2-203ENST00000565038 RNF40O75150 1001 aa9.79□□□□□ -0.84
PALB2-203ENST00000565038 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.79□□□□□ -0.84
PALB2-203ENST00000565038 SOWAHBA6NEL2 793 aa9.77□□□□□ -0.85
PALB2-203ENST00000565038 TTLL12Q14166 644 aaPredicted RBP9.77□□□□□ -0.85
PALB2-203ENST00000565038 THSD4Q6ZMP0 1018 aa9.77□□□□□ -0.85
PALB2-203ENST00000565038 PTPN5P54829 565 aa9.76□□□□□ -0.85
PALB2-203ENST00000565038 PDE4DQ08499 809 aa9.76□□□□□ -0.85
PALB2-203ENST00000565038 REPIN1Q9BWE0 567 aaKnown RBP9.76□□□□□ -0.85
PALB2-203ENST00000565038 DAXXQ9UER7 740 aaPredicted RBP9.76□□□□□ -0.85
PALB2-203ENST00000565038 AMHR2Q16671 573 aa9.75□□□□□ -0.85
PALB2-203ENST00000565038 HPS5Q9UPZ3 1129 aa9.75□□□□□ -0.85
PALB2-203ENST00000565038 CLCN1P35523 988 aa9.74□□□□□ -0.85
PALB2-203ENST00000565038 GPCPD1Q9NPB8 672 aa9.74□□□□□ -0.85
PALB2-203ENST00000565038 DDX11L8A8MPP1 907 aa9.73□□□□□ -0.85
PALB2-203ENST00000565038 SLF2Q8IX21 1173 aa9.73□□□□□ -0.85
PALB2-203ENST00000565038 PARP9Q8IXQ6 854 aa9.73□□□□□ -0.85
PALB2-203ENST00000565038 TMUB1Q9BVT8 246 aa9.73□□□□□ -0.85
PALB2-203ENST00000565038 PLSCR2Q9NRY7 297 aa9.73□□□□□ -0.85
PALB2-203ENST00000565038 SLC4A3P48751 1232 aa9.72□□□□□ -0.85
PALB2-203ENST00000565038 PPP4CP60510 307 aa9.72□□□□□ -0.85
PALB2-203ENST00000565038 WBP1LQ9NX94 342 aa9.72□□□□□ -0.85
PALB2-203ENST00000565038 TSR3Q9UJK0 312 aaKnown RBP9.72□□□□□ -0.85
PALB2-203ENST00000565038 SLC10A3P09131 477 aa9.71□□□□□ -0.86
PALB2-203ENST00000565038 GIGYF2Q6Y7W6 1299 aaKnown RBP9.71□□□□□ -0.86
PALB2-203ENST00000565038 RDH13Q8NBN7 331 aa9.71□□□□□ -0.86
PALB2-203ENST00000565038 GPBP1L1Q9HC44 474 aaPredicted RBP9.69□□□□□ -0.86
PALB2-203ENST00000565038 FAM217BQ9NTX9 383 aaPredicted RBP9.69□□□□□ -0.86
PALB2-203ENST00000565038 SSTR3P32745 418 aaPredicted RBP9.68□□□□□ -0.86
PALB2-203ENST00000565038 SULF1Q8IWU6 871 aa9.68□□□□□ -0.86
PALB2-203ENST00000565038 NEUROD2Q15784 382 aa9.67□□□□□ -0.86
PALB2-203ENST00000565038 RSPH4AQ5TD94 716 aa9.67□□□□□ -0.86
PALB2-203ENST00000565038 HCSTQ9UBK5 93 aa9.67□□□□□ -0.86
PALB2-203ENST00000565038 CFHP08603 1231 aa9.66□□□□□ -0.86
PALB2-203ENST00000565038 MS4A1P11836 297 aa9.65□□□□□ -0.86
PALB2-203ENST00000565038 CD46P15529 392 aa9.65□□□□□ -0.86
PALB2-203ENST00000565038 APLP1P51693 650 aa9.65□□□□□ -0.86
PALB2-203ENST00000565038 BRPF1P55201 1214 aaPredicted RBP9.65□□□□□ -0.86
PALB2-203ENST00000565038 KDM4CQ9H3R0 1056 aa9.65□□□□□ -0.86
PALB2-203ENST00000565038 NECTIN2Q92692 538 aa9.63□□□□□ -0.87
PALB2-203ENST00000565038 GCGRP47871 477 aa9.62□□□□□ -0.87
PALB2-203ENST00000565038 KMT5BQ4FZB7 885 aa9.61□□□□□ -0.87
PALB2-203ENST00000565038 BEGAINQ9BUH8 593 aa9.61□□□□□ -0.87
PALB2-203ENST00000565038 ACTN4O43707 911 aaKnown RBP9.59□□□□□ -0.87
PALB2-203ENST00000565038 NYAP1Q6ZVC0 841 aa9.59□□□□□ -0.87
PALB2-203ENST00000565038 PRR14Q9BWN1 585 aa9.58□□□□□ -0.88
PALB2-203ENST00000565038 FAM117AQ9C073 453 aa9.58□□□□□ -0.88
PALB2-203ENST00000565038 KDM4AO75164 1064 aa9.57□□□□□ -0.88
PALB2-203ENST00000565038 FUT2Q10981 343 aa9.57□□□□□ -0.88
PALB2-203ENST00000565038 PUS10Q3MIT2 529 aaKnown RBP9.57□□□□□ -0.88
PALB2-203ENST00000565038 NUTM1Q86Y26 1132 aa9.57□□□□□ -0.88
PALB2-203ENST00000565038 PCDHB3Q9Y5E6 796 aa9.56□□□□□ -0.88
PALB2-203ENST00000565038 COPS2P61201 443 aa9.55□□□□□ -0.88
PALB2-203ENST00000565038 SPIRE2Q8WWL2 714 aa9.55□□□□□ -0.88
PALB2-203ENST00000565038 BLOC1S3Q6QNY0 202 aa9.54□□□□□ -0.88
PALB2-203ENST00000565038 IL27Q8NEV9 243 aa9.54□□□□□ -0.88
PALB2-203ENST00000565038 MTRQ99707 1265 aa9.54□□□□□ -0.88
PALB2-203ENST00000565038 ATP6V1AP38606 617 aa9.53□□□□□ -0.88
PALB2-203ENST00000565038 HLA-CQ95604 372 aa9.53□□□□□ -0.88
PALB2-203ENST00000565038 TBC1D2Q9BYX2 928 aa9.53□□□□□ -0.88
PALB2-203ENST00000565038 PLEKHG3A1L390 1219 aa9.52□□□□□ -0.89
PALB2-203ENST00000565038 TJAP1Q5JTD0 557 aa9.52□□□□□ -0.89
PALB2-203ENST00000565038 HOXA2O43364 376 aa9.51□□□□□ -0.89
PALB2-203ENST00000565038 NDUFV2P19404 249 aa9.51□□□□□ -0.89
PALB2-203ENST00000565038 GUCA2AQ02747 115 aa9.51□□□□□ -0.89
PALB2-203ENST00000565038 MORN1Q5T089 497 aa9.51□□□□□ -0.89
PALB2-203ENST00000565038 ZNF516Q92618 1163 aa9.51□□□□□ -0.89
PALB2-203ENST00000565038 DDRGK1Q96HY6 314 aa9.51□□□□□ -0.89
PALB2-203ENST00000565038 USP46P62068 366 aa9.5□□□□□ -0.89
PALB2-203ENST00000565038 MOXD2PA6NHM9 499 aa9.49□□□□□ -0.89
PALB2-203ENST00000565038 GRIPAP1Q4V328 841 aa9.49□□□□□ -0.89
PALB2-203ENST00000565038 SCUBE3Q8IX30 993 aa9.49□□□□□ -0.89
PALB2-203ENST00000565038 IL21Q9HBE4 155 aa9.49□□□□□ -0.89
PALB2-203ENST00000565038 SLC27A5Q9Y2P5 690 aa9.49□□□□□ -0.89
PALB2-203ENST00000565038 NR1I2O75469 434 aa9.48□□□□□ -0.89
PALB2-203ENST00000565038 MYSM1Q5VVJ2 828 aa9.47□□□□□ -0.89
PALB2-203ENST00000565038 POLR3EQ9NVU0 708 aa9.47□□□□□ -0.89
PALB2-203ENST00000565038 TLL1O43897 1013 aa9.46□□□□□ -0.9
PALB2-203ENST00000565038 ZPR1O75312 459 aa9.46□□□□□ -0.9
PALB2-203ENST00000565038 ITGBL1O95965 494 aaPredicted RBP9.46□□□□□ -0.9
PALB2-203ENST00000565038 FDX1P10109 184 aa9.46□□□□□ -0.9
PALB2-203ENST00000565038 KCNC4Q03721 635 aa9.46□□□□□ -0.9
PALB2-203ENST00000565038 DIXDC1Q155Q3 683 aa9.46□□□□□ -0.9
PALB2-203ENST00000565038 PLA2G2EQ9NZK7 142 aa9.46□□□□□ -0.9
PALB2-203ENST00000565038 RSBN1LQ6PCB5 846 aaPredicted RBP9.45□□□□□ -0.9
PALB2-203ENST00000565038 RIC3Q7Z5B4 369 aa9.45□□□□□ -0.9
PALB2-203ENST00000565038 NKX2-3Q8TAU0 364 aa9.45□□□□□ -0.9
PALB2-203ENST00000565038 RSPH6AQ9H0K4 717 aa9.45□□□□□ -0.9
PALB2-203ENST00000565038 PCDHGC3Q9UN70 934 aa9.45□□□□□ -0.9
PALB2-203ENST00000565038 CSPP1Q1MSJ5 1256 aa9.44□□□□□ -0.9
PALB2-203ENST00000565038 RNF19BQ6ZMZ0 732 aa9.44□□□□□ -0.9
PALB2-203ENST00000565038 LIMD1Q9UGP4 676 aa9.44□□□□□ -0.9
PALB2-203ENST00000565038 SPTLC1O15269 473 aa9.43□□□□□ -0.9
PALB2-203ENST00000565038 SYMPKQ92797 1274 aaKnown RBP9.43□□□□□ -0.9
PALB2-203ENST00000565038 ATP1B4Q9UN42 357 aaPredicted RBP9.43□□□□□ -0.9
PALB2-203ENST00000565038 PCDHB15Q9Y5E8 787 aa9.43□□□□□ -0.9
PALB2-203ENST00000565038 SH3D19Q5HYK7 790 aa9.42□□□□□ -0.9
PALB2-203ENST00000565038 THAP11Q96EK4 314 aa9.42□□□□□ -0.9
PALB2-203ENST00000565038 FMNL1O95466 1100 aaPredicted RBP9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms